RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 SOS1Q07889 1333 aaPredicted RBP23.03■■□□□ 1.28
DDR1-257ENST00000505534 JMYQ8N9B5 988 aa23.01■■□□□ 1.27
DDR1-257ENST00000505534 KNSTRNQ9Y448 316 aa23.01■■□□□ 1.27
DDR1-257ENST00000505534 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
DDR1-257ENST00000505534 CYP19A1P11511 503 aaPredicted RBP23■■□□□ 1.27
DDR1-257ENST00000505534 HTRA3P83110 453 aa23■■□□□ 1.27
DDR1-257ENST00000505534 LGR6Q9HBX8 967 aa23■■□□□ 1.27
DDR1-257ENST00000505534 NARFQ9UHQ1 456 aa23■■□□□ 1.27
DDR1-257ENST00000505534 ZC3H4Q9UPT8 1303 aaKnown RBP23■■□□□ 1.27
DDR1-257ENST00000505534 NRXN2Q9P2S2 1712 aa22.99■■□□□ 1.27
DDR1-257ENST00000505534 DLEC1Q9Y238 1755 aa22.99■■□□□ 1.27
DDR1-257ENST00000505534 NFIXQ14938 502 aa22.98■■□□□ 1.27
DDR1-257ENST00000505534 SMC1BQ8NDV3 1235 aa22.98■■□□□ 1.27
DDR1-257ENST00000505534 MRC1P22897 1456 aa22.98■■□□□ 1.27
DDR1-257ENST00000505534 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
DDR1-257ENST00000505534 SLC39A6Q13433 755 aa22.97■■□□□ 1.27
DDR1-257ENST00000505534 LMNB1P20700 586 aa22.96■■□□□ 1.27
DDR1-257ENST00000505534 COL15A1P39059 1388 aa22.96■■□□□ 1.27
DDR1-257ENST00000505534 SERPINB2P05120 415 aa22.95■■□□□ 1.26
DDR1-257ENST00000505534 RASSF7Q02833 373 aa22.95■■□□□ 1.26
DDR1-257ENST00000505534 VSIG10Q8N0Z9 540 aa22.95■■□□□ 1.26
DDR1-257ENST00000505534 ZBTB1Q9Y2K1 713 aa22.95■■□□□ 1.26
DDR1-257ENST00000505534 TTLL6Q8N841 843 aa22.94■■□□□ 1.26
DDR1-257ENST00000505534 GLTPD2A6NH11 291 aa22.93■■□□□ 1.26
DDR1-257ENST00000505534 BCL2L12Q9HB09 334 aa22.93■■□□□ 1.26
DDR1-257ENST00000505534 HMOX1P09601 288 aa22.92■■□□□ 1.26
DDR1-257ENST00000505534 VEGFAP15692 232 aaPredicted RBP22.92■■□□□ 1.26
DDR1-257ENST00000505534 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
DDR1-257ENST00000505534 PCNTO95613 3336 aa22.92■■□□□ 1.26
DDR1-257ENST00000505534 COL13A1Q5TAT6 717 aaPredicted RBP22.91■■□□□ 1.26
DDR1-257ENST00000505534 C2CD5Q86YS7 1000 aa22.91■■□□□ 1.26
DDR1-257ENST00000505534 UBR2Q8IWV8 1755 aa22.91■■□□□ 1.26
DDR1-257ENST00000505534 H0YIN7 160 aa22.9■■□□□ 1.26
DDR1-257ENST00000505534 PRELPP51888 382 aa22.9■■□□□ 1.26
DDR1-257ENST00000505534 MTHFSDQ2M296 383 aaKnown RBP22.9■■□□□ 1.26
DDR1-257ENST00000505534 CANXP27824 592 aaKnown RBP22.89■■□□□ 1.25
DDR1-257ENST00000505534 DICER1Q9UPY3 1922 aaKnown RBP22.88■■□□□ 1.25
DDR1-257ENST00000505534 TIAM2Q8IVF5 1701 aa22.88■■□□□ 1.25
DDR1-257ENST00000505534 STARD3NLO95772 234 aa22.88■■□□□ 1.25
DDR1-257ENST00000505534 A0A087WZG4 1122 aa22.87■■□□□ 1.25
DDR1-257ENST00000505534 EIF5P55010 431 aaKnown RBP22.87■■□□□ 1.25
DDR1-257ENST00000505534 NFKBIEO00221 500 aa22.86■■□□□ 1.25
DDR1-257ENST00000505534 TTC5Q8N0Z6 440 aa22.86■■□□□ 1.25
DDR1-257ENST00000505534 PDZRN3Q9UPQ7 1066 aa22.86■■□□□ 1.25
DDR1-257ENST00000505534 ANKRD31Q8N7Z5 1873 aa22.85■■□□□ 1.25
DDR1-257ENST00000505534 DIAPH1O60610 1272 aaKnown RBP22.85■■□□□ 1.25
DDR1-257ENST00000505534 BICDL1Q6ZP65 573 aa22.85■■□□□ 1.25
DDR1-257ENST00000505534 CARMIL3Q8ND23 1372 aa22.85■■□□□ 1.25
DDR1-257ENST00000505534 FER1L6Q2WGJ9 1857 aa22.84■■□□□ 1.25
DDR1-257ENST00000505534 DPY19L2Q6NUT2 758 aa22.84■■□□□ 1.25
DDR1-257ENST00000505534 PDE6BP35913 854 aa22.83■■□□□ 1.25
DDR1-257ENST00000505534 BRIP1Q9BX63 1249 aa22.83■■□□□ 1.25
DDR1-257ENST00000505534 TEX13AQ9BXU3 409 aaPredicted RBP22.83■■□□□ 1.25
DDR1-257ENST00000505534 TBC1D9BQ66K14 1250 aa22.82■■□□□ 1.24
DDR1-257ENST00000505534 ZNF622Q969S3 477 aaKnown RBP eCLIP22.82■■□□□ 1.24
DDR1-257ENST00000505534 POTECB2RU33 542 aa22.81■■□□□ 1.24
DDR1-257ENST00000505534 TNS4Q8IZW8 715 aa22.81■■□□□ 1.24
DDR1-257ENST00000505534 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
DDR1-257ENST00000505534 SCN7AQ01118 1682 aa22.8■■□□□ 1.24
DDR1-257ENST00000505534 HEG1Q9ULI3 1381 aa22.79■■□□□ 1.24
DDR1-257ENST00000505534 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
DDR1-257ENST00000505534 PER1O15534 1290 aaPredicted RBP22.79■■□□□ 1.24
DDR1-257ENST00000505534 TEFQ10587 303 aa22.79■■□□□ 1.24
DDR1-257ENST00000505534 ZNF790Q6PG37 636 aa22.79■■□□□ 1.24
DDR1-257ENST00000505534 C21orf2O43822 256 aa22.78■■□□□ 1.24
DDR1-257ENST00000505534 COL11A2P13942 1736 aaPredicted RBP22.78■■□□□ 1.24
DDR1-257ENST00000505534 IL6STP40189 918 aaPredicted RBP22.78■■□□□ 1.24
DDR1-257ENST00000505534 ERFEQ4G0M1 354 aa22.78■■□□□ 1.24
DDR1-257ENST00000505534 PRR5LQ6MZQ0 368 aa22.78■■□□□ 1.24
DDR1-257ENST00000505534 IL17REQ8NFR9 667 aa22.78■■□□□ 1.24
DDR1-257ENST00000505534 TBC1D2BQ9UPU7 963 aa22.78■■□□□ 1.24
DDR1-257ENST00000505534 KIF7Q2M1P5 1343 aa22.78■■□□□ 1.24
DDR1-257ENST00000505534 GNAT3A8MTJ3 354 aa22.77■■□□□ 1.24
DDR1-257ENST00000505534 HSPA1AP0DMV8 641 aaKnown RBP22.77■■□□□ 1.24
DDR1-257ENST00000505534 HSPA1BP0DMV9 641 aaKnown RBP22.77■■□□□ 1.24
DDR1-257ENST00000505534 GAS2L2Q8NHY3 880 aa22.77■■□□□ 1.24
DDR1-257ENST00000505534 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.24
DDR1-257ENST00000505534 ZNF219Q9P2Y4 722 aaPredicted RBP22.77■■□□□ 1.24
DDR1-257ENST00000505534 LTBP3Q9NS15 1303 aa22.77■■□□□ 1.24
DDR1-257ENST00000505534 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
DDR1-257ENST00000505534 SLX4Q8IY92 1834 aa22.76■■□□□ 1.23
DDR1-257ENST00000505534 NPM2Q86SE8 214 aaKnown RBP22.76■■□□□ 1.23
DDR1-257ENST00000505534 ZNF330Q9Y3S2 320 aaPredicted RBP22.76■■□□□ 1.23
DDR1-257ENST00000505534 CAPN15O75808 1086 aa22.75■■□□□ 1.23
DDR1-257ENST00000505534 CC2D1BQ5T0F9 858 aaKnown RBP22.75■■□□□ 1.23
DDR1-257ENST00000505534 CCDC24Q8N4L8 307 aa22.75■■□□□ 1.23
DDR1-257ENST00000505534 CNKSR1Q969H4 720 aa22.75■■□□□ 1.23
DDR1-257ENST00000505534 FMNL2Q96PY5 1086 aa22.75■■□□□ 1.23
DDR1-257ENST00000505534 SETDB2Q96T68 719 aa22.75■■□□□ 1.23
DDR1-257ENST00000505534 TAOK3Q9H2K8 898 aa22.74■■□□□ 1.23
DDR1-257ENST00000505534 STYK1Q6J9G0 422 aa22.73■■□□□ 1.23
DDR1-257ENST00000505534 CNBD1Q8NA66 436 aa22.73■■□□□ 1.23
DDR1-257ENST00000505534 ARFGEF2Q9Y6D5 1785 aa22.73■■□□□ 1.23
DDR1-257ENST00000505534 U2SURPO15042 1029 aaKnown RBP22.72■■□□□ 1.23
DDR1-257ENST00000505534 NPHP1O15259 732 aa22.72■■□□□ 1.23
DDR1-257ENST00000505534 CAMTA2O94983 1202 aa22.72■■□□□ 1.23
DDR1-257ENST00000505534 A1BGP04217 495 aa22.72■■□□□ 1.23
DDR1-257ENST00000505534 ST5P78524 1137 aa22.72■■□□□ 1.23
DDR1-257ENST00000505534 SOGA3Q5TF21 947 aa22.72■■□□□ 1.23
DDR1-257ENST00000505534 CHADLQ6NUI6 762 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms