RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
SNF8-203ENST00000504000 HOXC9P31274 260 aa18.13■□□□□ 0.49
SNF8-203ENST00000504000 TSHZ3Q63HK5 1081 aa18.13■□□□□ 0.49
SNF8-203ENST00000504000 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
SNF8-203ENST00000504000 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
SNF8-203ENST00000504000 RAD50Q92878 1312 aa18.13■□□□□ 0.49
SNF8-203ENST00000504000 USP42Q9H9J4 1324 aaKnown RBP18.13■□□□□ 0.49
SNF8-203ENST00000504000 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 TSPY26PQ9H489 355 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 SGSM2O43147 1006 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 UVSSAQ2YD98 709 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 HSP90AB4PQ58FF6 505 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 PI4K2BQ8TCG2 481 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 KIF1BPQ96EK5 621 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 PDCL3Q9H2J4 239 aa18.12■□□□□ 0.49
SNF8-203ENST00000504000 CEMIPQ8WUJ3 1361 aa18.11■□□□□ 0.49
SNF8-203ENST00000504000 CRYBG1Q9Y4K1 1723 aa18.11■□□□□ 0.49
SNF8-203ENST00000504000 SOX12O15370 315 aa18.1■□□□□ 0.49
SNF8-203ENST00000504000 LETM1O95202 739 aaPredicted RBP18.1■□□□□ 0.49
SNF8-203ENST00000504000 MED1Q15648 1581 aaPredicted RBP18.1■□□□□ 0.49
SNF8-203ENST00000504000 MARF1Q9Y4F3 1742 aaKnown RBP18.1■□□□□ 0.49
SNF8-203ENST00000504000 RHPN1Q8TCX5 695 aa18.09■□□□□ 0.49
SNF8-203ENST00000504000 TTC14Q96N46 770 aa18.09■□□□□ 0.49
SNF8-203ENST00000504000 NLRP6P59044 892 aa18.09■□□□□ 0.49
SNF8-203ENST00000504000 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
SNF8-203ENST00000504000 PPP1R42Q7Z4L9 355 aa18.09■□□□□ 0.49
SNF8-203ENST00000504000 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
SNF8-203ENST00000504000 TTC41PQ6P2S7 1318 aa18.09■□□□□ 0.49
SNF8-203ENST00000504000 RPAP1Q9BWH6 1393 aaPredicted RBP18.08■□□□□ 0.48
SNF8-203ENST00000504000 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
SNF8-203ENST00000504000 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
SNF8-203ENST00000504000 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
SNF8-203ENST00000504000 LSG1Q9H089 658 aaKnown RBP18.07■□□□□ 0.48
SNF8-203ENST00000504000 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.07■□□□□ 0.48
SNF8-203ENST00000504000 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
SNF8-203ENST00000504000 MTX1Q13505 466 aa18.07■□□□□ 0.48
SNF8-203ENST00000504000 USP48Q86UV5 1035 aa18.07■□□□□ 0.48
SNF8-203ENST00000504000 CHAMP1Q96JM3 812 aa18.07■□□□□ 0.48
SNF8-203ENST00000504000 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
SNF8-203ENST00000504000 SNX14Q9Y5W7 946 aa18.07■□□□□ 0.48
SNF8-203ENST00000504000 PDIA4P13667 645 aaKnown RBP18.06■□□□□ 0.48
SNF8-203ENST00000504000 MAP7D2Q96T17 732 aa18.06■□□□□ 0.48
SNF8-203ENST00000504000 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
SNF8-203ENST00000504000 FOXD4L5Q5VV16 416 aaPredicted RBP18.05■□□□□ 0.48
SNF8-203ENST00000504000 FOXD4L4Q8WXT5 416 aaPredicted RBP18.05■□□□□ 0.48
SNF8-203ENST00000504000 IL25Q9H293 177 aa18.05■□□□□ 0.48
SNF8-203ENST00000504000 IL1RAPL2Q9NP60 686 aa18.05■□□□□ 0.48
SNF8-203ENST00000504000 LIMCH1Q9UPQ0 1083 aa18.05■□□□□ 0.48
SNF8-203ENST00000504000 ZSCAN22P10073 491 aaPredicted RBP18.05■□□□□ 0.48
SNF8-203ENST00000504000 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
SNF8-203ENST00000504000 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
SNF8-203ENST00000504000 GLRX3O76003 335 aaKnown RBP18.04■□□□□ 0.48
SNF8-203ENST00000504000 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
SNF8-203ENST00000504000 CCDC183Q5T5S1 534 aa18.04■□□□□ 0.48
SNF8-203ENST00000504000 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
SNF8-203ENST00000504000 KCNB2Q92953 911 aa18.04■□□□□ 0.48
SNF8-203ENST00000504000 TM6SF1Q9BZW5 370 aa18.04■□□□□ 0.48
SNF8-203ENST00000504000 PHAXQ9H814 394 aaKnown RBP18.04■□□□□ 0.48
SNF8-203ENST00000504000 HDAC5Q9UQL6 1122 aa18.04■□□□□ 0.48
SNF8-203ENST00000504000 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
SNF8-203ENST00000504000 UBE2HP62256 183 aa18.03■□□□□ 0.48
SNF8-203ENST00000504000 RUFY2Q8WXA3 655 aa18.03■□□□□ 0.48
SNF8-203ENST00000504000 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
SNF8-203ENST00000504000 NECTIN2Q92692 538 aa18.03■□□□□ 0.48
SNF8-203ENST00000504000 ADGRL3Q9HAR2 1447 aa18.03■□□□□ 0.48
SNF8-203ENST00000504000 STX6O43752 255 aa18.02■□□□□ 0.48
SNF8-203ENST00000504000 GADD45BO75293 160 aaPredicted RBP18.02■□□□□ 0.48
SNF8-203ENST00000504000 AK2P54819 239 aa18.01■□□□□ 0.47
SNF8-203ENST00000504000 VPS53Q5VIR6 699 aa18.01■□□□□ 0.47
SNF8-203ENST00000504000 MTERF4Q7Z6M4 381 aaKnown RBP18.01■□□□□ 0.47
SNF8-203ENST00000504000 ZSCAN31Q96LW9 406 aaPredicted RBP18.01■□□□□ 0.47
SNF8-203ENST00000504000 R3HCC1Q9Y3T6 440 aaKnown RBP18.01■□□□□ 0.47
SNF8-203ENST00000504000 DYNC1I1O14576 645 aa18.01■□□□□ 0.47
SNF8-203ENST00000504000 SYT1P21579 422 aa18.01■□□□□ 0.47
SNF8-203ENST00000504000 XPCQ01831 940 aaPredicted RBP18.01■□□□□ 0.47
SNF8-203ENST00000504000 NOL8Q76FK4 1167 aaKnown RBP18.01■□□□□ 0.47
SNF8-203ENST00000504000 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
SNF8-203ENST00000504000 RNF214Q8ND24 703 aa18.01■□□□□ 0.47
SNF8-203ENST00000504000 IP6K1Q92551 441 aa18.01■□□□□ 0.47
SNF8-203ENST00000504000 SH2B1Q9NRF2 756 aaPredicted RBP18.01■□□□□ 0.47
SNF8-203ENST00000504000 NBPF7P0C2Y1 421 aaPredicted RBP18■□□□□ 0.47
SNF8-203ENST00000504000 ERC1Q8IUD2 1116 aa18■□□□□ 0.47
SNF8-203ENST00000504000 THEMISQ8N1K5 641 aaPredicted RBP18■□□□□ 0.47
SNF8-203ENST00000504000 OVOS2A0A0G2JMS6 1433 aa18■□□□□ 0.47
SNF8-203ENST00000504000 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 F13A1P00488 732 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 KIAA2012Q0VF49 1180 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 SASS6Q6UVJ0 657 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 HYPKQ9NX55 129 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 PHRF1Q9P1Y6 1649 aaKnown RBP17.99■□□□□ 0.47
SNF8-203ENST00000504000 ZSWIM6Q9HCJ5 1215 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 SMC3Q9UQE7 1217 aa17.99■□□□□ 0.47
SNF8-203ENST00000504000 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
SNF8-203ENST00000504000 PI4KAP2A4QPH2 592 aa17.98■□□□□ 0.47
SNF8-203ENST00000504000 CLASRPQ8N2M8 674 aaKnown RBP17.98■□□□□ 0.47
SNF8-203ENST00000504000 PI4KAP1Q8N8J0 262 aa17.98■□□□□ 0.47
SNF8-203ENST00000504000 GPATCH3Q96I76 525 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms