RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 HEG1Q9ULI3 1381 aa10.15□□□□□ -0.78
COL4A5-208ENST00000505728 IL2RBP14784 551 aa10.15□□□□□ -0.78
COL4A5-208ENST00000505728 CCT4P50991 539 aaKnown RBP10.15□□□□□ -0.78
COL4A5-208ENST00000505728 FAM196AQ6ZSG2 479 aa10.15□□□□□ -0.78
COL4A5-208ENST00000505728 BARGINQ6ZT62 677 aa10.15□□□□□ -0.78
COL4A5-208ENST00000505728 G2E3Q7L622 706 aa10.15□□□□□ -0.78
COL4A5-208ENST00000505728 PKD1L3Q7Z443 1732 aa10.15□□□□□ -0.78
COL4A5-208ENST00000505728 SIPA1L3O60292 1781 aaPredicted RBP10.14□□□□□ -0.79
COL4A5-208ENST00000505728 CYP27B1O15528 508 aa10.14□□□□□ -0.79
COL4A5-208ENST00000505728 KCNQ3O43525 872 aa10.14□□□□□ -0.79
COL4A5-208ENST00000505728 GIGYF1O75420 1035 aaPredicted RBP10.14□□□□□ -0.79
COL4A5-208ENST00000505728 FLIIQ13045 1269 aa10.14□□□□□ -0.79
COL4A5-208ENST00000505728 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
COL4A5-208ENST00000505728 SMC5Q8IY18 1101 aa10.14□□□□□ -0.79
COL4A5-208ENST00000505728 PDZRN3Q9UPQ7 1066 aa10.14□□□□□ -0.79
COL4A5-208ENST00000505728 PCDH11XQ9BZA7 1347 aa10.13□□□□□ -0.79
COL4A5-208ENST00000505728 PCDH11YQ9BZA8 1340 aa10.13□□□□□ -0.79
COL4A5-208ENST00000505728 ERVV-2B6SEH9 535 aa10.13□□□□□ -0.79
COL4A5-208ENST00000505728 APBA3O96018 575 aa10.13□□□□□ -0.79
COL4A5-208ENST00000505728 EIF2S2P20042 333 aaKnown RBP10.13□□□□□ -0.79
COL4A5-208ENST00000505728 PDE4AP27815 886 aa10.13□□□□□ -0.79
COL4A5-208ENST00000505728 KDM6AO15550 1401 aaPredicted RBP10.13□□□□□ -0.79
COL4A5-208ENST00000505728 RGPD3A6NKT7 1758 aaPredicted RBP10.13□□□□□ -0.79
COL4A5-208ENST00000505728 RGPD4Q7Z3J3 1758 aa10.13□□□□□ -0.79
COL4A5-208ENST00000505728 CABP4P57796 275 aa10.12□□□□□ -0.79
COL4A5-208ENST00000505728 FKBP5Q13451 457 aaPredicted RBP10.12□□□□□ -0.79
COL4A5-208ENST00000505728 ZNF790Q6PG37 636 aa10.12□□□□□ -0.79
COL4A5-208ENST00000505728 RPAP2Q8IXW5 612 aaPredicted RBP10.12□□□□□ -0.79
COL4A5-208ENST00000505728 NFATC2IPQ8NCF5 419 aa10.12□□□□□ -0.79
COL4A5-208ENST00000505728 GCC1Q96CN9 775 aa10.12□□□□□ -0.79
COL4A5-208ENST00000505728 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
COL4A5-208ENST00000505728 DBF4Q9UBU7 674 aaPredicted RBP10.12□□□□□ -0.79
COL4A5-208ENST00000505728 MRC1P22897 1456 aa10.11□□□□□ -0.79
COL4A5-208ENST00000505728 RGS3P49796 1198 aa10.11□□□□□ -0.79
COL4A5-208ENST00000505728 NECTIN2Q92692 538 aa10.11□□□□□ -0.79
COL4A5-208ENST00000505728 THRAP3Q9Y2W1 955 aaKnown RBP10.11□□□□□ -0.79
COL4A5-208ENST00000505728 GNAI3P08754 354 aa10.1□□□□□ -0.79
COL4A5-208ENST00000505728 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
COL4A5-208ENST00000505728 SKAP1Q86WV1 359 aa10.1□□□□□ -0.79
COL4A5-208ENST00000505728 TTC5Q8N0Z6 440 aa10.1□□□□□ -0.79
COL4A5-208ENST00000505728 ANKRD44Q8N8A2 993 aa10.1□□□□□ -0.79
COL4A5-208ENST00000505728 HYPKQ9NX55 129 aa10.1□□□□□ -0.79
COL4A5-208ENST00000505728 PXDNLA1KZ92 1463 aa10.1□□□□□ -0.79
COL4A5-208ENST00000505728 F6X3S4 739 aa10.09□□□□□ -0.79
COL4A5-208ENST00000505728 SNRPA1P09661 255 aaKnown RBP10.09□□□□□ -0.79
COL4A5-208ENST00000505728 NUCB1Q02818 461 aa10.09□□□□□ -0.79
COL4A5-208ENST00000505728 SLC39A6Q13433 755 aa10.09□□□□□ -0.79
COL4A5-208ENST00000505728 SLC4A10Q6U841 1118 aa10.09□□□□□ -0.79
COL4A5-208ENST00000505728 FMNL2Q96PY5 1086 aa10.09□□□□□ -0.79
COL4A5-208ENST00000505728 CDCA7Q9BWT1 371 aaPredicted RBP10.09□□□□□ -0.79
COL4A5-208ENST00000505728 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
COL4A5-208ENST00000505728 DDX21Q9NR30 783 aaKnown RBP eCLIP10.09□□□□□ -0.79
COL4A5-208ENST00000505728 CHPF2Q9P2E5 772 aa10.09□□□□□ -0.79
COL4A5-208ENST00000505728 CASZ1Q86V15 1759 aa10.09□□□□□ -0.79
COL4A5-208ENST00000505728 HMMRO75330 724 aa10.08□□□□□ -0.8
COL4A5-208ENST00000505728 PTF1AQ7RTS3 328 aa10.08□□□□□ -0.8
COL4A5-208ENST00000505728 SIRT2Q8IXJ6 389 aa10.08□□□□□ -0.8
COL4A5-208ENST00000505728 DNAAF4Q8WXU2 420 aa10.08□□□□□ -0.8
COL4A5-208ENST00000505728 DCTPP1Q9H773 170 aa10.08□□□□□ -0.8
COL4A5-208ENST00000505728 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
COL4A5-208ENST00000505728 KAT6BQ8WYB5 2073 aa10.07□□□□□ -0.8
COL4A5-208ENST00000505728 N4BP2Q86UW6 1770 aaPredicted RBP10.07□□□□□ -0.8
COL4A5-208ENST00000505728 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
COL4A5-208ENST00000505728 GNAI2P04899 355 aa10.07□□□□□ -0.8
COL4A5-208ENST00000505728 CEP85Q6P2H3 762 aa10.07□□□□□ -0.8
COL4A5-208ENST00000505728 KSR2Q6VAB6 950 aa10.07□□□□□ -0.8
COL4A5-208ENST00000505728 DDX54Q8TDD1 881 aaKnown RBP10.07□□□□□ -0.8
COL4A5-208ENST00000505728 ZNF496Q96IT1 587 aaPredicted RBP10.07□□□□□ -0.8
COL4A5-208ENST00000505728 MEIS3Q99687 375 aa10.07□□□□□ -0.8
COL4A5-208ENST00000505728 SRCIN1Q9C0H9 1055 aa10.07□□□□□ -0.8
COL4A5-208ENST00000505728 HDAC5Q9UQL6 1122 aa10.07□□□□□ -0.8
COL4A5-208ENST00000505728 PI4KAP2A4QPH2 592 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 EXOC5O00471 708 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 ALDH1L1O75891 902 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 ATP8B2P98198 1209 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 PDIA6Q15084 440 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 CHD1LQ86WJ1 897 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 PI4KAP1Q8N8J0 262 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 ATP10DQ9P241 1426 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 ERBB4Q15303 1308 aa10.06□□□□□ -0.8
COL4A5-208ENST00000505728 UTRNP46939 3433 aa10.05□□□□□ -0.8
COL4A5-208ENST00000505728 DDB1Q16531 1140 aa10.05□□□□□ -0.8
COL4A5-208ENST00000505728 C8orf34Q49A92 452 aa10.05□□□□□ -0.8
COL4A5-208ENST00000505728 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
COL4A5-208ENST00000505728 ANKRD45Q5TZF3 282 aa10.05□□□□□ -0.8
COL4A5-208ENST00000505728 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
COL4A5-208ENST00000505728 USP44Q9H0E7 712 aa10.05□□□□□ -0.8
COL4A5-208ENST00000505728 SHANK3Q9BYB0 1731 aa10.04□□□□□ -0.8
COL4A5-208ENST00000505728 IBTKQ9P2D0 1353 aaPredicted RBP10.04□□□□□ -0.8
COL4A5-208ENST00000505728 NHSQ6T4R5 1651 aa10.04□□□□□ -0.8
COL4A5-208ENST00000505728 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
COL4A5-208ENST00000505728 ANXA1P04083 346 aa10.04□□□□□ -0.8
COL4A5-208ENST00000505728 PROSER3Q2NL68 480 aa10.04□□□□□ -0.8
COL4A5-208ENST00000505728 NBPF14Q5TI25 921 aa10.04□□□□□ -0.8
COL4A5-208ENST00000505728 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
COL4A5-208ENST00000505728 USP16Q9Y5T5 823 aa10.04□□□□□ -0.8
COL4A5-208ENST00000505728 ADCY9O60503 1353 aa10.03□□□□□ -0.8
COL4A5-208ENST00000505728 BCL9O00512 1426 aa10.03□□□□□ -0.8
COL4A5-208ENST00000505728 PLSCR1O15162 318 aa10.03□□□□□ -0.8
COL4A5-208ENST00000505728 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms