RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PDE6BP35913 854 aa13.48□□□□□ -0.25
NEDD9-210ENST00000505589 HTRA3P83110 453 aa13.48□□□□□ -0.25
NEDD9-210ENST00000505589 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
NEDD9-210ENST00000505589 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
NEDD9-210ENST00000505589 KIAA1551Q9HCM1 1747 aa13.47□□□□□ -0.25
NEDD9-210ENST00000505589 BRCA1P38398 1863 aaKnown RBP13.47□□□□□ -0.25
NEDD9-210ENST00000505589 EIF4G2P78344 907 aaKnown RBP eCLIP13.47□□□□□ -0.25
NEDD9-210ENST00000505589 PANK3Q9H999 370 aa13.47□□□□□ -0.25
NEDD9-210ENST00000505589 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
NEDD9-210ENST00000505589 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.25
NEDD9-210ENST00000505589 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
NEDD9-210ENST00000505589 NFIXQ14938 502 aa13.46□□□□□ -0.25
NEDD9-210ENST00000505589 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.25
NEDD9-210ENST00000505589 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.25
NEDD9-210ENST00000505589 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
NEDD9-210ENST00000505589 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
NEDD9-210ENST00000505589 TNRC6CQ9HCJ0 1690 aaKnown RBP13.45□□□□□ -0.26
NEDD9-210ENST00000505589 CAPN15O75808 1086 aa13.45□□□□□ -0.26
NEDD9-210ENST00000505589 HSPA1AP0DMV8 641 aaKnown RBP13.45□□□□□ -0.26
NEDD9-210ENST00000505589 HSPA1BP0DMV9 641 aaKnown RBP13.45□□□□□ -0.26
NEDD9-210ENST00000505589 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
NEDD9-210ENST00000505589 TTC5Q8N0Z6 440 aa13.45□□□□□ -0.26
NEDD9-210ENST00000505589 MYH14Q7Z406 1995 aaKnown RBP13.45□□□□□ -0.26
NEDD9-210ENST00000505589 RNMTO43148 476 aaKnown RBP13.44□□□□□ -0.26
NEDD9-210ENST00000505589 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
NEDD9-210ENST00000505589 BRIP1Q9BX63 1249 aa13.44□□□□□ -0.26
NEDD9-210ENST00000505589 PCNTO95613 3336 aa13.43□□□□□ -0.26
NEDD9-210ENST00000505589 IL13P35225 146 aa13.43□□□□□ -0.26
NEDD9-210ENST00000505589 RASSF7Q02833 373 aa13.43□□□□□ -0.26
NEDD9-210ENST00000505589 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
NEDD9-210ENST00000505589 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
NEDD9-210ENST00000505589 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
NEDD9-210ENST00000505589 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.26
NEDD9-210ENST00000505589 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
NEDD9-210ENST00000505589 COL15A1P39059 1388 aa13.43□□□□□ -0.26
NEDD9-210ENST00000505589 SBF1O95248 1867 aa13.42□□□□□ -0.26
NEDD9-210ENST00000505589 IQCA1LA6NCM1 817 aa13.42□□□□□ -0.26
NEDD9-210ENST00000505589 NPHP1O15259 732 aa13.42□□□□□ -0.26
NEDD9-210ENST00000505589 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
NEDD9-210ENST00000505589 LGR6Q9HBX8 967 aa13.42□□□□□ -0.26
NEDD9-210ENST00000505589 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
NEDD9-210ENST00000505589 ZBTB1Q9Y2K1 713 aa13.41□□□□□ -0.26
NEDD9-210ENST00000505589 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
NEDD9-210ENST00000505589 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
NEDD9-210ENST00000505589 LTBP3Q9NS15 1303 aa13.39□□□□□ -0.27
NEDD9-210ENST00000505589 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
NEDD9-210ENST00000505589 EIF5P55010 431 aaKnown RBP13.39□□□□□ -0.27
NEDD9-210ENST00000505589 ST5P78524 1137 aa13.39□□□□□ -0.27
NEDD9-210ENST00000505589 TEFQ10587 303 aa13.39□□□□□ -0.27
NEDD9-210ENST00000505589 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
NEDD9-210ENST00000505589 AIDAQ96BJ3 306 aa13.39□□□□□ -0.27
NEDD9-210ENST00000505589 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
NEDD9-210ENST00000505589 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
NEDD9-210ENST00000505589 NFKBIEO00221 500 aa13.38□□□□□ -0.27
NEDD9-210ENST00000505589 C21orf2O43822 256 aa13.38□□□□□ -0.27
NEDD9-210ENST00000505589 BCL2L12Q9HB09 334 aa13.38□□□□□ -0.27
NEDD9-210ENST00000505589 CARMIL3Q8ND23 1372 aa13.37□□□□□ -0.27
NEDD9-210ENST00000505589 POTECB2RU33 542 aa13.37□□□□□ -0.27
NEDD9-210ENST00000505589 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
NEDD9-210ENST00000505589 STYK1Q6J9G0 422 aa13.37□□□□□ -0.27
NEDD9-210ENST00000505589 MASTLQ96GX5 879 aa13.37□□□□□ -0.27
NEDD9-210ENST00000505589 MTHFSDQ2M296 383 aaKnown RBP13.36□□□□□ -0.27
NEDD9-210ENST00000505589 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
NEDD9-210ENST00000505589 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
NEDD9-210ENST00000505589 LDHDQ86WU2 507 aa13.36□□□□□ -0.27
NEDD9-210ENST00000505589 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
NEDD9-210ENST00000505589 GAS2L2Q8NHY3 880 aa13.36□□□□□ -0.27
NEDD9-210ENST00000505589 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
NEDD9-210ENST00000505589 GNAT3A8MTJ3 354 aa13.35□□□□□ -0.27
NEDD9-210ENST00000505589 HMOX1P09601 288 aa13.35□□□□□ -0.27
NEDD9-210ENST00000505589 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
NEDD9-210ENST00000505589 CTCFP49711 727 aaPredicted RBP13.35□□□□□ -0.27
NEDD9-210ENST00000505589 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
NEDD9-210ENST00000505589 PRR5LQ6MZQ0 368 aa13.35□□□□□ -0.27
NEDD9-210ENST00000505589 PNMA8AQ86V59 439 aaPredicted RBP13.35□□□□□ -0.27
NEDD9-210ENST00000505589 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
NEDD9-210ENST00000505589 ZNF652Q9Y2D9 606 aa13.35□□□□□ -0.27
NEDD9-210ENST00000505589 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
NEDD9-210ENST00000505589 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
NEDD9-210ENST00000505589 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
NEDD9-210ENST00000505589 TBC1D2BQ9UPU7 963 aa13.34□□□□□ -0.27
NEDD9-210ENST00000505589 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
NEDD9-210ENST00000505589 TJP1Q07157 1748 aa13.33□□□□□ -0.27
NEDD9-210ENST00000505589 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.27
NEDD9-210ENST00000505589 DDNO94850 711 aaPredicted RBP13.33□□□□□ -0.28
NEDD9-210ENST00000505589 SRGNP10124 158 aa13.33□□□□□ -0.28
NEDD9-210ENST00000505589 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.28
NEDD9-210ENST00000505589 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.28
NEDD9-210ENST00000505589 L3MBTL3Q96JM7 780 aaPredicted RBP13.33□□□□□ -0.28
NEDD9-210ENST00000505589 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.28
NEDD9-210ENST00000505589 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
NEDD9-210ENST00000505589 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
NEDD9-210ENST00000505589 RGL2O15211 777 aa13.32□□□□□ -0.28
NEDD9-210ENST00000505589 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
NEDD9-210ENST00000505589 CCDC93Q567U6 631 aa13.32□□□□□ -0.28
NEDD9-210ENST00000505589 ZNF496Q96IT1 587 aaPredicted RBP13.32□□□□□ -0.28
NEDD9-210ENST00000505589 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
NEDD9-210ENST00000505589 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
NEDD9-210ENST00000505589 MRC1P22897 1456 aa13.31□□□□□ -0.28
NEDD9-210ENST00000505589 NPR1P16066 1061 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms