RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 NARFQ9UHQ1 456 aa15.34■□□□□ 0.05
SIL1-208ENST00000505945 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
SIL1-208ENST00000505945 NFIXQ14938 502 aa15.33■□□□□ 0.04
SIL1-208ENST00000505945 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
SIL1-208ENST00000505945 IL17REQ8NFR9 667 aa15.33■□□□□ 0.04
SIL1-208ENST00000505945 C9orf131Q5VYM1 1079 aa15.32■□□□□ 0.04
SIL1-208ENST00000505945 TTC5Q8N0Z6 440 aa15.32■□□□□ 0.04
SIL1-208ENST00000505945 BCL2L12Q9HB09 334 aa15.32■□□□□ 0.04
SIL1-208ENST00000505945 COL15A1P39059 1388 aa15.32■□□□□ 0.04
SIL1-208ENST00000505945 NPC1L1Q9UHC9 1359 aa15.32■□□□□ 0.04
SIL1-208ENST00000505945 COL3A1P02461 1466 aaPredicted RBP15.32■□□□□ 0.04
SIL1-208ENST00000505945 GNAT3A8MTJ3 354 aa15.31■□□□□ 0.04
SIL1-208ENST00000505945 TEFQ10587 303 aa15.31■□□□□ 0.04
SIL1-208ENST00000505945 NMRK2Q9NPI5 230 aa15.31■□□□□ 0.04
SIL1-208ENST00000505945 STARD3NLO95772 234 aa15.3■□□□□ 0.04
SIL1-208ENST00000505945 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
SIL1-208ENST00000505945 ZNF496Q96IT1 587 aaPredicted RBP15.3■□□□□ 0.04
SIL1-208ENST00000505945 ARFGEF1Q9Y6D6 1849 aa15.3■□□□□ 0.04
SIL1-208ENST00000505945 TOMM70O94826 608 aa15.29■□□□□ 0.04
SIL1-208ENST00000505945 SERPINB2P05120 415 aa15.29■□□□□ 0.04
SIL1-208ENST00000505945 EIF5P55010 431 aaKnown RBP15.29■□□□□ 0.04
SIL1-208ENST00000505945 ZNF790Q6PG37 636 aa15.29■□□□□ 0.04
SIL1-208ENST00000505945 PHACTR3Q96KR7 559 aa15.29■□□□□ 0.04
SIL1-208ENST00000505945 BICDL1Q6ZP65 573 aa15.28■□□□□ 0.04
SIL1-208ENST00000505945 RNF181Q9P0P0 153 aa15.28■□□□□ 0.04
SIL1-208ENST00000505945 UBR2Q8IWV8 1755 aa15.28■□□□□ 0.04
SIL1-208ENST00000505945 AFDNP55196 1824 aaKnown RBP15.27■□□□□ 0.04
SIL1-208ENST00000505945 ZNF330Q9Y3S2 320 aaPredicted RBP15.27■□□□□ 0.04
SIL1-208ENST00000505945 HEG1Q9ULI3 1381 aa15.26■□□□□ 0.03
SIL1-208ENST00000505945 A0A087WZG4 1122 aa15.26■□□□□ 0.03
SIL1-208ENST00000505945 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
SIL1-208ENST00000505945 CFAP53Q96M91 514 aa15.26■□□□□ 0.03
SIL1-208ENST00000505945 TEX13AQ9BXU3 409 aaPredicted RBP15.26■□□□□ 0.03
SIL1-208ENST00000505945 TBC1D2BQ9UPU7 963 aa15.26■□□□□ 0.03
SIL1-208ENST00000505945 KCNQ3O43525 872 aa15.25■□□□□ 0.03
SIL1-208ENST00000505945 A1BGP04217 495 aa15.25■□□□□ 0.03
SIL1-208ENST00000505945 TBC1D9BQ66K14 1250 aa15.25■□□□□ 0.03
SIL1-208ENST00000505945 C2CD5Q86YS7 1000 aa15.25■□□□□ 0.03
SIL1-208ENST00000505945 FMNL2Q96PY5 1086 aa15.25■□□□□ 0.03
SIL1-208ENST00000505945 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
SIL1-208ENST00000505945 NRXN2Q9P2S2 1712 aa15.24■□□□□ 0.03
SIL1-208ENST00000505945 BTBD11A6QL63 1104 aa15.24■□□□□ 0.03
SIL1-208ENST00000505945 H0YIN7 160 aa15.24■□□□□ 0.03
SIL1-208ENST00000505945 RASSF7Q02833 373 aa15.24■□□□□ 0.03
SIL1-208ENST00000505945 TTLL6Q8N841 843 aa15.24■□□□□ 0.03
SIL1-208ENST00000505945 CARMIL3Q8ND23 1372 aa15.24■□□□□ 0.03
SIL1-208ENST00000505945 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
SIL1-208ENST00000505945 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
SIL1-208ENST00000505945 SBF1O95248 1867 aa15.23■□□□□ 0.03
SIL1-208ENST00000505945 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
SIL1-208ENST00000505945 APLP1P51693 650 aa15.23■□□□□ 0.03
SIL1-208ENST00000505945 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
SIL1-208ENST00000505945 C16orf71Q8IYS4 520 aaPredicted RBP15.23■□□□□ 0.03
SIL1-208ENST00000505945 CCDC24Q8N4L8 307 aa15.23■□□□□ 0.03
SIL1-208ENST00000505945 RRAGCQ9HB90 399 aa15.23■□□□□ 0.03
SIL1-208ENST00000505945 NUDCQ9Y266 331 aa15.23■□□□□ 0.03
SIL1-208ENST00000505945 SIPA1L3O60292 1781 aaPredicted RBP15.23■□□□□ 0.03
SIL1-208ENST00000505945 PPP2R1AP30153 589 aa15.22■□□□□ 0.03
SIL1-208ENST00000505945 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
SIL1-208ENST00000505945 PRELPP51888 382 aa15.21■□□□□ 0.03
SIL1-208ENST00000505945 MCM10Q7L590 875 aa15.21■□□□□ 0.03
SIL1-208ENST00000505945 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
SIL1-208ENST00000505945 RBM46Q8TBY0 533 aaKnown RBP15.21■□□□□ 0.03
SIL1-208ENST00000505945 USP16Q9Y5T5 823 aa15.21■□□□□ 0.03
SIL1-208ENST00000505945 PIP4K2AP48426 406 aaPredicted RBP15.2■□□□□ 0.02
SIL1-208ENST00000505945 PRR5LQ6MZQ0 368 aa15.2■□□□□ 0.02
SIL1-208ENST00000505945 DNAJC5GQ8N7S2 189 aa15.2■□□□□ 0.02
SIL1-208ENST00000505945 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
SIL1-208ENST00000505945 ZNF622Q969S3 477 aaKnown RBP eCLIP15.2■□□□□ 0.022e-6■■■□□ 14.6
SIL1-208ENST00000505945 BRIP1Q9BX63 1249 aa15.2■□□□□ 0.02
SIL1-208ENST00000505945 PRAMEF22A3QJZ6 481 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 LMNB1P20700 586 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 PDE6BP35913 854 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 IFFO2Q5TF58 517 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 SETDB2Q96T68 719 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
SIL1-208ENST00000505945 DLEC1Q9Y238 1755 aa15.19■□□□□ 0.02
SIL1-208ENST00000505945 NFKBIEO00221 500 aa15.18■□□□□ 0.02
SIL1-208ENST00000505945 DZIP3Q86Y13 1208 aaKnown RBP15.18■□□□□ 0.02
SIL1-208ENST00000505945 ANKRD31Q8N7Z5 1873 aa15.17■□□□□ 0.02
SIL1-208ENST00000505945 HTRA3P83110 453 aa15.17■□□□□ 0.02
SIL1-208ENST00000505945 FSTL1Q12841 308 aa15.17■□□□□ 0.02
SIL1-208ENST00000505945 ZC3H4Q9UPT8 1303 aaKnown RBP15.17■□□□□ 0.02
SIL1-208ENST00000505945 SCN7AQ01118 1682 aa15.16■□□□□ 0.02
SIL1-208ENST00000505945 GLTPD2A6NH11 291 aa15.16■□□□□ 0.02
SIL1-208ENST00000505945 NPHP1O15259 732 aa15.16■□□□□ 0.02
SIL1-208ENST00000505945 C21orf2O43822 256 aa15.16■□□□□ 0.02
SIL1-208ENST00000505945 SNRPA1P09661 255 aaKnown RBP15.16■□□□□ 0.02
SIL1-208ENST00000505945 CNBD1Q8NA66 436 aa15.16■□□□□ 0.02
SIL1-208ENST00000505945 PDZRN3Q9UPQ7 1066 aa15.16■□□□□ 0.02
SIL1-208ENST00000505945 CCDC88AQ3V6T2 1871 aa15.15■□□□□ 0.02
SIL1-208ENST00000505945 NBPF26B4DH59 902 aa15.14■□□□□ 0.01
SIL1-208ENST00000505945 HTATSF1O43719 755 aaKnown RBP15.14■□□□□ 0.01
SIL1-208ENST00000505945 VEGFAP15692 232 aaPredicted RBP15.14■□□□□ 0.01
SIL1-208ENST00000505945 NBPF10Q6P3W6 841 aaKnown RBP15.14■□□□□ 0.01
SIL1-208ENST00000505945 NBPF15Q8N660 670 aa15.14■□□□□ 0.01
SIL1-208ENST00000505945 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
SIL1-208ENST00000505945 TNRC6CQ9HCJ0 1690 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms