RNA–Protein interactions for RNA: ENST00000504376.6

CDH12-202, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDH12, Length 4,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-202ENST00000504376 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 TTC41PQ6P2S7 1318 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 PLEKHG3A1L390 1219 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 F6X3S4 739 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 ADCY5O95622 1261 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH12-202ENST00000504376 UPF3BQ9BZI7 483 aaKnown RBP9.53□□□□□ -0.88
CDH12-202ENST00000504376 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 USP31Q70CQ4 1352 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 USP6P35125 1406 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 SURF6O75683 361 aaKnown RBP9.53□□□□□ -0.88
CDH12-202ENST00000504376 F13A1P00488 732 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 CYP46A1Q9Y6A2 500 aa9.53□□□□□ -0.88
CDH12-202ENST00000504376 KRT85P78386 507 aa9.52□□□□□ -0.89
CDH12-202ENST00000504376 LRRFIP2Q9Y608 721 aaKnown RBP9.52□□□□□ -0.89
CDH12-202ENST00000504376 KRT24Q2M2I5 525 aa9.52□□□□□ -0.89
CDH12-202ENST00000504376 ACEP12821 1306 aa9.52□□□□□ -0.89
CDH12-202ENST00000504376 SALL3Q9BXA9 1300 aa9.52□□□□□ -0.89
CDH12-202ENST00000504376 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
CDH12-202ENST00000504376 FIBPO43427 364 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 CAVIN2O95810 425 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 CLASRPQ8N2M8 674 aaKnown RBP9.51□□□□□ -0.89
CDH12-202ENST00000504376 MAP3K5Q99683 1374 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 SGSM2O43147 1006 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 KDM4AO75164 1064 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 HDGFL1Q5TGJ6 251 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 CHMP4CQ96CF2 233 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 NGDNQ8NEJ9 315 aaKnown RBP9.51□□□□□ -0.89
CDH12-202ENST00000504376 SSH3Q8TE77 659 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 PDRG1Q9NUG6 133 aa9.51□□□□□ -0.89
CDH12-202ENST00000504376 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
CDH12-202ENST00000504376 HOXB7P09629 217 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 TAF7Q15545 349 aaPredicted RBP9.5□□□□□ -0.89
CDH12-202ENST00000504376 VPS53Q5VIR6 699 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 TM6SF1Q9BZW5 370 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 METP08581 1390 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 KDRP35968 1356 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 MAP3K11Q16584 847 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 MTHFSDQ2M296 383 aaKnown RBP9.5□□□□□ -0.89
CDH12-202ENST00000504376 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
CDH12-202ENST00000504376 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
CDH12-202ENST00000504376 DRC7Q8IY82 874 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 PALD1Q9ULE6 856 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 NALCNQ8IZF0 1738 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 FMN2Q9NZ56 1722 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 IFIT2P09913 472 aaKnown RBP9.5□□□□□ -0.89
CDH12-202ENST00000504376 HSP90AB2PQ58FF8 381 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 NUP62CLQ9H1M0 184 aa9.5□□□□□ -0.89
CDH12-202ENST00000504376 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 GTF2F1P35269 517 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDH12-202ENST00000504376 G2E3Q7L622 706 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 SCAND2PQ9GZW5 306 aaPredicted RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 CNPY2Q9Y2B0 182 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 EID1Q9Y6B2 187 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 FAM208AQ9UK61 1670 aaKnown RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 TNRQ92752 1358 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 RPAP1Q9BWH6 1393 aaPredicted RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 MAP3K19Q56UN5 1328 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 IGSF1Q8N6C5 1336 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 VPS37CA5D8V6 355 aaPredicted RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 CASTP20810 708 aaKnown RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 DDX19AQ9NUU7 478 aaKnown RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 CCDC171Q6TFL3 1326 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 SRGAP3O43295 1099 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 NRDCO43847 1150 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 PDCL2Q8N4E4 241 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 FAM200AQ8TCP9 573 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 SNX14Q9Y5W7 946 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 N4BP2Q86UW6 1770 aaPredicted RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 SOX12O15370 315 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 SYT1P21579 422 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 AK2P54819 239 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 SPTLC3Q9NUV7 552 aa9.49□□□□□ -0.89
CDH12-202ENST00000504376 NSFL1CQ9UNZ2 370 aaKnown RBP9.49□□□□□ -0.89
CDH12-202ENST00000504376 DHX8Q14562 1220 aaKnown RBP9.48□□□□□ -0.89
CDH12-202ENST00000504376 GDPD2Q9HCC8 539 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 IL1RAPL2Q9NP60 686 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 GJB2P29033 226 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 TSHZ3Q63HK5 1081 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 JAKMIP1Q96N16 626 aaKnown RBP9.48□□□□□ -0.89
CDH12-202ENST00000504376 NRXN3Q9Y4C0 1643 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 GADD45BO75293 160 aaPredicted RBP9.48□□□□□ -0.89
CDH12-202ENST00000504376 UTP14CQ5TAP6 766 aaKnown RBP9.48□□□□□ -0.89
CDH12-202ENST00000504376 PPP1R42Q7Z4L9 355 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.48□□□□□ -0.89
CDH12-202ENST00000504376 NUTM1Q86Y26 1132 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 EVI5LQ96CN4 794 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 GTPBP4Q9BZE4 634 aaKnown RBP9.48□□□□□ -0.89
CDH12-202ENST00000504376 MIS18AQ9NYP9 233 aa9.48□□□□□ -0.89
CDH12-202ENST00000504376 NEMFO60524 1076 aa9.47□□□□□ -0.89
CDH12-202ENST00000504376 MLECQ14165 292 aa9.47□□□□□ -0.89
CDH12-202ENST00000504376 KRT32Q14532 448 aa9.47□□□□□ -0.89
CDH12-202ENST00000504376 TNMDQ9H2S6 317 aa9.47□□□□□ -0.89
CDH12-202ENST00000504376 ECHDC1Q9NTX5 307 aa9.47□□□□□ -0.89
CDH12-202ENST00000504376 ELP1O95163 1332 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms