RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 COL3A1P02461 1466 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-215ENST00000505814 A0A0G2JS52 829 aa12.42□□□□□ -0.42
PTPN20-215ENST00000505814 IL2RBP14784 551 aa12.42□□□□□ -0.42
PTPN20-215ENST00000505814 PSEN2P49810 448 aa12.42□□□□□ -0.42
PTPN20-215ENST00000505814 MYT1Q01538 1121 aa12.42□□□□□ -0.42
PTPN20-215ENST00000505814 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
PTPN20-215ENST00000505814 HSP90AB2PQ58FF8 381 aa12.42□□□□□ -0.42
PTPN20-215ENST00000505814 LY75O60449 1722 aa12.41□□□□□ -0.42
PTPN20-215ENST00000505814 CSB-PGBD3P0DP91 1061 aa12.41□□□□□ -0.42
PTPN20-215ENST00000505814 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
PTPN20-215ENST00000505814 ZNF454Q8N9F8 522 aa12.41□□□□□ -0.42
PTPN20-215ENST00000505814 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
PTPN20-215ENST00000505814 NLRP2Q9NX02 1062 aa12.41□□□□□ -0.42
PTPN20-215ENST00000505814 TK2O00142 265 aa12.4□□□□□ -0.42
PTPN20-215ENST00000505814 BAG6P46379 1132 aa12.4□□□□□ -0.42
PTPN20-215ENST00000505814 AMPHP49418 695 aa12.4□□□□□ -0.42
PTPN20-215ENST00000505814 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
PTPN20-215ENST00000505814 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
PTPN20-215ENST00000505814 CASZ1Q86V15 1759 aa12.4□□□□□ -0.42
PTPN20-215ENST00000505814 EVI5O60447 810 aa12.39□□□□□ -0.43
PTPN20-215ENST00000505814 TRIM37O94972 964 aa12.39□□□□□ -0.43
PTPN20-215ENST00000505814 DMRTA1Q5VZB9 504 aa12.39□□□□□ -0.43
PTPN20-215ENST00000505814 PTF1AQ7RTS3 328 aa12.39□□□□□ -0.43
PTPN20-215ENST00000505814 KDRP35968 1356 aa12.39□□□□□ -0.43
PTPN20-215ENST00000505814 IGSF1Q8N6C5 1336 aa12.38□□□□□ -0.43
PTPN20-215ENST00000505814 PLSCR1O15162 318 aa12.38□□□□□ -0.43
PTPN20-215ENST00000505814 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
PTPN20-215ENST00000505814 QSER1Q2KHR3 1735 aa12.37□□□□□ -0.43
PTPN20-215ENST00000505814 EXOC5O00471 708 aa12.37□□□□□ -0.43
PTPN20-215ENST00000505814 FOSBP53539 338 aa12.37□□□□□ -0.43
PTPN20-215ENST00000505814 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-215ENST00000505814 ADAMTS7Q9UKP4 1686 aa12.37□□□□□ -0.43
PTPN20-215ENST00000505814 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
PTPN20-215ENST00000505814 EIF4A2Q14240 407 aaKnown RBP12.36□□□□□ -0.43
PTPN20-215ENST00000505814 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
PTPN20-215ENST00000505814 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
PTPN20-215ENST00000505814 EZH2Q15910 746 aaKnown RBP12.35□□□□□ -0.43
PTPN20-215ENST00000505814 LTV1Q96GA3 475 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-215ENST00000505814 EYA1Q99502 592 aa12.35□□□□□ -0.43
PTPN20-215ENST00000505814 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
PTPN20-215ENST00000505814 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
PTPN20-215ENST00000505814 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-215ENST00000505814 COL24A1Q17RW2 1714 aa12.34□□□□□ -0.43
PTPN20-215ENST00000505814 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-215ENST00000505814 SPRYD3Q8NCJ5 442 aa12.34□□□□□ -0.43
PTPN20-215ENST00000505814 POLR3GLQ9BT43 218 aa12.34□□□□□ -0.43
PTPN20-215ENST00000505814 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
PTPN20-215ENST00000505814 ITGB4P16144 1822 aa12.34□□□□□ -0.43
PTPN20-215ENST00000505814 ZNF831Q5JPB2 1677 aa12.33□□□□□ -0.44
PTPN20-215ENST00000505814 APBA3O96018 575 aa12.33□□□□□ -0.44
PTPN20-215ENST00000505814 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
PTPN20-215ENST00000505814 CYP27B1O15528 508 aa12.32□□□□□ -0.44
PTPN20-215ENST00000505814 KCNQ2O43526 872 aa12.32□□□□□ -0.44
PTPN20-215ENST00000505814 HRO43593 1189 aa12.32□□□□□ -0.44
PTPN20-215ENST00000505814 ZCRB1Q8TBF4 217 aaKnown RBP12.32□□□□□ -0.44
PTPN20-215ENST00000505814 PCDH11XQ9BZA7 1347 aa12.32□□□□□ -0.44
PTPN20-215ENST00000505814 PCDH11YQ9BZA8 1340 aa12.32□□□□□ -0.44
PTPN20-215ENST00000505814 TUBGCP6Q96RT7 1819 aa12.32□□□□□ -0.44
PTPN20-215ENST00000505814 IL13P35225 146 aa12.31□□□□□ -0.44
PTPN20-215ENST00000505814 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
PTPN20-215ENST00000505814 MRC1P22897 1456 aa12.3□□□□□ -0.44
PTPN20-215ENST00000505814 PTPREP23469 700 aa12.3□□□□□ -0.44
PTPN20-215ENST00000505814 ZDHHC16Q969W1 377 aa12.3□□□□□ -0.44
PTPN20-215ENST00000505814 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
PTPN20-215ENST00000505814 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-215ENST00000505814 RAPGEF4Q8WZA2 1011 aa12.29□□□□□ -0.44
PTPN20-215ENST00000505814 C5P01031 1676 aa12.29□□□□□ -0.44
PTPN20-215ENST00000505814 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
PTPN20-215ENST00000505814 CAMK2BQ13554 666 aa12.28□□□□□ -0.44
PTPN20-215ENST00000505814 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
PTPN20-215ENST00000505814 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
PTPN20-215ENST00000505814 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
PTPN20-215ENST00000505814 HCSTQ9UBK5 93 aa12.27□□□□□ -0.45
PTPN20-215ENST00000505814 MTHFSP49914 203 aa12.26□□□□□ -0.45
PTPN20-215ENST00000505814 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
PTPN20-215ENST00000505814 AEBP1Q8IUX7 1158 aa12.26□□□□□ -0.45
PTPN20-215ENST00000505814 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
PTPN20-215ENST00000505814 SLC4A5Q9BY07 1137 aa12.26□□□□□ -0.45
PTPN20-215ENST00000505814 ADAM33Q9BZ11 813 aa12.26□□□□□ -0.45
PTPN20-215ENST00000505814 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
PTPN20-215ENST00000505814 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-215ENST00000505814 PHKG2P15735 406 aa12.25□□□□□ -0.45
PTPN20-215ENST00000505814 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
PTPN20-215ENST00000505814 LRRC4BQ9NT99 713 aa12.25□□□□□ -0.45
PTPN20-215ENST00000505814 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-215ENST00000505814 SIPA1L3O60292 1781 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-215ENST00000505814 PRIM1P49642 420 aaKnown RBP12.24□□□□□ -0.45
PTPN20-215ENST00000505814 R3HDM1Q15032 1099 aaKnown RBP12.24□□□□□ -0.45
PTPN20-215ENST00000505814 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
PTPN20-215ENST00000505814 SLC27A3Q5K4L6 730 aa12.23□□□□□ -0.45
PTPN20-215ENST00000505814 SPG7Q9UQ90 795 aa12.23□□□□□ -0.45
PTPN20-215ENST00000505814 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
PTPN20-215ENST00000505814 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
PTPN20-215ENST00000505814 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
PTPN20-215ENST00000505814 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
PTPN20-215ENST00000505814 TJP1Q07157 1748 aa12.22□□□□□ -0.45
PTPN20-215ENST00000505814 PHF14O94880 888 aa12.21□□□□□ -0.45
PTPN20-215ENST00000505814 ZNF827Q17R98 1081 aa12.21□□□□□ -0.45
PTPN20-215ENST00000505814 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.45
PTPN20-215ENST00000505814 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms