RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 STARD3NLO95772 234 aa33.66■■■□□ 2.98
PVT1-201ENST00000504719 DCTN1Q14203 1278 aa33.66■■■□□ 2.98
PVT1-201ENST00000504719 FKBP8Q14318 412 aa33.66■■■□□ 2.98
PVT1-201ENST00000504719 TEX13AQ9BXU3 409 aaPredicted RBP33.66■■■□□ 2.98
PVT1-201ENST00000504719 COL15A1P39059 1388 aa33.65■■■□□ 2.98
PVT1-201ENST00000504719 GRIN3BO60391 1043 aa33.65■■■□□ 2.98
PVT1-201ENST00000504719 PARP3Q9Y6F1 533 aa33.65■■■□□ 2.98
PVT1-201ENST00000504719 GOLGB1Q14789 3259 aaKnown RBP33.64■■■□□ 2.98
PVT1-201ENST00000504719 ZPR1O75312 459 aa33.64■■■□□ 2.98
PVT1-201ENST00000504719 KIAA1551Q9HCM1 1747 aa33.63■■■□□ 2.97
PVT1-201ENST00000504719 USPL1Q5W0Q7 1092 aa33.63■■■□□ 2.97
PVT1-201ENST00000504719 PNNQ9H307 717 aaKnown RBP33.63■■■□□ 2.97
PVT1-201ENST00000504719 C10orf71Q711Q0 1435 aa33.62■■■□□ 2.97
PVT1-201ENST00000504719 MYBBP1AQ9BQG0 1328 aaKnown RBP33.62■■■□□ 2.97
PVT1-201ENST00000504719 CANXP27824 592 aaKnown RBP33.62■■■□□ 2.97
PVT1-201ENST00000504719 NARFQ9UHQ1 456 aa33.62■■■□□ 2.97
PVT1-201ENST00000504719 N4BP2Q86UW6 1770 aaPredicted RBP33.6■■■□□ 2.97
PVT1-201ENST00000504719 EIF5P55010 431 aaKnown RBP33.59■■■□□ 2.97
PVT1-201ENST00000504719 TGFB2P61812 414 aa33.59■■■□□ 2.97
PVT1-201ENST00000504719 PXDNLA1KZ92 1463 aa33.58■■■□□ 2.97
PVT1-201ENST00000504719 TM4SF1P30408 202 aa33.58■■■□□ 2.97
PVT1-201ENST00000504719 DDR1Q08345 913 aa33.58■■■□□ 2.97
PVT1-201ENST00000504719 NFE2L2Q16236 605 aa33.58■■■□□ 2.97
PVT1-201ENST00000504719 TAF7Q15545 349 aaPredicted RBP33.57■■■□□ 2.96
PVT1-201ENST00000504719 MAPK8IP3Q9UPT6 1336 aa33.55■■■□□ 2.96
PVT1-201ENST00000504719 BCL2L12Q9HB09 334 aa33.55■■■□□ 2.96
PVT1-201ENST00000504719 A0A087WZG4 1122 aa33.54■■■□□ 2.96
PVT1-201ENST00000504719 POLRMTO00411 1230 aaKnown RBP33.54■■■□□ 2.96
PVT1-201ENST00000504719 ZNF784Q8NCA9 323 aaPredicted RBP33.54■■■□□ 2.96
PVT1-201ENST00000504719 WWC3Q9ULE0 1092 aa33.54■■■□□ 2.96
PVT1-201ENST00000504719 A1BGP04217 495 aa33.53■■■□□ 2.96
PVT1-201ENST00000504719 IL6STP40189 918 aaPredicted RBP33.53■■■□□ 2.96
PVT1-201ENST00000504719 PRKRIP1Q9H875 184 aaPredicted RBP33.53■■■□□ 2.96
PVT1-201ENST00000504719 USP16Q9Y5T5 823 aa33.53■■■□□ 2.96
PVT1-201ENST00000504719 AFDNP55196 1824 aaKnown RBP33.52■■■□□ 2.96
PVT1-201ENST00000504719 A0A0G2JLW4 131 aa33.51■■■□□ 2.95
PVT1-201ENST00000504719 PRAMEF22A3QJZ6 481 aa33.51■■■□□ 2.95
PVT1-201ENST00000504719 SNRPA1P09661 255 aaKnown RBP33.51■■■□□ 2.95
PVT1-201ENST00000504719 BRCA1P38398 1863 aaKnown RBP33.5■■■□□ 2.95
PVT1-201ENST00000504719 KDM3BQ7LBC6 1761 aa33.5■■■□□ 2.95
PVT1-201ENST00000504719 NFIXQ14938 502 aa33.5■■■□□ 2.95
PVT1-201ENST00000504719 DPEP1P16444 411 aa33.49■■■□□ 2.95
PVT1-201ENST00000504719 MIS18AQ9NYP9 233 aa33.49■■■□□ 2.95
PVT1-201ENST00000504719 NRXN2Q9P2S2 1712 aa33.48■■■□□ 2.95
PVT1-201ENST00000504719 PNISRQ8TF01 805 aaKnown RBP33.48■■■□□ 2.95
PVT1-201ENST00000504719 ZNF330Q9Y3S2 320 aaPredicted RBP33.47■■■□□ 2.95
PVT1-201ENST00000504719 SCN7AQ01118 1682 aa33.47■■■□□ 2.95
PVT1-201ENST00000504719 THUMPD2Q9BTF0 503 aaKnown RBP33.46■■■□□ 2.95
PVT1-201ENST00000504719 TBC1D2BQ9UPU7 963 aa33.46■■■□□ 2.95
PVT1-201ENST00000504719 KCNA3P22001 575 aa33.44■■■□□ 2.94
PVT1-201ENST00000504719 RIPK4P57078 832 aa33.43■■■□□ 2.94
PVT1-201ENST00000504719 NPM2Q86SE8 214 aaKnown RBP33.43■■■□□ 2.94
PVT1-201ENST00000504719 LAMB4A4D0S4 1761 aa33.42■■■□□ 2.94
PVT1-201ENST00000504719 SERPINB2P05120 415 aa33.42■■■□□ 2.94
PVT1-201ENST00000504719 BCS1LQ9Y276 419 aa33.42■■■□□ 2.94
PVT1-201ENST00000504719 TMPOP42166 694 aaKnown RBP33.41■■■□□ 2.94
PVT1-201ENST00000504719 PIP4K2AP48426 406 aaPredicted RBP33.41■■■□□ 2.94
PVT1-201ENST00000504719 BCORQ6W2J9 1755 aa33.41■■■□□ 2.94
PVT1-201ENST00000504719 TBC1D9BQ66K14 1250 aa33.4■■■□□ 2.94
PVT1-201ENST00000504719 CAMTA2O94983 1202 aa33.39■■■□□ 2.94
PVT1-201ENST00000504719 WDR43Q15061 677 aaKnown RBP eCLIP33.39■■■□□ 2.94
PVT1-201ENST00000504719 BICDL1Q6ZP65 573 aa33.39■■■□□ 2.94
PVT1-201ENST00000504719 ARFGEF1Q9Y6D6 1849 aa33.39■■■□□ 2.94
PVT1-201ENST00000504719 EIF4A1P60842 406 aaKnown RBP33.38■■■□□ 2.93
PVT1-201ENST00000504719 DZIP3Q86Y13 1208 aaKnown RBP33.38■■■□□ 2.93
PVT1-201ENST00000504719 CCDC146Q8IYE0 955 aa33.38■■■□□ 2.93
PVT1-201ENST00000504719 NBPF26B4DH59 902 aa33.37■■■□□ 2.93
PVT1-201ENST00000504719 NBPF10Q6P3W6 841 aaKnown RBP33.37■■■□□ 2.93
PVT1-201ENST00000504719 NBPF15Q8N660 670 aa33.37■■■□□ 2.93
PVT1-201ENST00000504719 PIM2Q9P1W9 311 aa33.37■■■□□ 2.93
PVT1-201ENST00000504719 CHRNA5P30532 468 aa33.36■■■□□ 2.93
PVT1-201ENST00000504719 RUNDC1Q96C34 613 aa33.36■■■□□ 2.93
PVT1-201ENST00000504719 ADAMTS8Q9UP79 889 aa33.36■■■□□ 2.93
PVT1-201ENST00000504719 GIGYF1O75420 1035 aaPredicted RBP33.35■■■□□ 2.93
PVT1-201ENST00000504719 LMOD3Q0VAK6 560 aa33.35■■■□□ 2.93
PVT1-201ENST00000504719 RRP7AQ9Y3A4 280 aaKnown RBP33.33■■■□□ 2.93
PVT1-201ENST00000504719 DALRD3Q5D0E6 543 aaKnown RBP33.31■■■□□ 2.92
PVT1-201ENST00000504719 TSPYL4Q9UJ04 414 aa33.31■■■□□ 2.92
PVT1-201ENST00000504719 DLEC1Q9Y238 1755 aa33.31■■■□□ 2.92
PVT1-201ENST00000504719 ADCY9O60503 1353 aa33.31■■■□□ 2.92
PVT1-201ENST00000504719 CARMIL3Q8ND23 1372 aa33.31■■■□□ 2.92
PVT1-201ENST00000504719 ANP32CO43423 234 aa33.3■■■□□ 2.92
PVT1-201ENST00000504719 NEUROD2Q15784 382 aa33.3■■■□□ 2.92
PVT1-201ENST00000504719 BABAM1Q9NWV8 329 aa33.3■■■□□ 2.92
PVT1-201ENST00000504719 ANKRD31Q8N7Z5 1873 aa33.29■■■□□ 2.92
PVT1-201ENST00000504719 CLEC4GQ6UXB4 293 aa33.29■■■□□ 2.92
PVT1-201ENST00000504719 SETDB2Q96T68 719 aa33.29■■■□□ 2.92
PVT1-201ENST00000504719 ARHGAP27Q6ZUM4 889 aa33.28■■■□□ 2.92
PVT1-201ENST00000504719 ATP10DQ9P241 1426 aa33.28■■■□□ 2.92
PVT1-201ENST00000504719 PRR5LQ6MZQ0 368 aa33.26■■■□□ 2.91
PVT1-201ENST00000504719 TRIM35Q9UPQ4 493 aa33.26■■■□□ 2.91
PVT1-201ENST00000504719 RGL2O15211 777 aa33.25■■■□□ 2.91
PVT1-201ENST00000504719 ZNF652Q9Y2D9 606 aa33.25■■■□□ 2.91
PVT1-201ENST00000504719 C2CD5Q86YS7 1000 aa33.24■■■□□ 2.91
PVT1-201ENST00000504719 BRIP1Q9BX63 1249 aa33.23■■■□□ 2.91
PVT1-201ENST00000504719 H0YIN7 160 aa33.22■■■□□ 2.91
PVT1-201ENST00000504719 CCDC24Q8N4L8 307 aa33.21■■■□□ 2.91
PVT1-201ENST00000504719 CNBD1Q8NA66 436 aa33.21■■■□□ 2.91
PVT1-201ENST00000504719 PDE6BP35913 854 aa33.2■■■□□ 2.91
PVT1-201ENST00000504719 PDZRN3Q9UPQ7 1066 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms