RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 KLRG1Q96E93 195 aa21.01■□□□□ 0.95
PDCD6-203ENST00000505526 TJP1Q07157 1748 aa21■□□□□ 0.95
PDCD6-203ENST00000505526 INTS5Q6P9B9 1019 aaKnown RBP21■□□□□ 0.95
PDCD6-203ENST00000505526 RRAGCQ9HB90 399 aa21■□□□□ 0.95
PDCD6-203ENST00000505526 POLRMTO00411 1230 aaKnown RBP20.99■□□□□ 0.95
PDCD6-203ENST00000505526 TM4SF1P30408 202 aa20.99■□□□□ 0.95
PDCD6-203ENST00000505526 SULT6B1Q6IMI4 303 aa20.98■□□□□ 0.95
PDCD6-203ENST00000505526 JMYQ8N9B5 988 aa20.98■□□□□ 0.95
PDCD6-203ENST00000505526 ZPR1O75312 459 aa20.96■□□□□ 0.95
PDCD6-203ENST00000505526 USPL1Q5W0Q7 1092 aa20.96■□□□□ 0.95
PDCD6-203ENST00000505526 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
PDCD6-203ENST00000505526 TNRC6CQ9HCJ0 1690 aaKnown RBP20.95■□□□□ 0.94
PDCD6-203ENST00000505526 CCER2I3L3R5 266 aa20.94■□□□□ 0.94
PDCD6-203ENST00000505526 CCDC184Q52MB2 194 aa20.94■□□□□ 0.94
PDCD6-203ENST00000505526 DNAJC10Q8IXB1 793 aa20.94■□□□□ 0.94
PDCD6-203ENST00000505526 SBF1O95248 1867 aa20.94■□□□□ 0.94
PDCD6-203ENST00000505526 COL13A1Q5TAT6 717 aaPredicted RBP20.94■□□□□ 0.94
PDCD6-203ENST00000505526 SMC1BQ8NDV3 1235 aa20.94■□□□□ 0.94
PDCD6-203ENST00000505526 SCN11AQ9UI33 1791 aa20.93■□□□□ 0.94
PDCD6-203ENST00000505526 SOS1Q07889 1333 aaPredicted RBP20.93■□□□□ 0.94
PDCD6-203ENST00000505526 RASSF7Q02833 373 aa20.93■□□□□ 0.94
PDCD6-203ENST00000505526 IL13P35225 146 aa20.92■□□□□ 0.94
PDCD6-203ENST00000505526 AKAP4Q5JQC9 854 aa20.92■□□□□ 0.94
PDCD6-203ENST00000505526 SLC52A2Q9HAB3 445 aa20.92■□□□□ 0.94
PDCD6-203ENST00000505526 MRS2Q9HD23 443 aa20.92■□□□□ 0.94
PDCD6-203ENST00000505526 ZC3H4Q9UPT8 1303 aaKnown RBP20.91■□□□□ 0.94
PDCD6-203ENST00000505526 CYP19A1P11511 503 aaPredicted RBP20.91■□□□□ 0.94
PDCD6-203ENST00000505526 NFIXQ14938 502 aa20.91■□□□□ 0.94
PDCD6-203ENST00000505526 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
PDCD6-203ENST00000505526 LGR6Q9HBX8 967 aa20.9■□□□□ 0.94
PDCD6-203ENST00000505526 NARFQ9UHQ1 456 aa20.9■□□□□ 0.94
PDCD6-203ENST00000505526 LMNB1P20700 586 aa20.88■□□□□ 0.93
PDCD6-203ENST00000505526 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
PDCD6-203ENST00000505526 COL15A1P39059 1388 aa20.88■□□□□ 0.93
PDCD6-203ENST00000505526 AFDNP55196 1824 aaKnown RBP20.88■□□□□ 0.93
PDCD6-203ENST00000505526 COL3A1P02461 1466 aaPredicted RBP20.88■□□□□ 0.93
PDCD6-203ENST00000505526 GLTPD2A6NH11 291 aa20.88■□□□□ 0.93
PDCD6-203ENST00000505526 VEGFAP15692 232 aaPredicted RBP20.88■□□□□ 0.93
PDCD6-203ENST00000505526 SERPINB2P05120 415 aa20.87■□□□□ 0.93
PDCD6-203ENST00000505526 PRELPP51888 382 aa20.87■□□□□ 0.93
PDCD6-203ENST00000505526 TTLL6Q8N841 843 aa20.87■□□□□ 0.93
PDCD6-203ENST00000505526 BCL2L12Q9HB09 334 aa20.87■□□□□ 0.93
PDCD6-203ENST00000505526 NRXN2Q9P2S2 1712 aa20.87■□□□□ 0.93
PDCD6-203ENST00000505526 ZBTB1Q9Y2K1 713 aa20.87■□□□□ 0.93
PDCD6-203ENST00000505526 RNMTO43148 476 aaKnown RBP20.86■□□□□ 0.93
PDCD6-203ENST00000505526 MRC1P22897 1456 aa20.85■□□□□ 0.93
PDCD6-203ENST00000505526 C2CD5Q86YS7 1000 aa20.85■□□□□ 0.93
PDCD6-203ENST00000505526 DLEC1Q9Y238 1755 aa20.84■□□□□ 0.93
PDCD6-203ENST00000505526 DIAPH1O60610 1272 aaKnown RBP20.84■□□□□ 0.93
PDCD6-203ENST00000505526 CAPN15O75808 1086 aa20.84■□□□□ 0.93
PDCD6-203ENST00000505526 TNS4Q8IZW8 715 aa20.84■□□□□ 0.93
PDCD6-203ENST00000505526 H0YIN7 160 aa20.83■□□□□ 0.93
PDCD6-203ENST00000505526 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
PDCD6-203ENST00000505526 HMOX1P09601 288 aa20.82■□□□□ 0.92
PDCD6-203ENST00000505526 CARMIL3Q8ND23 1372 aa20.82■□□□□ 0.92
PDCD6-203ENST00000505526 NFKBIEO00221 500 aa20.81■□□□□ 0.92
PDCD6-203ENST00000505526 CANXP27824 592 aaKnown RBP20.81■□□□□ 0.92
PDCD6-203ENST00000505526 TIAM2Q8IVF5 1701 aa20.81■□□□□ 0.92
PDCD6-203ENST00000505526 MTHFSDQ2M296 383 aaKnown RBP20.81■□□□□ 0.92
PDCD6-203ENST00000505526 BICDL1Q6ZP65 573 aa20.81■□□□□ 0.92
PDCD6-203ENST00000505526 PNISRQ8TF01 805 aaKnown RBP20.81■□□□□ 0.92
PDCD6-203ENST00000505526 NUDCQ9Y266 331 aa20.8■□□□□ 0.92
PDCD6-203ENST00000505526 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
PDCD6-203ENST00000505526 WDR43Q15061 677 aaKnown RBP eCLIP20.79■□□□□ 0.92
PDCD6-203ENST00000505526 VIRMAQ69YN4 1812 aaKnown RBP20.79■□□□□ 0.92
PDCD6-203ENST00000505526 POTECB2RU33 542 aa20.78■□□□□ 0.92
PDCD6-203ENST00000505526 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
PDCD6-203ENST00000505526 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
PDCD6-203ENST00000505526 EIF5P55010 431 aaKnown RBP20.78■□□□□ 0.92
PDCD6-203ENST00000505526 DPY19L2Q6NUT2 758 aa20.78■□□□□ 0.92
PDCD6-203ENST00000505526 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
PDCD6-203ENST00000505526 CCDC88AQ3V6T2 1871 aa20.78■□□□□ 0.92
PDCD6-203ENST00000505526 A0A087WZG4 1122 aa20.77■□□□□ 0.92
PDCD6-203ENST00000505526 STARD3NLO95772 234 aa20.77■□□□□ 0.92
PDCD6-203ENST00000505526 ZNF622Q969S3 477 aaKnown RBP eCLIP20.77■□□□□ 0.921e-6■■□□□ 14.2
PDCD6-203ENST00000505526 PCNTO95613 3336 aa20.77■□□□□ 0.92
PDCD6-203ENST00000505526 UBR2Q8IWV8 1755 aa20.76■□□□□ 0.91
PDCD6-203ENST00000505526 TBC1D9BQ66K14 1250 aa20.76■□□□□ 0.91
PDCD6-203ENST00000505526 TTC5Q8N0Z6 440 aa20.76■□□□□ 0.91
PDCD6-203ENST00000505526 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
PDCD6-203ENST00000505526 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.91
PDCD6-203ENST00000505526 BRIP1Q9BX63 1249 aa20.75■□□□□ 0.91
PDCD6-203ENST00000505526 ZNF219Q9P2Y4 722 aaPredicted RBP20.75■□□□□ 0.91
PDCD6-203ENST00000505526 C21orf2O43822 256 aa20.75■□□□□ 0.91
PDCD6-203ENST00000505526 PDE6BP35913 854 aa20.75■□□□□ 0.91
PDCD6-203ENST00000505526 ADAMTS8Q9UP79 889 aa20.75■□□□□ 0.91
PDCD6-203ENST00000505526 PDZRN3Q9UPQ7 1066 aa20.75■□□□□ 0.91
PDCD6-203ENST00000505526 ERFEQ4G0M1 354 aa20.74■□□□□ 0.91
PDCD6-203ENST00000505526 ANKRD31Q8N7Z5 1873 aa20.73■□□□□ 0.91
PDCD6-203ENST00000505526 PRR5LQ6MZQ0 368 aa20.73■□□□□ 0.91
PDCD6-203ENST00000505526 CCDC24Q8N4L8 307 aa20.73■□□□□ 0.91
PDCD6-203ENST00000505526 ZNF496Q96IT1 587 aaPredicted RBP20.72■□□□□ 0.91
PDCD6-203ENST00000505526 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
PDCD6-203ENST00000505526 ZNF330Q9Y3S2 320 aaPredicted RBP20.72■□□□□ 0.91
PDCD6-203ENST00000505526 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
PDCD6-203ENST00000505526 HEG1Q9ULI3 1381 aa20.7■□□□□ 0.9
PDCD6-203ENST00000505526 ZNF790Q6PG37 636 aa20.7■□□□□ 0.9
PDCD6-203ENST00000505526 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
PDCD6-203ENST00000505526 SCN7AQ01118 1682 aa20.7■□□□□ 0.9
PDCD6-203ENST00000505526 FER1L6Q2WGJ9 1857 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 686.7 ms