RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 JMYQ8N9B5 988 aa10.23□□□□□ -0.77
VCAN-206ENST00000505615 OXER1Q8TDS5 423 aa10.23□□□□□ -0.77
VCAN-206ENST00000505615 KIAA1551Q9HCM1 1747 aa10.23□□□□□ -0.77
VCAN-206ENST00000505615 UBR3Q6ZT12 1888 aa10.23□□□□□ -0.77
VCAN-206ENST00000505615 TBC1D12O60347 775 aa10.22□□□□□ -0.77
VCAN-206ENST00000505615 NLRP2Q9NX02 1062 aa10.22□□□□□ -0.77
VCAN-206ENST00000505615 CENPJQ9HC77 1338 aaPredicted RBP10.22□□□□□ -0.77
VCAN-206ENST00000505615 RGPD2P0DJD1 1756 aa10.21□□□□□ -0.77
VCAN-206ENST00000505615 KIF13BQ9NQT8 1826 aa10.21□□□□□ -0.77
VCAN-206ENST00000505615 NBPF1Q3BBV0 1214 aa10.21□□□□□ -0.77
VCAN-206ENST00000505615 KLRG1Q96E93 195 aa10.21□□□□□ -0.77
VCAN-206ENST00000505615 IGSF1Q8N6C5 1336 aa10.21□□□□□ -0.78
VCAN-206ENST00000505615 TTC21AQ8NDW8 1320 aa10.21□□□□□ -0.78
VCAN-206ENST00000505615 ANKRD36BQ8N2N9 1353 aa10.21□□□□□ -0.78
VCAN-206ENST00000505615 TOMM70O94826 608 aa10.2□□□□□ -0.78
VCAN-206ENST00000505615 HTRA3P83110 453 aa10.2□□□□□ -0.78
VCAN-206ENST00000505615 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
VCAN-206ENST00000505615 TNS4Q8IZW8 715 aa10.2□□□□□ -0.78
VCAN-206ENST00000505615 KCNK17Q96T54 332 aa10.2□□□□□ -0.78
VCAN-206ENST00000505615 CRISPLD2Q9H0B8 497 aa10.2□□□□□ -0.78
VCAN-206ENST00000505615 BRCA1P38398 1863 aaKnown RBP10.19□□□□□ -0.78
VCAN-206ENST00000505615 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
VCAN-206ENST00000505615 KCTD12Q96CX2 325 aaKnown RBP10.19□□□□□ -0.78
VCAN-206ENST00000505615 CCNL1Q9UK58 526 aaPredicted RBP10.19□□□□□ -0.78
VCAN-206ENST00000505615 WWC3Q9ULE0 1092 aa10.19□□□□□ -0.78
VCAN-206ENST00000505615 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
VCAN-206ENST00000505615 USP31Q70CQ4 1352 aa10.18□□□□□ -0.78
VCAN-206ENST00000505615 ANKRD24Q8TF21 1146 aa10.18□□□□□ -0.78
VCAN-206ENST00000505615 VPS9D1Q9Y2B5 631 aa10.18□□□□□ -0.78
VCAN-206ENST00000505615 C4BP0C0L5 1744 aa10.18□□□□□ -0.78
VCAN-206ENST00000505615 PKD1L3Q7Z443 1732 aa10.18□□□□□ -0.78
VCAN-206ENST00000505615 RAB3GAP2Q9H2M9 1393 aa10.17□□□□□ -0.78
VCAN-206ENST00000505615 AMIGO3Q86WK7 504 aa10.17□□□□□ -0.78
VCAN-206ENST00000505615 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
VCAN-206ENST00000505615 SLC4A5Q9BY07 1137 aa10.17□□□□□ -0.78
VCAN-206ENST00000505615 NMRK2Q9NPI5 230 aa10.17□□□□□ -0.78
VCAN-206ENST00000505615 RBM46Q8TBY0 533 aaKnown RBP10.16□□□□□ -0.78
VCAN-206ENST00000505615 SYTL4Q96C24 671 aaPredicted RBP10.16□□□□□ -0.78
VCAN-206ENST00000505615 BCL2L12Q9HB09 334 aa10.16□□□□□ -0.78
VCAN-206ENST00000505615 MEGF6O75095 1541 aa10.16□□□□□ -0.78
VCAN-206ENST00000505615 MAP2P11137 1827 aaKnown RBP10.16□□□□□ -0.78
VCAN-206ENST00000505615 ITGB4P16144 1822 aa10.16□□□□□ -0.78
VCAN-206ENST00000505615 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
VCAN-206ENST00000505615 PXDNLA1KZ92 1463 aa10.15□□□□□ -0.78
VCAN-206ENST00000505615 KTN1Q86UP2 1357 aaKnown RBP10.14□□□□□ -0.79
VCAN-206ENST00000505615 USP47Q96K76 1375 aa10.14□□□□□ -0.79
VCAN-206ENST00000505615 CD163L1Q9NR16 1453 aa10.14□□□□□ -0.79
VCAN-206ENST00000505615 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
VCAN-206ENST00000505615 EVC2Q86UK5 1308 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 SBF1O95248 1867 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 TNRC6CQ9HCJ0 1690 aaKnown RBP10.13□□□□□ -0.79
VCAN-206ENST00000505615 FOSBP53539 338 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 PPP1R15BQ5SWA1 713 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 NME9Q86XW9 330 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 ZNF454Q8N9F8 522 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 FLAD1Q8NFF5 587 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 C10orf71Q711Q0 1435 aa10.13□□□□□ -0.79
VCAN-206ENST00000505615 BHMG1C9JSJ3 638 aaPredicted RBP10.12□□□□□ -0.79
VCAN-206ENST00000505615 FSTL1Q12841 308 aa10.11□□□□□ -0.79
VCAN-206ENST00000505615 SMIM5Q71RC9 77 aa10.11□□□□□ -0.79
VCAN-206ENST00000505615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.11□□□□□ -0.79
VCAN-206ENST00000505615 RYDENQ9NUL5 291 aaKnown RBP10.11□□□□□ -0.79
VCAN-206ENST00000505615 KCPQ6ZWJ8 1503 aa10.11□□□□□ -0.79
VCAN-206ENST00000505615 PALLDQ8WX93 1383 aa10.11□□□□□ -0.79
VCAN-206ENST00000505615 HSPA1AP0DMV8 641 aaKnown RBP10.1□□□□□ -0.79
VCAN-206ENST00000505615 HSPA1BP0DMV9 641 aaKnown RBP10.1□□□□□ -0.79
VCAN-206ENST00000505615 ZCRB1Q8TBF4 217 aaKnown RBP10.1□□□□□ -0.79
VCAN-206ENST00000505615 IP6K1Q92551 441 aa10.1□□□□□ -0.79
VCAN-206ENST00000505615 PLEKHG2Q9H7P9 1386 aa10.09□□□□□ -0.79
VCAN-206ENST00000505615 NSD3Q9BZ95 1437 aa10.08□□□□□ -0.8
VCAN-206ENST00000505615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.08□□□□□ -0.8
VCAN-206ENST00000505615 PHF14O94880 888 aa10.08□□□□□ -0.8
VCAN-206ENST00000505615 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
VCAN-206ENST00000505615 LTV1Q96GA3 475 aaPredicted RBP10.08□□□□□ -0.8
VCAN-206ENST00000505615 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
VCAN-206ENST00000505615 EDC4Q6P2E9 1401 aaKnown RBP10.07□□□□□ -0.8
VCAN-206ENST00000505615 PTPREP23469 700 aa10.07□□□□□ -0.8
VCAN-206ENST00000505615 AK7Q96M32 723 aa10.07□□□□□ -0.8
VCAN-206ENST00000505615 BCS1LQ9Y276 419 aa10.07□□□□□ -0.8
VCAN-206ENST00000505615 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
VCAN-206ENST00000505615 SSFA2P28290 1259 aa10.06□□□□□ -0.8
VCAN-206ENST00000505615 C9orf131Q5VYM1 1079 aa10.06□□□□□ -0.8
VCAN-206ENST00000505615 ARHGAP27Q6ZUM4 889 aa10.06□□□□□ -0.8
VCAN-206ENST00000505615 C16orf71Q8IYS4 520 aaPredicted RBP10.06□□□□□ -0.8
VCAN-206ENST00000505615 A0A0G2JLW4 131 aa10.05□□□□□ -0.8
VCAN-206ENST00000505615 MMP10P09238 476 aa10.05□□□□□ -0.8
VCAN-206ENST00000505615 HOXC9P31274 260 aa10.05□□□□□ -0.8
VCAN-206ENST00000505615 PTPN5P54829 565 aa10.05□□□□□ -0.8
VCAN-206ENST00000505615 LINC00116Q8NCU8 138 aa10.05□□□□□ -0.8
VCAN-206ENST00000505615 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
VCAN-206ENST00000505615 CCDC88AQ3V6T2 1871 aa10.04□□□□□ -0.8
VCAN-206ENST00000505615 HMGB2P26583 209 aaKnown RBP10.04□□□□□ -0.8
VCAN-206ENST00000505615 TGFB2P61812 414 aa10.04□□□□□ -0.8
VCAN-206ENST00000505615 SMC1BQ8NDV3 1235 aa10.04□□□□□ -0.8
VCAN-206ENST00000505615 CGNL1Q0VF96 1302 aa10.04□□□□□ -0.8
VCAN-206ENST00000505615 A0A1W2PP64 1363 aa10.03□□□□□ -0.8
VCAN-206ENST00000505615 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
VCAN-206ENST00000505615 RGS20O76081 388 aa10.03□□□□□ -0.8
VCAN-206ENST00000505615 DPEP1P16444 411 aa10.03□□□□□ -0.8
VCAN-206ENST00000505615 PDE4DIPQ5VU43 2346 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms