RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 PKD1L3Q7Z443 1732 aa12.26□□□□□ -0.45
SSBP2-202ENST00000504136 FAM205CA6NFA0 338 aa12.26□□□□□ -0.45
SSBP2-202ENST00000504136 AMPHP49418 695 aa12.26□□□□□ -0.45
SSBP2-202ENST00000504136 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
SSBP2-202ENST00000504136 HS3ST6Q96QI5 342 aa12.26□□□□□ -0.45
SSBP2-202ENST00000504136 NSD2O96028 1365 aa12.26□□□□□ -0.45
SSBP2-202ENST00000504136 SMG6Q86US8 1419 aaKnown RBP12.26□□□□□ -0.45
SSBP2-202ENST00000504136 CASZ1Q86V15 1759 aa12.25□□□□□ -0.45
SSBP2-202ENST00000504136 PDIA6Q15084 440 aa12.25□□□□□ -0.45
SSBP2-202ENST00000504136 PTF1AQ7RTS3 328 aa12.25□□□□□ -0.45
SSBP2-202ENST00000504136 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
SSBP2-202ENST00000504136 DOT1LQ8TEK3 1739 aa12.24□□□□□ -0.45
SSBP2-202ENST00000504136 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
SSBP2-202ENST00000504136 NBPF6Q5VWK0 638 aa12.23□□□□□ -0.45
SSBP2-202ENST00000504136 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
SSBP2-202ENST00000504136 NBPF4Q96M43 638 aa12.23□□□□□ -0.45
SSBP2-202ENST00000504136 LY75O60449 1722 aa12.23□□□□□ -0.45
SSBP2-202ENST00000504136 PSDA5PKW4 1024 aaPredicted RBP12.22□□□□□ -0.45
SSBP2-202ENST00000504136 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
SSBP2-202ENST00000504136 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
SSBP2-202ENST00000504136 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
SSBP2-202ENST00000504136 KRTAP3-3Q9BYR6 98 aa12.22□□□□□ -0.45
SSBP2-202ENST00000504136 KRTAP3-2Q9BYR7 98 aa12.22□□□□□ -0.45
SSBP2-202ENST00000504136 EMILIN1Q9Y6C2 1016 aa12.22□□□□□ -0.45
SSBP2-202ENST00000504136 QSER1Q2KHR3 1735 aa12.21□□□□□ -0.45
SSBP2-202ENST00000504136 KCNQ2O43526 872 aa12.21□□□□□ -0.45
SSBP2-202ENST00000504136 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.45
SSBP2-202ENST00000504136 POLKQ9UBT6 870 aa12.21□□□□□ -0.45
SSBP2-202ENST00000504136 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
SSBP2-202ENST00000504136 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
SSBP2-202ENST00000504136 PANK3Q9H999 370 aa12.2□□□□□ -0.46
SSBP2-202ENST00000504136 KIF7Q2M1P5 1343 aa12.19□□□□□ -0.46
SSBP2-202ENST00000504136 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
SSBP2-202ENST00000504136 TOGARAM1Q9Y4F4 1720 aa12.19□□□□□ -0.46
SSBP2-202ENST00000504136 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
SSBP2-202ENST00000504136 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
SSBP2-202ENST00000504136 PTGER2P43116 358 aa12.17□□□□□ -0.46
SSBP2-202ENST00000504136 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
SSBP2-202ENST00000504136 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
SSBP2-202ENST00000504136 TATP17735 454 aaPredicted RBP12.16□□□□□ -0.46
SSBP2-202ENST00000504136 FOSBP53539 338 aa12.16□□□□□ -0.46
SSBP2-202ENST00000504136 RAPGEF4Q8WZA2 1011 aa12.16□□□□□ -0.46
SSBP2-202ENST00000504136 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
SSBP2-202ENST00000504136 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
SSBP2-202ENST00000504136 ITGB4P16144 1822 aa12.16□□□□□ -0.46
SSBP2-202ENST00000504136 IGSF1Q8N6C5 1336 aa12.15□□□□□ -0.46
SSBP2-202ENST00000504136 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
SSBP2-202ENST00000504136 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
SSBP2-202ENST00000504136 ZNF687Q8N1G0 1237 aa12.15□□□□□ -0.46
SSBP2-202ENST00000504136 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
SSBP2-202ENST00000504136 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
SSBP2-202ENST00000504136 EYA1Q99502 592 aa12.15□□□□□ -0.46
SSBP2-202ENST00000504136 TUBGCP6Q96RT7 1819 aa12.14□□□□□ -0.47
SSBP2-202ENST00000504136 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
SSBP2-202ENST00000504136 CYP27B1O15528 508 aa12.14□□□□□ -0.47
SSBP2-202ENST00000504136 EIF4A2Q14240 407 aaKnown RBP12.14□□□□□ -0.47
SSBP2-202ENST00000504136 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
SSBP2-202ENST00000504136 POLR3GLQ9BT43 218 aa12.13□□□□□ -0.47
SSBP2-202ENST00000504136 LRRC4BQ9NT99 713 aa12.13□□□□□ -0.47
SSBP2-202ENST00000504136 KNSTRNQ9Y448 316 aa12.13□□□□□ -0.47
SSBP2-202ENST00000504136 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
SSBP2-202ENST00000504136 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
SSBP2-202ENST00000504136 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
SSBP2-202ENST00000504136 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
SSBP2-202ENST00000504136 KDRP35968 1356 aa12.12□□□□□ -0.47
SSBP2-202ENST00000504136 C5P01031 1676 aa12.11□□□□□ -0.47
SSBP2-202ENST00000504136 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
SSBP2-202ENST00000504136 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
SSBP2-202ENST00000504136 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
SSBP2-202ENST00000504136 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
SSBP2-202ENST00000504136 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
SSBP2-202ENST00000504136 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
SSBP2-202ENST00000504136 PHF14O94880 888 aa12.1□□□□□ -0.47
SSBP2-202ENST00000504136 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
SSBP2-202ENST00000504136 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
SSBP2-202ENST00000504136 ZNF827Q17R98 1081 aa12.09□□□□□ -0.47
SSBP2-202ENST00000504136 PDGFDQ9GZP0 370 aaPredicted RBP12.09□□□□□ -0.47
SSBP2-202ENST00000504136 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
SSBP2-202ENST00000504136 DDX12PQ92771 950 aa12.08□□□□□ -0.48
SSBP2-202ENST00000504136 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
SSBP2-202ENST00000504136 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
SSBP2-202ENST00000504136 PHKG2P15735 406 aa12.07□□□□□ -0.48
SSBP2-202ENST00000504136 IL13P35225 146 aa12.07□□□□□ -0.48
SSBP2-202ENST00000504136 MTFR1LQ9H019 292 aa12.07□□□□□ -0.48
SSBP2-202ENST00000504136 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
SSBP2-202ENST00000504136 PALLDQ8WX93 1383 aa12.06□□□□□ -0.48
SSBP2-202ENST00000504136 MAP3K5Q99683 1374 aa12.06□□□□□ -0.48
SSBP2-202ENST00000504136 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
SSBP2-202ENST00000504136 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
SSBP2-202ENST00000504136 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
SSBP2-202ENST00000504136 ZDHHC16Q969W1 377 aa12.06□□□□□ -0.48
SSBP2-202ENST00000504136 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
SSBP2-202ENST00000504136 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
SSBP2-202ENST00000504136 PIGBQ92521 554 aa12.05□□□□□ -0.48
SSBP2-202ENST00000504136 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
SSBP2-202ENST00000504136 EPAS1Q99814 870 aa12.05□□□□□ -0.48
SSBP2-202ENST00000504136 ADAM33Q9BZ11 813 aa12.05□□□□□ -0.48
SSBP2-202ENST00000504136 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
SSBP2-202ENST00000504136 UBR3Q6ZT12 1888 aa12.05□□□□□ -0.48
SSBP2-202ENST00000504136 PNPLA7Q6ZV29 1317 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms