RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 SOS1Q07889 1333 aaPredicted RBP14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 A0A087WZG4 1122 aa14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 POLRMTO00411 1230 aaKnown RBP14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 APLP1P51693 650 aa14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 DDR1Q08345 913 aa14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 TEFQ10587 303 aa14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 C9orf131Q5VYM1 1079 aa14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 GAS2L2Q8NHY3 880 aa14.96□□□□□ -0.01
UBE2D3-219ENST00000505207 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
UBE2D3-219ENST00000505207 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
UBE2D3-219ENST00000505207 NPM2Q86SE8 214 aaKnown RBP14.95□□□□□ -0.02
UBE2D3-219ENST00000505207 SCN11AQ9UI33 1791 aa14.95□□□□□ -0.02
UBE2D3-219ENST00000505207 NPC1L1Q9UHC9 1359 aa14.95□□□□□ -0.02
UBE2D3-219ENST00000505207 N4BP2Q86UW6 1770 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-219ENST00000505207 GNAT3A8MTJ3 354 aa14.94□□□□□ -0.02
UBE2D3-219ENST00000505207 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
UBE2D3-219ENST00000505207 CANXP27824 592 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-219ENST00000505207 CHRNA5P30532 468 aa14.93□□□□□ -0.02
UBE2D3-219ENST00000505207 NFIXQ14938 502 aa14.93□□□□□ -0.02
UBE2D3-219ENST00000505207 ZBTB1Q9Y2K1 713 aa14.93□□□□□ -0.02
UBE2D3-219ENST00000505207 COL15A1P39059 1388 aa14.93□□□□□ -0.02
UBE2D3-219ENST00000505207 SERPINB2P05120 415 aa14.92□□□□□ -0.02
UBE2D3-219ENST00000505207 RNF181Q9P0P0 153 aa14.92□□□□□ -0.02
UBE2D3-219ENST00000505207 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
UBE2D3-219ENST00000505207 MRC1P22897 1456 aa14.92□□□□□ -0.02
UBE2D3-219ENST00000505207 CEP350Q5VT06 3117 aa14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 H0YIN7 160 aa14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 CNGB1Q14028 1251 aaPredicted RBP14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 RBM46Q8TBY0 533 aaKnown RBP14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 NMRK2Q9NPI5 230 aa14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 NUDCQ9Y266 331 aa14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 TJP1Q07157 1748 aa14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 KIAA1551Q9HCM1 1747 aa14.91□□□□□ -0.02
UBE2D3-219ENST00000505207 IFFO2Q5TF58 517 aa14.9□□□□□ -0.02
UBE2D3-219ENST00000505207 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
UBE2D3-219ENST00000505207 TTLL6Q8N841 843 aa14.9□□□□□ -0.02
UBE2D3-219ENST00000505207 FMNL2Q96PY5 1086 aa14.9□□□□□ -0.02
UBE2D3-219ENST00000505207 ZC3H4Q9UPT8 1303 aaKnown RBP14.9□□□□□ -0.02
UBE2D3-219ENST00000505207 EIF5P55010 431 aaKnown RBP14.89□□□□□ -0.03
UBE2D3-219ENST00000505207 FSTL1Q12841 308 aa14.89□□□□□ -0.03
UBE2D3-219ENST00000505207 C2CD5Q86YS7 1000 aa14.88□□□□□ -0.03
UBE2D3-219ENST00000505207 IL17REQ8NFR9 667 aa14.88□□□□□ -0.03
UBE2D3-219ENST00000505207 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-219ENST00000505207 ARFGEF1Q9Y6D6 1849 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 HEG1Q9ULI3 1381 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 NPHP1O15259 732 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 LMNB1P20700 586 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 PDE6BP35913 854 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 IL6STP40189 918 aaPredicted RBP14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 BICDL1Q6ZP65 573 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 RTF1Q92541 710 aaKnown RBP14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 BCL2L12Q9HB09 334 aa14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 ZNF330Q9Y3S2 320 aaPredicted RBP14.87□□□□□ -0.03
UBE2D3-219ENST00000505207 BRCA1P38398 1863 aaKnown RBP14.86□□□□□ -0.03
UBE2D3-219ENST00000505207 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
UBE2D3-219ENST00000505207 BRIP1Q9BX63 1249 aa14.86□□□□□ -0.03
UBE2D3-219ENST00000505207 RRAGCQ9HB90 399 aa14.86□□□□□ -0.03
UBE2D3-219ENST00000505207 SETDB2Q96T68 719 aa14.85□□□□□ -0.03
UBE2D3-219ENST00000505207 ADAMTS7Q9UKP4 1686 aa14.84□□□□□ -0.03
UBE2D3-219ENST00000505207 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
UBE2D3-219ENST00000505207 ZNF622Q969S3 477 aaKnown RBP eCLIP14.84□□□□□ -0.03
UBE2D3-219ENST00000505207 TBC1D2BQ9UPU7 963 aa14.84□□□□□ -0.03
UBE2D3-219ENST00000505207 NEFMP07197 916 aa14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 U2AF1L5P0DN76 240 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 VEGFAP15692 232 aaPredicted RBP14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 U2AF1Q01081 240 aaKnown RBP eCLIP14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 TBC1D9BQ66K14 1250 aa14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 DPY19L2Q6NUT2 758 aa14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 SMC1BQ8NDV3 1235 aa14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 CARMIL3Q8ND23 1372 aa14.83□□□□□ -0.04
UBE2D3-219ENST00000505207 COL3A1P02461 1466 aaPredicted RBP14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 GLTPD2A6NH11 291 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 A1BGP04217 495 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 ST5P78524 1137 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 RASSF7Q02833 373 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 DNAJC5GQ8N7S2 189 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 RSPH6AQ9H0K4 717 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 ZNF652Q9Y2D9 606 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 CEMIPQ8WUJ3 1361 aa14.82□□□□□ -0.04
UBE2D3-219ENST00000505207 HTATSF1O43719 755 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-219ENST00000505207 SNRPA1P09661 255 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-219ENST00000505207 SOGA3Q5TF21 947 aa14.81□□□□□ -0.04
UBE2D3-219ENST00000505207 CLEC4GQ6UXB4 293 aa14.81□□□□□ -0.04
UBE2D3-219ENST00000505207 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-219ENST00000505207 CNBD1Q8NA66 436 aa14.81□□□□□ -0.04
UBE2D3-219ENST00000505207 CNKSR1Q969H4 720 aa14.81□□□□□ -0.04
UBE2D3-219ENST00000505207 PRR5LQ6MZQ0 368 aa14.8□□□□□ -0.04
UBE2D3-219ENST00000505207 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
UBE2D3-219ENST00000505207 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-219ENST00000505207 CAMTA2O94983 1202 aa14.79□□□□□ -0.04
UBE2D3-219ENST00000505207 AFDNP55196 1824 aaKnown RBP14.79□□□□□ -0.04
UBE2D3-219ENST00000505207 STYK1Q6J9G0 422 aa14.79□□□□□ -0.04
UBE2D3-219ENST00000505207 NRXN2Q9P2S2 1712 aa14.79□□□□□ -0.04
UBE2D3-219ENST00000505207 RGL2O15211 777 aa14.78□□□□□ -0.04
UBE2D3-219ENST00000505207 C21orf2O43822 256 aa14.78□□□□□ -0.04
UBE2D3-219ENST00000505207 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
UBE2D3-219ENST00000505207 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
UBE2D3-219ENST00000505207 USP16Q9Y5T5 823 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms