RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 LAMB4A4D0S4 1761 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 UBR2Q8IWV8 1755 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 RGS12O14924 1447 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 ITGB4P16144 1822 aa15.15■□□□□ 0.02
POLR2J3-211ENST00000506060 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
POLR2J3-211ENST00000506060 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
POLR2J3-211ENST00000506060 BCL9O00512 1426 aa15.14■□□□□ 0.01
POLR2J3-211ENST00000506060 KDM2BQ8NHM5 1336 aa15.14■□□□□ 0.01
POLR2J3-211ENST00000506060 GNAI3P08754 354 aa15.13■□□□□ 0.01
POLR2J3-211ENST00000506060 PIGBQ92521 554 aa15.13■□□□□ 0.01
POLR2J3-211ENST00000506060 SYTL4Q96C24 671 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-211ENST00000506060 C5P01031 1676 aa15.12■□□□□ 0.01
POLR2J3-211ENST00000506060 N4BP2Q86UW6 1770 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-211ENST00000506060 HDAC1Q13547 482 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-211ENST00000506060 DNAAF4Q8WXU2 420 aa15.12■□□□□ 0.01
POLR2J3-211ENST00000506060 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-211ENST00000506060 PHAXQ9H814 394 aaKnown RBP15.12■□□□□ 0.01
POLR2J3-211ENST00000506060 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
POLR2J3-211ENST00000506060 F6X3S4 739 aa15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 PTCD1O75127 700 aaKnown RBP15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 STARD3NLO95772 234 aa15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 KSR2Q6VAB6 950 aa15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 SMARCC1Q92922 1105 aaPredicted RBP15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 SRCIN1Q9C0H9 1055 aa15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 PCDHB15Q9Y5E8 787 aa15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
POLR2J3-211ENST00000506060 ATRNO75882 1429 aa15.1■□□□□ 0.01
POLR2J3-211ENST00000506060 NEXNQ0ZGT2 675 aa15.1■□□□□ 0.01
POLR2J3-211ENST00000506060 ATG3Q9NT62 314 aa15.1■□□□□ 0.01
POLR2J3-211ENST00000506060 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
POLR2J3-211ENST00000506060 ATP10DQ9P241 1426 aa15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 PRAMEF22A3QJZ6 481 aa15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 PI4KAP2A4QPH2 592 aa15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 ALDH1L1O75891 902 aa15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 RPAP2Q8IXW5 612 aaPredicted RBP15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 PI4KAP1Q8N8J0 262 aa15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 ASAP1Q9ULH1 1129 aa15.09■□□□□ 0.01
POLR2J3-211ENST00000506060 HMMRO75330 724 aa15.08■□□□□ 0
POLR2J3-211ENST00000506060 MYL6BP14649 208 aa15.08■□□□□ 0
POLR2J3-211ENST00000506060 PDIA6Q15084 440 aa15.08■□□□□ 0
POLR2J3-211ENST00000506060 RIC3Q7Z5B4 369 aa15.08■□□□□ 0
POLR2J3-211ENST00000506060 THSD7AQ9UPZ6 1657 aa15.08■□□□□ 0
POLR2J3-211ENST00000506060 IGHDP01880 384 aa15.07■□□□□ 0
POLR2J3-211ENST00000506060 ANXA1P04083 346 aa15.07■□□□□ 0
POLR2J3-211ENST00000506060 GNAI2P04899 355 aa15.07■□□□□ 0
POLR2J3-211ENST00000506060 AIMP1Q12904 312 aaKnown RBP15.07■□□□□ 0
POLR2J3-211ENST00000506060 PROSER3Q2NL68 480 aa15.07■□□□□ 0
POLR2J3-211ENST00000506060 ZNF772Q68DY9 489 aaPredicted RBP15.07■□□□□ 0
POLR2J3-211ENST00000506060 NPM2Q86SE8 214 aaKnown RBP15.07■□□□□ 0
POLR2J3-211ENST00000506060 QTRT2Q9H974 415 aaKnown RBP15.07■□□□□ 0
POLR2J3-211ENST00000506060 MAP3K2Q9Y2U5 619 aa15.07■□□□□ 0
POLR2J3-211ENST00000506060 ONECUT3O60422 494 aaPredicted RBP15.06■□□□□ 0
POLR2J3-211ENST00000506060 UBTFL1P0CB47 393 aaPredicted RBP15.06■□□□□ 0
POLR2J3-211ENST00000506060 ANKRD13DQ6ZTN6 518 aa15.06■□□□□ 0
POLR2J3-211ENST00000506060 COPS6Q7L5N1 327 aa15.06■□□□□ 0
POLR2J3-211ENST00000506060 XAGE3Q8WTP9 111 aa15.06■□□□□ 0
POLR2J3-211ENST00000506060 GCC1Q96CN9 775 aa15.06■□□□□ 0
POLR2J3-211ENST00000506060 ADCY9O60503 1353 aa15.06■□□□□ 0
POLR2J3-211ENST00000506060 IBTKQ9P2D0 1353 aaPredicted RBP15.06■□□□□ 0
POLR2J3-211ENST00000506060 GLI3P10071 1580 aa15.06■□□□□ 0
POLR2J3-211ENST00000506060 BEND3Q5T5X7 828 aa15.05■□□□□ -0
POLR2J3-211ENST00000506060 ANKRD44Q8N8A2 993 aa15.05■□□□□ -0
POLR2J3-211ENST00000506060 LINS1Q8NG48 757 aa15.05■□□□□ -0
POLR2J3-211ENST00000506060 ACSBG1Q96GR2 724 aa15.05■□□□□ -0
POLR2J3-211ENST00000506060 MEIS3Q99687 375 aa15.05■□□□□ -0
POLR2J3-211ENST00000506060 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
POLR2J3-211ENST00000506060 PLBD2Q8NHP8 589 aa15.04■□□□□ -0
POLR2J3-211ENST00000506060 DNAJC10Q8IXB1 793 aa15.03■□□□□ -0
POLR2J3-211ENST00000506060 SMC5Q8IY18 1101 aa15.03■□□□□ -0
POLR2J3-211ENST00000506060 METTL22Q9BUU2 404 aaPredicted RBP15.03■□□□□ -0
POLR2J3-211ENST00000506060 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
POLR2J3-211ENST00000506060 C9orf78Q9NZ63 289 aaPredicted RBP15.03■□□□□ -0
POLR2J3-211ENST00000506060 A1BGP04217 495 aa15.02■□□□□ -0
POLR2J3-211ENST00000506060 KIF6Q6ZMV9 814 aa15.02■□□□□ -0
POLR2J3-211ENST00000506060 SEPT12Q8IYM1 358 aa15.02■□□□□ -0
POLR2J3-211ENST00000506060 USP44Q9H0E7 712 aa15.02■□□□□ -0
POLR2J3-211ENST00000506060 PALLDQ8WX93 1383 aa15.01□□□□□ -0.01
POLR2J3-211ENST00000506060 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
POLR2J3-211ENST00000506060 CEP85Q6P2H3 762 aa15.01□□□□□ -0.01
POLR2J3-211ENST00000506060 LRP10Q7Z4F1 713 aa15.01□□□□□ -0.01
POLR2J3-211ENST00000506060 LOC102724428A0A0B4J2F2 783 aa15□□□□□ -0.01
POLR2J3-211ENST00000506060 NBPF26B4DH59 902 aa15□□□□□ -0.01
POLR2J3-211ENST00000506060 CYP19A1P11511 503 aaPredicted RBP15□□□□□ -0.01
POLR2J3-211ENST00000506060 SIK1P57059 783 aa15□□□□□ -0.01
POLR2J3-211ENST00000506060 NBPF14Q5TI25 921 aa15□□□□□ -0.01
POLR2J3-211ENST00000506060 NBPF10Q6P3W6 841 aaKnown RBP15□□□□□ -0.01
POLR2J3-211ENST00000506060 NBPF15Q8N660 670 aa15□□□□□ -0.01
POLR2J3-211ENST00000506060 FBXO41Q8TF61 875 aa15□□□□□ -0.01
POLR2J3-211ENST00000506060 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
POLR2J3-211ENST00000506060 ATP6V1AP38606 617 aa14.99□□□□□ -0.01
POLR2J3-211ENST00000506060 RBM6P78332 1123 aaKnown RBP14.99□□□□□ -0.01
POLR2J3-211ENST00000506060 MYD88Q99836 296 aa14.99□□□□□ -0.01
POLR2J3-211ENST00000506060 ZNF831Q5JPB2 1677 aa14.99□□□□□ -0.01
POLR2J3-211ENST00000506060 NHSQ6T4R5 1651 aa14.99□□□□□ -0.01
POLR2J3-211ENST00000506060 CICQ96RK0 1608 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-211ENST00000506060 GRM8O00222 908 aa14.98□□□□□ -0.01
POLR2J3-211ENST00000506060 IL6STP40189 918 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms