RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 SRGAP3O43295 1099 aa19.46■□□□□ 0.71
DDX41-205ENST00000505081 TPRNQ4KMQ1 711 aa19.46■□□□□ 0.71
DDX41-205ENST00000505081 SRCIN1Q9C0H9 1055 aa19.45■□□□□ 0.7
DDX41-205ENST00000505081 CHPF2Q9P2E5 772 aa19.45■□□□□ 0.7
DDX41-205ENST00000505081 MCM2P49736 904 aa19.45■□□□□ 0.7
DDX41-205ENST00000505081 RHPN1Q8TCX5 695 aa19.45■□□□□ 0.7
DDX41-205ENST00000505081 ANAPC15P60006 121 aa19.45■□□□□ 0.7
DDX41-205ENST00000505081 PI4K2BQ8TCG2 481 aa19.45■□□□□ 0.7
DDX41-205ENST00000505081 LRSAM1Q6UWE0 723 aa19.44■□□□□ 0.7
DDX41-205ENST00000505081 GADD45BO75293 160 aaPredicted RBP19.44■□□□□ 0.7
DDX41-205ENST00000505081 NBPF6Q5VWK0 638 aa19.44■□□□□ 0.7
DDX41-205ENST00000505081 NBPF4Q96M43 638 aa19.44■□□□□ 0.7
DDX41-205ENST00000505081 MARF1Q9Y4F3 1742 aaKnown RBP19.43■□□□□ 0.7
DDX41-205ENST00000505081 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
DDX41-205ENST00000505081 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
DDX41-205ENST00000505081 HSPA4P34932 840 aa19.42■□□□□ 0.7
DDX41-205ENST00000505081 POLA2Q14181 598 aa19.42■□□□□ 0.7
DDX41-205ENST00000505081 MSNP26038 577 aaKnown RBP19.42■□□□□ 0.7
DDX41-205ENST00000505081 EIF4A1P60842 406 aaKnown RBP19.42■□□□□ 0.7
DDX41-205ENST00000505081 CPA1P15085 419 aa19.41■□□□□ 0.7
DDX41-205ENST00000505081 RASEFQ8IZ41 740 aa19.41■□□□□ 0.7
DDX41-205ENST00000505081 INTS4Q96HW7 963 aaKnown RBP19.41■□□□□ 0.7
DDX41-205ENST00000505081 SPG7Q9UQ90 795 aa19.41■□□□□ 0.7
DDX41-205ENST00000505081 CWC27Q6UX04 472 aaKnown RBP19.41■□□□□ 0.7
DDX41-205ENST00000505081 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
DDX41-205ENST00000505081 PDLIM2Q96JY6 352 aa19.41■□□□□ 0.7
DDX41-205ENST00000505081 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.41■□□□□ 0.7
DDX41-205ENST00000505081 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
DDX41-205ENST00000505081 SNX14Q9Y5W7 946 aa19.4■□□□□ 0.7
DDX41-205ENST00000505081 ARHGAP23Q9P227 1491 aa19.4■□□□□ 0.7
DDX41-205ENST00000505081 CACNA1FO60840 1977 aa19.4■□□□□ 0.7
DDX41-205ENST00000505081 PXDNLA1KZ92 1463 aa19.39■□□□□ 0.7
DDX41-205ENST00000505081 SGSM2O43147 1006 aa19.39■□□□□ 0.7
DDX41-205ENST00000505081 KIAA1211Q6ZU35 1233 aa19.39■□□□□ 0.7
DDX41-205ENST00000505081 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.7
DDX41-205ENST00000505081 AOX1Q06278 1338 aa19.39■□□□□ 0.69
DDX41-205ENST00000505081 RAB11FIP3O75154 756 aa19.39■□□□□ 0.69
DDX41-205ENST00000505081 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
DDX41-205ENST00000505081 SLIT1O75093 1534 aa19.39■□□□□ 0.69
DDX41-205ENST00000505081 MBD3O95983 291 aa19.38■□□□□ 0.69
DDX41-205ENST00000505081 USP48Q86UV5 1035 aa19.38■□□□□ 0.69
DDX41-205ENST00000505081 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
DDX41-205ENST00000505081 LSG1Q9H089 658 aaKnown RBP19.38■□□□□ 0.69
DDX41-205ENST00000505081 BABAM1Q9NWV8 329 aa19.38■□□□□ 0.69
DDX41-205ENST00000505081 RAD50Q92878 1312 aa19.37■□□□□ 0.69
DDX41-205ENST00000505081 CEMIPQ8WUJ3 1361 aa19.37■□□□□ 0.69
DDX41-205ENST00000505081 THEMISQ8N1K5 641 aaPredicted RBP19.37■□□□□ 0.69
DDX41-205ENST00000505081 AK2P54819 239 aa19.37■□□□□ 0.69
DDX41-205ENST00000505081 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
DDX41-205ENST00000505081 OS9Q13438 667 aaPredicted RBP19.37■□□□□ 0.69
DDX41-205ENST00000505081 TCHHQ07283 1943 aa19.37■□□□□ 0.69
DDX41-205ENST00000505081 RPAP1Q9BWH6 1393 aaPredicted RBP19.37■□□□□ 0.69
DDX41-205ENST00000505081 DDX54Q8TDD1 881 aaKnown RBP19.36■□□□□ 0.69
DDX41-205ENST00000505081 IL17RAQ96F46 866 aa19.36■□□□□ 0.69
DDX41-205ENST00000505081 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
DDX41-205ENST00000505081 N4BP2Q86UW6 1770 aaPredicted RBP19.36■□□□□ 0.69
DDX41-205ENST00000505081 UBE2Q2Q8WVN8 375 aa19.36■□□□□ 0.69
DDX41-205ENST00000505081 PHF8Q9UPP1 1060 aa19.36■□□□□ 0.69
DDX41-205ENST00000505081 PRAMEF22A3QJZ6 481 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 PROSER3Q2NL68 480 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 IP6K1Q92551 441 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 ADCY9O60503 1353 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 BTBD11A6QL63 1104 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 RUFY3Q7L099 469 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 CNTROBQ8N137 903 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 NOL7Q9UMY1 257 aaKnown RBP19.35■□□□□ 0.69
DDX41-205ENST00000505081 CNPY2Q9Y2B0 182 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 OFD1O75665 1012 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 LARGE1O95461 756 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 ZNF530Q6P9A1 599 aaPredicted RBP19.35■□□□□ 0.69
DDX41-205ENST00000505081 TTC14Q96N46 770 aa19.35■□□□□ 0.69
DDX41-205ENST00000505081 ANKARQ7Z5J8 1434 aa19.34■□□□□ 0.69
DDX41-205ENST00000505081 TEFQ10587 303 aa19.34■□□□□ 0.69
DDX41-205ENST00000505081 MPNDQ8N594 471 aa19.34■□□□□ 0.69
DDX41-205ENST00000505081 WDR33Q9C0J8 1336 aaKnown RBP19.34■□□□□ 0.69
DDX41-205ENST00000505081 LTN1O94822 1766 aa19.33■□□□□ 0.69
DDX41-205ENST00000505081 PTH1RQ03431 593 aa19.33■□□□□ 0.69
DDX41-205ENST00000505081 HSP90AA2PQ14568 343 aaPredicted RBP19.33■□□□□ 0.69
DDX41-205ENST00000505081 TSPY26PQ9H489 355 aa19.33■□□□□ 0.69
DDX41-205ENST00000505081 CWF19L2Q2TBE0 894 aaKnown RBP19.33■□□□□ 0.68
DDX41-205ENST00000505081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
DDX41-205ENST00000505081 CASTP20810 708 aaKnown RBP19.32■□□□□ 0.68
DDX41-205ENST00000505081 ADCK5Q3MIX3 580 aa19.32■□□□□ 0.68
DDX41-205ENST00000505081 MAP3K2Q9Y2U5 619 aa19.32■□□□□ 0.68
DDX41-205ENST00000505081 RGPD2P0DJD1 1756 aa19.31■□□□□ 0.68
DDX41-205ENST00000505081 HS1BP3Q53T59 392 aa19.31■□□□□ 0.68
DDX41-205ENST00000505081 R3HCC1Q9Y3T6 440 aaKnown RBP19.31■□□□□ 0.68
DDX41-205ENST00000505081 SYT1P21579 422 aa19.31■□□□□ 0.68
DDX41-205ENST00000505081 DIAPH3Q9NSV4 1193 aa19.3■□□□□ 0.68
DDX41-205ENST00000505081 C9orf78Q9NZ63 289 aaPredicted RBP19.3■□□□□ 0.68
DDX41-205ENST00000505081 ZKSCAN5Q9Y2L8 839 aa19.3■□□□□ 0.68
DDX41-205ENST00000505081 ESCO1Q5FWF5 840 aa19.3■□□□□ 0.68
DDX41-205ENST00000505081 PRPF40BQ6NWY9 871 aaKnown RBP19.3■□□□□ 0.68
DDX41-205ENST00000505081 LIMCH1Q9UPQ0 1083 aa19.3■□□□□ 0.68
DDX41-205ENST00000505081 PSME1Q06323 249 aa19.29■□□□□ 0.68
DDX41-205ENST00000505081 COL9A3Q14050 684 aaPredicted RBP19.29■□□□□ 0.68
DDX41-205ENST00000505081 CCDC83Q8IWF9 413 aa19.29■□□□□ 0.68
DDX41-205ENST00000505081 ZSCAN22P10073 491 aaPredicted RBP19.29■□□□□ 0.68
DDX41-205ENST00000505081 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
DDX41-205ENST00000505081 FIBPO43427 364 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms