RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 CANXP27824 592 aaKnown RBP16.54■□□□□ 0.24
PDGFRA-204ENST00000504461 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
PDGFRA-204ENST00000504461 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
PDGFRA-204ENST00000504461 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
PDGFRA-204ENST00000504461 GIGYF1O75420 1035 aaPredicted RBP16.53■□□□□ 0.24
PDGFRA-204ENST00000504461 FCHSD2O94868 740 aa16.53■□□□□ 0.24
PDGFRA-204ENST00000504461 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
PDGFRA-204ENST00000504461 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
PDGFRA-204ENST00000504461 BCS1LQ9Y276 419 aa16.53■□□□□ 0.24
PDGFRA-204ENST00000504461 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
PDGFRA-204ENST00000504461 COL15A1P39059 1388 aa16.52■□□□□ 0.24
PDGFRA-204ENST00000504461 BTBD11A6QL63 1104 aa16.52■□□□□ 0.24
PDGFRA-204ENST00000504461 NEFMP07197 916 aa16.52■□□□□ 0.24
PDGFRA-204ENST00000504461 DPEP1P16444 411 aa16.52■□□□□ 0.24
PDGFRA-204ENST00000504461 RALBP1Q15311 655 aa16.52■□□□□ 0.24
PDGFRA-204ENST00000504461 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
PDGFRA-204ENST00000504461 NARFQ9UHQ1 456 aa16.52■□□□□ 0.24
PDGFRA-204ENST00000504461 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
PDGFRA-204ENST00000504461 TM4SF1P30408 202 aa16.51■□□□□ 0.23
PDGFRA-204ENST00000504461 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
PDGFRA-204ENST00000504461 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
PDGFRA-204ENST00000504461 CEMIPQ8WUJ3 1361 aa16.51■□□□□ 0.23
PDGFRA-204ENST00000504461 A0A087WZG4 1122 aa16.5■□□□□ 0.23
PDGFRA-204ENST00000504461 DDR1Q08345 913 aa16.5■□□□□ 0.23
PDGFRA-204ENST00000504461 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
PDGFRA-204ENST00000504461 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
PDGFRA-204ENST00000504461 ATP10DQ9P241 1426 aa16.5■□□□□ 0.23
PDGFRA-204ENST00000504461 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
PDGFRA-204ENST00000504461 ARHGAP27Q6ZUM4 889 aa16.49■□□□□ 0.23
PDGFRA-204ENST00000504461 PIM2Q9P1W9 311 aa16.49■□□□□ 0.23
PDGFRA-204ENST00000504461 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
PDGFRA-204ENST00000504461 MCM10Q7L590 875 aa16.48■□□□□ 0.23
PDGFRA-204ENST00000504461 GPBP1L1Q9HC44 474 aaPredicted RBP16.48■□□□□ 0.23
PDGFRA-204ENST00000504461 NRXN2Q9P2S2 1712 aa16.48■□□□□ 0.23
PDGFRA-204ENST00000504461 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
PDGFRA-204ENST00000504461 NFIXQ14938 502 aa16.47■□□□□ 0.23
PDGFRA-204ENST00000504461 ZNF526Q8TF50 670 aaPredicted RBP16.47■□□□□ 0.23
PDGFRA-204ENST00000504461 KCNQ3O43525 872 aa16.46■□□□□ 0.23
PDGFRA-204ENST00000504461 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
PDGFRA-204ENST00000504461 KCNA3P22001 575 aa16.46■□□□□ 0.23
PDGFRA-204ENST00000504461 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 A1BGP04217 495 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 SERPINB2P05120 415 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 DCTN1Q14203 1278 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 BCL2L12Q9HB09 334 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 ADCY9O60503 1353 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 SCN7AQ01118 1682 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
PDGFRA-204ENST00000504461 SBF1O95248 1867 aa16.44■□□□□ 0.22
PDGFRA-204ENST00000504461 CHRNA5P30532 468 aa16.44■□□□□ 0.22
PDGFRA-204ENST00000504461 TBC1D2BQ9UPU7 963 aa16.44■□□□□ 0.22
PDGFRA-204ENST00000504461 CCDC88AQ3V6T2 1871 aa16.44■□□□□ 0.22
PDGFRA-204ENST00000504461 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
PDGFRA-204ENST00000504461 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
PDGFRA-204ENST00000504461 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
PDGFRA-204ENST00000504461 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
PDGFRA-204ENST00000504461 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
PDGFRA-204ENST00000504461 CACNA1SQ13698 1873 aa16.41■□□□□ 0.22
PDGFRA-204ENST00000504461 ANKRD31Q8N7Z5 1873 aa16.41■□□□□ 0.22
PDGFRA-204ENST00000504461 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
PDGFRA-204ENST00000504461 LAMB4A4D0S4 1761 aa16.41■□□□□ 0.22
PDGFRA-204ENST00000504461 H0YIN7 160 aa16.4■□□□□ 0.22
PDGFRA-204ENST00000504461 NPHP1O15259 732 aa16.4■□□□□ 0.22
PDGFRA-204ENST00000504461 ANP32CO43423 234 aa16.4■□□□□ 0.22
PDGFRA-204ENST00000504461 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
PDGFRA-204ENST00000504461 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
PDGFRA-204ENST00000504461 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
PDGFRA-204ENST00000504461 C2CD5Q86YS7 1000 aa16.39■□□□□ 0.21
PDGFRA-204ENST00000504461 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
PDGFRA-204ENST00000504461 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
PDGFRA-204ENST00000504461 SETDB2Q96T68 719 aa16.39■□□□□ 0.21
PDGFRA-204ENST00000504461 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
PDGFRA-204ENST00000504461 MIS18AQ9NYP9 233 aa16.39■□□□□ 0.21
PDGFRA-204ENST00000504461 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
PDGFRA-204ENST00000504461 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
PDGFRA-204ENST00000504461 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
PDGFRA-204ENST00000504461 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
PDGFRA-204ENST00000504461 CAMTA2O94983 1202 aa16.37■□□□□ 0.21
PDGFRA-204ENST00000504461 PDE6BP35913 854 aa16.37■□□□□ 0.21
PDGFRA-204ENST00000504461 TTLL6Q8N841 843 aa16.37■□□□□ 0.21
PDGFRA-204ENST00000504461 MYBBP1AQ9BQG0 1328 aaKnown RBP16.37■□□□□ 0.21
PDGFRA-204ENST00000504461 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
PDGFRA-204ENST00000504461 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
PDGFRA-204ENST00000504461 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
PDGFRA-204ENST00000504461 CCDC24Q8N4L8 307 aa16.35■□□□□ 0.21
PDGFRA-204ENST00000504461 ZNF622Q969S3 477 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDGFRA-204ENST00000504461 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
PDGFRA-204ENST00000504461 NUP98P52948 1817 aa16.35■□□□□ 0.21
PDGFRA-204ENST00000504461 ST5P78524 1137 aa16.34■□□□□ 0.21
PDGFRA-204ENST00000504461 PRR5LQ6MZQ0 368 aa16.34■□□□□ 0.21
PDGFRA-204ENST00000504461 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
PDGFRA-204ENST00000504461 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
PDGFRA-204ENST00000504461 COL11A2P13942 1736 aaPredicted RBP16.33■□□□□ 0.21
PDGFRA-204ENST00000504461 NBPF26B4DH59 902 aa16.33■□□□□ 0.2
PDGFRA-204ENST00000504461 KIF3CO14782 793 aa16.33■□□□□ 0.2
PDGFRA-204ENST00000504461 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms