RNA–Protein interactions for RNA: ENST00000504937.5

TP53-209, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-209ENST00000504937 OSBPL3Q9H4L5 887 aa13.36□□□□□ -0.27
TP53-209ENST00000504937 IL1RAPL2Q9NP60 686 aa13.36□□□□□ -0.27
TP53-209ENST00000504937 CIZ1Q9ULV3 898 aaPredicted RBP13.36□□□□□ -0.27
TP53-209ENST00000504937 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
TP53-209ENST00000504937 RRAGDQ9NQL2 400 aaPredicted RBP13.36□□□□□ -0.27
TP53-209ENST00000504937 PALD1Q9ULE6 856 aa13.36□□□□□ -0.27
TP53-209ENST00000504937 IBTKQ9P2D0 1353 aaPredicted RBP13.35□□□□□ -0.27
TP53-209ENST00000504937 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
TP53-209ENST00000504937 CEMIPQ8WUJ3 1361 aa13.35□□□□□ -0.27
TP53-209ENST00000504937 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
TP53-209ENST00000504937 MPRIPQ6WCQ1 1025 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 LRRCC1Q9C099 1032 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 CHPF2Q9P2E5 772 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 MX1P20591 662 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
TP53-209ENST00000504937 MED1Q15648 1581 aaPredicted RBP13.34□□□□□ -0.27
TP53-209ENST00000504937 PXDNQ92626 1479 aa13.34□□□□□ -0.27
TP53-209ENST00000504937 ERC2O15083 957 aa13.33□□□□□ -0.28
TP53-209ENST00000504937 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.28
TP53-209ENST00000504937 BRINP3Q76B58 766 aa13.33□□□□□ -0.28
TP53-209ENST00000504937 NUTM1Q86Y26 1132 aa13.33□□□□□ -0.28
TP53-209ENST00000504937 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
TP53-209ENST00000504937 L1TD1Q5T7N2 865 aaKnown RBP13.33□□□□□ -0.28
TP53-209ENST00000504937 RILPL2Q969X0 211 aa13.33□□□□□ -0.28
TP53-209ENST00000504937 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
TP53-209ENST00000504937 GNAI3P08754 354 aa13.32□□□□□ -0.28
TP53-209ENST00000504937 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
TP53-209ENST00000504937 ZDHHC9Q9Y397 364 aa13.32□□□□□ -0.28
TP53-209ENST00000504937 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
TP53-209ENST00000504937 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
TP53-209ENST00000504937 UBTFL1P0CB47 393 aaPredicted RBP13.32□□□□□ -0.28
TP53-209ENST00000504937 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
TP53-209ENST00000504937 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
TP53-209ENST00000504937 SLIT3O75094 1523 aa13.31□□□□□ -0.28
TP53-209ENST00000504937 PI4KAP2A4QPH2 592 aa13.31□□□□□ -0.28
TP53-209ENST00000504937 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
TP53-209ENST00000504937 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
TP53-209ENST00000504937 PI4KAP1Q8N8J0 262 aa13.31□□□□□ -0.28
TP53-209ENST00000504937 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
TP53-209ENST00000504937 ESYT1Q9BSJ8 1104 aa13.31□□□□□ -0.28
TP53-209ENST00000504937 KIF1AQ12756 1690 aa13.31□□□□□ -0.28
TP53-209ENST00000504937 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
TP53-209ENST00000504937 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
TP53-209ENST00000504937 CHMLP26374 656 aa13.3□□□□□ -0.28
TP53-209ENST00000504937 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
TP53-209ENST00000504937 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
TP53-209ENST00000504937 GRPEL1Q9HAV7 217 aa13.3□□□□□ -0.28
TP53-209ENST00000504937 REC8O95072 547 aa13.3□□□□□ -0.28
TP53-209ENST00000504937 SLAIN2Q9P270 581 aa13.3□□□□□ -0.28
TP53-209ENST00000504937 BEND3Q5T5X7 828 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 FOXD4L5Q5VV16 416 aaPredicted RBP13.29□□□□□ -0.28
TP53-209ENST00000504937 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
TP53-209ENST00000504937 SSH3Q8TE77 659 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 FOXD4L4Q8WXT5 416 aaPredicted RBP13.29□□□□□ -0.28
TP53-209ENST00000504937 DCCP43146 1447 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 ADCY9O60503 1353 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 SURF6O75683 361 aaKnown RBP13.29□□□□□ -0.28
TP53-209ENST00000504937 NEK4P51957 841 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
TP53-209ENST00000504937 NPHP3Q7Z494 1330 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.28□□□□□ -0.28
TP53-209ENST00000504937 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 ANO2Q9NQ90 1003 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 POLA2Q14181 598 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
TP53-209ENST00000504937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.28□□□□□ -0.28
TP53-209ENST00000504937 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.28
TP53-209ENST00000504937 SPATA31A3Q5VYP0 1347 aa13.27□□□□□ -0.28
TP53-209ENST00000504937 FGD1P98174 961 aa13.27□□□□□ -0.28
TP53-209ENST00000504937 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.28
TP53-209ENST00000504937 TMX3Q96JJ7 454 aa13.27□□□□□ -0.28
TP53-209ENST00000504937 UPF3BQ9BZI7 483 aaKnown RBP13.27□□□□□ -0.28
TP53-209ENST00000504937 BABAM1Q9NWV8 329 aa13.27□□□□□ -0.28
TP53-209ENST00000504937 ST18O60284 1047 aa13.27□□□□□ -0.29
TP53-209ENST00000504937 MRE11P49959 708 aa13.27□□□□□ -0.29
TP53-209ENST00000504937 RHPN1Q8TCX5 695 aa13.27□□□□□ -0.29
TP53-209ENST00000504937 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
TP53-209ENST00000504937 BCCIPQ9P287 314 aaKnown RBP eCLIP13.27□□□□□ -0.29
TP53-209ENST00000504937 DTNBO60941 627 aa13.26□□□□□ -0.29
TP53-209ENST00000504937 LMBRD1Q9NUN5 540 aa13.26□□□□□ -0.29
TP53-209ENST00000504937 PHRF1Q9P1Y6 1649 aaKnown RBP13.26□□□□□ -0.29
TP53-209ENST00000504937 LMO7Q8WWI1 1683 aa13.25□□□□□ -0.29
TP53-209ENST00000504937 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
TP53-209ENST00000504937 TEFQ10587 303 aa13.25□□□□□ -0.29
TP53-209ENST00000504937 CWF19L2Q2TBE0 894 aaKnown RBP13.25□□□□□ -0.29
TP53-209ENST00000504937 AKAP4Q5JQC9 854 aa13.25□□□□□ -0.29
TP53-209ENST00000504937 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
TP53-209ENST00000504937 DDX49Q9Y6V7 483 aaKnown RBP13.25□□□□□ -0.29
TP53-209ENST00000504937 TNS3Q68CZ2 1445 aa13.25□□□□□ -0.29
TP53-209ENST00000504937 ERBB3P21860 1342 aa13.25□□□□□ -0.29
TP53-209ENST00000504937 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
TP53-209ENST00000504937 PA2G4Q9UQ80 394 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms