RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 XPCQ01831 940 aaPredicted RBP7.14□□□□□ -1.27
CDH9-203ENST00000505045 AMHR2Q16671 573 aa7.14□□□□□ -1.27
CDH9-203ENST00000505045 PLA2G2CQ5R387 149 aa7.14□□□□□ -1.27
CDH9-203ENST00000505045 LIAT1Q6ZQX7 453 aa7.14□□□□□ -1.27
CDH9-203ENST00000505045 NUTM2AQ8IVF1 878 aaPredicted RBP7.14□□□□□ -1.27
CDH9-203ENST00000505045 SOS2Q07890 1332 aaPredicted RBP7.14□□□□□ -1.27
CDH9-203ENST00000505045 GDF9O60383 454 aa7.13□□□□□ -1.27
CDH9-203ENST00000505045 KDM4AO75164 1064 aa7.13□□□□□ -1.27
CDH9-203ENST00000505045 FMNL1O95466 1100 aaPredicted RBP7.13□□□□□ -1.27
CDH9-203ENST00000505045 SAFB2Q14151 953 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDH9-203ENST00000505045 RNF19BQ6ZMZ0 732 aa7.13□□□□□ -1.27
CDH9-203ENST00000505045 PSMG3-AS1Q96PY0 264 aa7.13□□□□□ -1.27
CDH9-203ENST00000505045 TRPM3Q9HCF6 1732 aaPredicted RBP7.13□□□□□ -1.27
CDH9-203ENST00000505045 USP46P62068 366 aa7.13□□□□□ -1.27
CDH9-203ENST00000505045 MSS51Q4VC12 460 aa7.13□□□□□ -1.27
CDH9-203ENST00000505045 KIAA1210Q9ULL0 1709 aa7.13□□□□□ -1.27
CDH9-203ENST00000505045 AFF2P51816 1311 aa7.12□□□□□ -1.27
CDH9-203ENST00000505045 GRIPAP1Q4V328 841 aa7.12□□□□□ -1.27
CDH9-203ENST00000505045 ESCO1Q5FWF5 840 aa7.12□□□□□ -1.27
CDH9-203ENST00000505045 MEX3CQ5U5Q3 659 aaKnown RBP7.12□□□□□ -1.27
CDH9-203ENST00000505045 KRI1Q8N9T8 703 aaKnown RBP7.12□□□□□ -1.27
CDH9-203ENST00000505045 DCAF11Q8TEB1 546 aa7.12□□□□□ -1.27
CDH9-203ENST00000505045 PRAM1Q96QH2 718 aa7.12□□□□□ -1.27
CDH9-203ENST00000505045 CRYBG1Q9Y4K1 1723 aa7.12□□□□□ -1.27
CDH9-203ENST00000505045 TOPAZ1Q8N9V7 1692 aa7.12□□□□□ -1.27
CDH9-203ENST00000505045 ACIN1Q9UKV3 1341 aaKnown RBP7.11□□□□□ -1.27
CDH9-203ENST00000505045 HOXA2O43364 376 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 FOXO3O43524 673 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 ZNF697Q5TEC3 545 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 HLA-CQ95604 372 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 LRRC59Q96AG4 307 aaKnown RBP7.11□□□□□ -1.27
CDH9-203ENST00000505045 ALS2Q96Q42 1657 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 RGS12O14924 1447 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 ADAMTS2O95450 1211 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 HRCP23327 699 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 C8orf37Q96NL8 207 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 HIRIP3Q9BW71 556 aaPredicted RBP7.11□□□□□ -1.27
CDH9-203ENST00000505045 TRAK1Q9UPV9 953 aa7.11□□□□□ -1.27
CDH9-203ENST00000505045 PLCH1Q4KWH8 1693 aa7.1□□□□□ -1.27
CDH9-203ENST00000505045 TULP4Q9NRJ4 1543 aa7.1□□□□□ -1.27
CDH9-203ENST00000505045 ATP7BP35670 1465 aa7.1□□□□□ -1.27
CDH9-203ENST00000505045 ITSN1Q15811 1721 aa7.1□□□□□ -1.27
CDH9-203ENST00000505045 NPHP3Q7Z494 1330 aa7.1□□□□□ -1.27
CDH9-203ENST00000505045 PRR36Q9H6K5 1346 aa7.1□□□□□ -1.27
CDH9-203ENST00000505045 SSTR3P32745 418 aaPredicted RBP7.1□□□□□ -1.27
CDH9-203ENST00000505045 PRDM9Q9NQV7 894 aa7.1□□□□□ -1.27
CDH9-203ENST00000505045 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.1□□□□□ -1.27
CDH9-203ENST00000505045 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
CDH9-203ENST00000505045 TRPM1Q7Z4N2 1603 aa7.09□□□□□ -1.27
CDH9-203ENST00000505045 TRIM66O15016 1216 aa7.09□□□□□ -1.27
CDH9-203ENST00000505045 Q3C1V9 767 aa7.09□□□□□ -1.27
CDH9-203ENST00000505045 TNS3Q68CZ2 1445 aa7.09□□□□□ -1.27
CDH9-203ENST00000505045 AXIN1O15169 862 aa7.08□□□□□ -1.28
CDH9-203ENST00000505045 MMP16P51512 607 aa7.08□□□□□ -1.28
CDH9-203ENST00000505045 ANKARQ7Z5J8 1434 aa7.08□□□□□ -1.28
CDH9-203ENST00000505045 BCL9LQ86UU0 1499 aa7.08□□□□□ -1.28
CDH9-203ENST00000505045 CDK12Q9NYV4 1490 aaPredicted RBP7.08□□□□□ -1.28
CDH9-203ENST00000505045 ZNF772Q68DY9 489 aaPredicted RBP7.08□□□□□ -1.28
CDH9-203ENST00000505045 SIRT1Q96EB6 747 aa7.08□□□□□ -1.28
CDH9-203ENST00000505045 GLI3P10071 1580 aa7.08□□□□□ -1.28
CDH9-203ENST00000505045 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
CDH9-203ENST00000505045 SPATA31A3Q5VYP0 1347 aa7.07□□□□□ -1.28
CDH9-203ENST00000505045 PHRF1Q9P1Y6 1649 aaKnown RBP7.07□□□□□ -1.28
CDH9-203ENST00000505045 GMPRP36959 345 aa7.07□□□□□ -1.28
CDH9-203ENST00000505045 RPIAP49247 311 aa7.07□□□□□ -1.28
CDH9-203ENST00000505045 GUCA2AQ02747 115 aa7.07□□□□□ -1.28
CDH9-203ENST00000505045 KCNMA1Q12791 1236 aa7.07□□□□□ -1.28
CDH9-203ENST00000505045 NBPF1Q3BBV0 1214 aa7.07□□□□□ -1.28
CDH9-203ENST00000505045 GIGYF2Q6Y7W6 1299 aaKnown RBP7.07□□□□□ -1.28
CDH9-203ENST00000505045 FCF1Q9Y324 198 aaKnown RBP7.07□□□□□ -1.28
CDH9-203ENST00000505045 ATRNO75882 1429 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 PARP9Q8IXQ6 854 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 PMFBP1Q8TBY8 1022 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 AK7Q96M32 723 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 SIN3AQ96ST3 1273 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 POGKQ9P215 609 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 BRWD3Q6RI45 1802 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 NWD2Q9ULI1 1742 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 DXOO77932 396 aaKnown RBP7.06□□□□□ -1.28
CDH9-203ENST00000505045 CABLES1Q8TDN4 633 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 SPIRE2Q8WWL2 714 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 USB1Q9BQ65 265 aaKnown RBP7.06□□□□□ -1.28
CDH9-203ENST00000505045 SLIT2O94813 1529 aa7.06□□□□□ -1.28
CDH9-203ENST00000505045 GSK3AP49840 483 aa7.05□□□□□ -1.28
CDH9-203ENST00000505045 KRT28Q7Z3Y7 464 aa7.05□□□□□ -1.28
CDH9-203ENST00000505045 NGLY1Q96IV0 654 aa7.05□□□□□ -1.28
CDH9-203ENST00000505045 PCDHGC3Q9UN70 934 aa7.05□□□□□ -1.28
CDH9-203ENST00000505045 WASLO00401 505 aaPredicted RBP7.04□□□□□ -1.28
CDH9-203ENST00000505045 AVPP01185 164 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 SNRPBP14678 240 aaKnown RBP7.04□□□□□ -1.28
CDH9-203ENST00000505045 RXRBP28702 533 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 TTLL12Q14166 644 aaPredicted RBP7.04□□□□□ -1.28
CDH9-203ENST00000505045 NUTM1Q86Y26 1132 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 FNBP4Q8N3X1 1017 aaPredicted RBP7.04□□□□□ -1.28
CDH9-203ENST00000505045 PKD2L1Q9P0L9 805 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 USP21Q9UK80 565 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 SBNO1A3KN83 1393 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 NRKQ7Z2Y5 1582 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 SLC16A10Q8TF71 515 aa7.04□□□□□ -1.28
CDH9-203ENST00000505045 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms