RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 ARHGAP27Q6ZUM4 889 aa33.12■■■□□ 2.89
HERC4-212ENST00000505760 POLRMTO00411 1230 aaKnown RBP33.11■■■□□ 2.89
HERC4-212ENST00000505760 TM4SF1P30408 202 aa33.11■■■□□ 2.89
HERC4-212ENST00000505760 IL17REQ8NFR9 667 aa33.11■■■□□ 2.89
HERC4-212ENST00000505760 NARFQ9UHQ1 456 aa33.11■■■□□ 2.89
HERC4-212ENST00000505760 KCNA3P22001 575 aa33.1■■■□□ 2.89
HERC4-212ENST00000505760 PIM2Q9P1W9 311 aa33.1■■■□□ 2.89
HERC4-212ENST00000505760 STARD3NLO95772 234 aa33.09■■■□□ 2.89
HERC4-212ENST00000505760 NUDCQ9Y266 331 aa33.09■■■□□ 2.89
HERC4-212ENST00000505760 ARFGEF1Q9Y6D6 1849 aa33.09■■■□□ 2.89
HERC4-212ENST00000505760 SIPA1L3O60292 1781 aaPredicted RBP33.09■■■□□ 2.89
HERC4-212ENST00000505760 CANXP27824 592 aaKnown RBP33.08■■■□□ 2.89
HERC4-212ENST00000505760 PRKAR2BP31323 418 aa33.08■■■□□ 2.89
HERC4-212ENST00000505760 ZNF790Q6PG37 636 aa33.07■■■□□ 2.88
HERC4-212ENST00000505760 CEP350Q5VT06 3117 aa33.07■■■□□ 2.88
HERC4-212ENST00000505760 DALRD3Q5D0E6 543 aaKnown RBP33.06■■■□□ 2.88
HERC4-212ENST00000505760 ZNF496Q96IT1 587 aaPredicted RBP33.06■■■□□ 2.88
HERC4-212ENST00000505760 PHACTR3Q96KR7 559 aa33.06■■■□□ 2.88
HERC4-212ENST00000505760 RSPH6AQ9H0K4 717 aa33.06■■■□□ 2.88
HERC4-212ENST00000505760 AFDNP55196 1824 aaKnown RBP33.05■■■□□ 2.88
HERC4-212ENST00000505760 PPP2R1AP30153 589 aa33.04■■■□□ 2.88
HERC4-212ENST00000505760 NFIXQ14938 502 aa33.04■■■□□ 2.88
HERC4-212ENST00000505760 TEX13AQ9BXU3 409 aaPredicted RBP33.04■■■□□ 2.88
HERC4-212ENST00000505760 CHRNA5P30532 468 aa33.03■■■□□ 2.88
HERC4-212ENST00000505760 HEG1Q9ULI3 1381 aa33.03■■■□□ 2.88
HERC4-212ENST00000505760 U2AF1L5P0DN76 240 aaPredicted RBP33.02■■■□□ 2.88
HERC4-212ENST00000505760 U2AF1Q01081 240 aaKnown RBP eCLIP33.02■■■□□ 2.881e-6■■■■□ 20.1
HERC4-212ENST00000505760 CEMIPQ8WUJ3 1361 aa33.01■■■□□ 2.88
HERC4-212ENST00000505760 BCL2L12Q9HB09 334 aa33.01■■■□□ 2.87
HERC4-212ENST00000505760 A0A087WZG4 1122 aa33■■■□□ 2.87
HERC4-212ENST00000505760 EIF5P55010 431 aaKnown RBP33■■■□□ 2.87
HERC4-212ENST00000505760 FMNL2Q96PY5 1086 aa33■■■□□ 2.87
HERC4-212ENST00000505760 BTBD11A6QL63 1104 aa32.98■■■□□ 2.87
HERC4-212ENST00000505760 SERPINB2P05120 415 aa32.98■■■□□ 2.87
HERC4-212ENST00000505760 ZNF330Q9Y3S2 320 aaPredicted RBP32.98■■■□□ 2.87
HERC4-212ENST00000505760 NRXN2Q9P2S2 1712 aa32.97■■■□□ 2.87
HERC4-212ENST00000505760 KIF3CO14782 793 aa32.95■■■□□ 2.87
HERC4-212ENST00000505760 C9orf131Q5VYM1 1079 aa32.95■■■□□ 2.87
HERC4-212ENST00000505760 BICDL1Q6ZP65 573 aa32.95■■■□□ 2.87
HERC4-212ENST00000505760 RTF1Q92541 710 aaKnown RBP32.95■■■□□ 2.87
HERC4-212ENST00000505760 NPM2Q86SE8 214 aaKnown RBP32.94■■■□□ 2.86
HERC4-212ENST00000505760 KCNQ3O43525 872 aa32.92■■■□□ 2.86
HERC4-212ENST00000505760 IL6STP40189 918 aaPredicted RBP32.92■■■□□ 2.86
HERC4-212ENST00000505760 TBC1D2BQ9UPU7 963 aa32.91■■■□□ 2.86
HERC4-212ENST00000505760 SCN7AQ01118 1682 aa32.91■■■□□ 2.86
HERC4-212ENST00000505760 MCM10Q7L590 875 aa32.9■■■□□ 2.86
HERC4-212ENST00000505760 DLEC1Q9Y238 1755 aa32.89■■■□□ 2.86
HERC4-212ENST00000505760 A1BGP04217 495 aa32.89■■■□□ 2.86
HERC4-212ENST00000505760 HSPA6P17066 643 aa32.89■■■□□ 2.86
HERC4-212ENST00000505760 TBC1D9BQ66K14 1250 aa32.88■■■□□ 2.85
HERC4-212ENST00000505760 RNF181Q9P0P0 153 aa32.88■■■□□ 2.85
HERC4-212ENST00000505760 SBF1O95248 1867 aa32.87■■■□□ 2.85
HERC4-212ENST00000505760 C2CD5Q86YS7 1000 aa32.87■■■□□ 2.85
HERC4-212ENST00000505760 H0YIN7 160 aa32.86■■■□□ 2.85
HERC4-212ENST00000505760 CARMIL3Q8ND23 1372 aa32.85■■■□□ 2.85
HERC4-212ENST00000505760 TTLL6Q8N841 843 aa32.85■■■□□ 2.85
HERC4-212ENST00000505760 NMRK2Q9NPI5 230 aa32.85■■■□□ 2.85
HERC4-212ENST00000505760 HTATSF1O43719 755 aaKnown RBP32.84■■■□□ 2.85
HERC4-212ENST00000505760 DCTN1Q14203 1278 aa32.84■■■□□ 2.85
HERC4-212ENST00000505760 USP16Q9Y5T5 823 aa32.84■■■□□ 2.85
HERC4-212ENST00000505760 NEFMP07197 916 aa32.83■■■□□ 2.85
HERC4-212ENST00000505760 TOMM70O94826 608 aa32.82■■■□□ 2.84
HERC4-212ENST00000505760 SNRPA1P09661 255 aaKnown RBP32.82■■■□□ 2.84
HERC4-212ENST00000505760 CAMTA2O94983 1202 aa32.81■■■□□ 2.84
HERC4-212ENST00000505760 SETDB2Q96T68 719 aa32.81■■■□□ 2.84
HERC4-212ENST00000505760 ANKRD31Q8N7Z5 1873 aa32.8■■■□□ 2.84
HERC4-212ENST00000505760 PRAMEF22A3QJZ6 481 aa32.8■■■□□ 2.84
HERC4-212ENST00000505760 NPHP1O15259 732 aa32.8■■■□□ 2.84
HERC4-212ENST00000505760 DZIP3Q86Y13 1208 aaKnown RBP32.8■■■□□ 2.84
HERC4-212ENST00000505760 KDM2BQ8NHM5 1336 aa32.79■■■□□ 2.84
HERC4-212ENST00000505760 BCORQ6W2J9 1755 aa32.79■■■□□ 2.84
HERC4-212ENST00000505760 PDE6BP35913 854 aa32.79■■■□□ 2.84
HERC4-212ENST00000505760 PIP4K2AP48426 406 aaPredicted RBP32.79■■■□□ 2.84
HERC4-212ENST00000505760 RASSF7Q02833 373 aa32.79■■■□□ 2.84
HERC4-212ENST00000505760 PRR5LQ6MZQ0 368 aa32.79■■■□□ 2.84
HERC4-212ENST00000505760 BRIP1Q9BX63 1249 aa32.79■■■□□ 2.84
HERC4-212ENST00000505760 PDZRN3Q9UPQ7 1066 aa32.78■■■□□ 2.84
HERC4-212ENST00000505760 TAF7Q15545 349 aaPredicted RBP32.77■■■□□ 2.84
HERC4-212ENST00000505760 CCDC24Q8N4L8 307 aa32.77■■■□□ 2.84
HERC4-212ENST00000505760 DLG5Q8TDM6 1919 aa32.77■■■□□ 2.84
HERC4-212ENST00000505760 C16orf71Q8IYS4 520 aaPredicted RBP32.76■■■□□ 2.83
HERC4-212ENST00000505760 CNBD1Q8NA66 436 aa32.76■■■□□ 2.83
HERC4-212ENST00000505760 ZNF622Q969S3 477 aaKnown RBP eCLIP32.76■■■□□ 2.83
HERC4-212ENST00000505760 LMNB1P20700 586 aa32.75■■■□□ 2.83
HERC4-212ENST00000505760 ST5P78524 1137 aa32.73■■■□□ 2.83
HERC4-212ENST00000505760 CCDC88AQ3V6T2 1871 aa32.73■■■□□ 2.83
HERC4-212ENST00000505760 COL11A2P13942 1736 aaPredicted RBP32.72■■■□□ 2.83
HERC4-212ENST00000505760 MIS18AQ9NYP9 233 aa32.72■■■□□ 2.83
HERC4-212ENST00000505760 ZNF652Q9Y2D9 606 aa32.72■■■□□ 2.83
HERC4-212ENST00000505760 ZC3H4Q9UPT8 1303 aaKnown RBP32.72■■■□□ 2.83
HERC4-212ENST00000505760 CLEC4GQ6UXB4 293 aa32.71■■■□□ 2.83
HERC4-212ENST00000505760 TNRC6CQ9HCJ0 1690 aaKnown RBP32.71■■■□□ 2.83
HERC4-212ENST00000505760 RBM46Q8TBY0 533 aaKnown RBP32.7■■■□□ 2.83
HERC4-212ENST00000505760 APLP1P51693 650 aa32.69■■■□□ 2.82
HERC4-212ENST00000505760 RRAGCQ9HB90 399 aa32.69■■■□□ 2.82
HERC4-212ENST00000505760 NBPF26B4DH59 902 aa32.68■■■□□ 2.82
HERC4-212ENST00000505760 NBPF10Q6P3W6 841 aaKnown RBP32.68■■■□□ 2.82
HERC4-212ENST00000505760 NBPF5PQ86XG9 351 aaPredicted RBP32.68■■■□□ 2.82
HERC4-212ENST00000505760 NBPF15Q8N660 670 aa32.68■■■□□ 2.82
HERC4-212ENST00000505760 PNISRQ8TF01 805 aaKnown RBP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms