RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 FNBP4Q8N3X1 1017 aaPredicted RBP16.71■□□□□ 0.27
LMNA-220ENST00000504687 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
LMNA-220ENST00000504687 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
LMNA-220ENST00000504687 ADCY9O60503 1353 aa16.7■□□□□ 0.26
LMNA-220ENST00000504687 F6X3S4 739 aa16.7■□□□□ 0.26
LMNA-220ENST00000504687 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
LMNA-220ENST00000504687 BCL9LQ86UU0 1499 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 KSR2Q6VAB6 950 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 UNC5CLQ8IV45 518 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
LMNA-220ENST00000504687 DNAAF4Q8WXU2 420 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 NECTIN2Q92692 538 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 PDZRN3Q9UPQ7 1066 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 BCL9O00512 1426 aa16.69■□□□□ 0.26
LMNA-220ENST00000504687 DOT1LQ8TEK3 1739 aa16.68■□□□□ 0.26
LMNA-220ENST00000504687 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
LMNA-220ENST00000504687 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
LMNA-220ENST00000504687 NUCB1Q02818 461 aa16.68■□□□□ 0.26
LMNA-220ENST00000504687 VPS72Q15906 364 aa16.68■□□□□ 0.26
LMNA-220ENST00000504687 MEIS3Q99687 375 aa16.68■□□□□ 0.26
LMNA-220ENST00000504687 RBM19Q9Y4C8 960 aaKnown RBP16.68■□□□□ 0.26
LMNA-220ENST00000504687 GNAI2P04899 355 aa16.67■□□□□ 0.26
LMNA-220ENST00000504687 BEND3Q5T5X7 828 aa16.67■□□□□ 0.26
LMNA-220ENST00000504687 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
LMNA-220ENST00000504687 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
LMNA-220ENST00000504687 TEX13AQ9BXU3 409 aaPredicted RBP16.67■□□□□ 0.26
LMNA-220ENST00000504687 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
LMNA-220ENST00000504687 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
LMNA-220ENST00000504687 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
LMNA-220ENST00000504687 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
LMNA-220ENST00000504687 ZNF831Q5JPB2 1677 aa16.66■□□□□ 0.26
LMNA-220ENST00000504687 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
LMNA-220ENST00000504687 PI4KAP2A4QPH2 592 aa16.66■□□□□ 0.26
LMNA-220ENST00000504687 SLC4A10Q6U841 1118 aa16.66■□□□□ 0.26
LMNA-220ENST00000504687 PI4KAP1Q8N8J0 262 aa16.66■□□□□ 0.26
LMNA-220ENST00000504687 BACH2Q9BYV9 841 aa16.66■□□□□ 0.26
LMNA-220ENST00000504687 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
LMNA-220ENST00000504687 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
LMNA-220ENST00000504687 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
LMNA-220ENST00000504687 HMMRO75330 724 aa16.65■□□□□ 0.26
LMNA-220ENST00000504687 C8orf37Q96NL8 207 aa16.65■□□□□ 0.26
LMNA-220ENST00000504687 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
LMNA-220ENST00000504687 USP16Q9Y5T5 823 aa16.65■□□□□ 0.26
LMNA-220ENST00000504687 PDE4AP27815 886 aa16.64■□□□□ 0.25
LMNA-220ENST00000504687 DDB1Q16531 1140 aa16.64■□□□□ 0.25
LMNA-220ENST00000504687 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
LMNA-220ENST00000504687 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
LMNA-220ENST00000504687 UTYO14607 1347 aa16.64■□□□□ 0.25
LMNA-220ENST00000504687 LINS1Q8NG48 757 aa16.63■□□□□ 0.25
LMNA-220ENST00000504687 PIGBQ92521 554 aa16.63■□□□□ 0.25
LMNA-220ENST00000504687 NGLY1Q96IV0 654 aa16.63■□□□□ 0.25
LMNA-220ENST00000504687 C1orf115Q9H7X2 142 aa16.63■□□□□ 0.25
LMNA-220ENST00000504687 RGS17Q9UGC6 210 aaPredicted RBP16.63■□□□□ 0.25
LMNA-220ENST00000504687 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
LMNA-220ENST00000504687 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
LMNA-220ENST00000504687 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
LMNA-220ENST00000504687 COL15A1P39059 1388 aa16.62■□□□□ 0.25
LMNA-220ENST00000504687 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
LMNA-220ENST00000504687 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
LMNA-220ENST00000504687 ATG3Q9NT62 314 aa16.61■□□□□ 0.25
LMNA-220ENST00000504687 TJP1Q07157 1748 aa16.61■□□□□ 0.25
LMNA-220ENST00000504687 RREB1Q92766 1687 aa16.6■□□□□ 0.25
LMNA-220ENST00000504687 ANXA1P04083 346 aa16.6■□□□□ 0.25
LMNA-220ENST00000504687 RGS3P49796 1198 aa16.6■□□□□ 0.25
LMNA-220ENST00000504687 MTX1Q13505 466 aa16.6■□□□□ 0.25
LMNA-220ENST00000504687 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
LMNA-220ENST00000504687 AFF2P51816 1311 aa16.6■□□□□ 0.25
LMNA-220ENST00000504687 COPS6Q7L5N1 327 aa16.59■□□□□ 0.25
LMNA-220ENST00000504687 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
LMNA-220ENST00000504687 PLBD2Q8NHP8 589 aa16.59■□□□□ 0.25
LMNA-220ENST00000504687 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
LMNA-220ENST00000504687 C8orf34Q49A92 452 aa16.58■□□□□ 0.24
LMNA-220ENST00000504687 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
LMNA-220ENST00000504687 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.24
LMNA-220ENST00000504687 ANKRD13DQ6ZTN6 518 aa16.58■□□□□ 0.24
LMNA-220ENST00000504687 NBPF15Q8N660 670 aa16.58■□□□□ 0.24
LMNA-220ENST00000504687 MARCH10Q8NA82 808 aaPredicted RBP16.58■□□□□ 0.24
LMNA-220ENST00000504687 SSH3Q8TE77 659 aa16.58■□□□□ 0.24
LMNA-220ENST00000504687 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
LMNA-220ENST00000504687 AFDNP55196 1824 aaKnown RBP16.58■□□□□ 0.24
LMNA-220ENST00000504687 NEXNQ0ZGT2 675 aa16.57■□□□□ 0.24
LMNA-220ENST00000504687 POLA2Q14181 598 aa16.57■□□□□ 0.24
LMNA-220ENST00000504687 RIC3Q7Z5B4 369 aa16.57■□□□□ 0.24
LMNA-220ENST00000504687 ASAP1Q9ULH1 1129 aa16.57■□□□□ 0.24
LMNA-220ENST00000504687 STARD3NLO95772 234 aa16.56■□□□□ 0.24
LMNA-220ENST00000504687 USP21Q9UK80 565 aa16.56■□□□□ 0.24
LMNA-220ENST00000504687 LRRFIP2Q9Y608 721 aaKnown RBP16.56■□□□□ 0.24
LMNA-220ENST00000504687 ATRNO75882 1429 aa16.55■□□□□ 0.24
LMNA-220ENST00000504687 GRM8O00222 908 aa16.55■□□□□ 0.24
LMNA-220ENST00000504687 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
LMNA-220ENST00000504687 IGKV5-2P06315 115 aa16.55■□□□□ 0.24
LMNA-220ENST00000504687 MYL6BP14649 208 aa16.55■□□□□ 0.24
LMNA-220ENST00000504687 ANKRD45Q5TZF3 282 aa16.55■□□□□ 0.24
LMNA-220ENST00000504687 POTEAQ6S8J7 498 aa16.55■□□□□ 0.24
LMNA-220ENST00000504687 NHSQ6T4R5 1651 aa16.54■□□□□ 0.24
LMNA-220ENST00000504687 NEURL1BA8MQ27 555 aa16.54■□□□□ 0.24
LMNA-220ENST00000504687 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
LMNA-220ENST00000504687 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms