RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 NEFMP07197 916 aa29.38■■■□□ 2.29
LSM6-203ENST00000503982 ZNF790Q6PG37 636 aa29.38■■■□□ 2.29
LSM6-203ENST00000503982 BCS1LQ9Y276 419 aa29.38■■■□□ 2.29
LSM6-203ENST00000503982 ZNF330Q9Y3S2 320 aaPredicted RBP29.37■■■□□ 2.29
LSM6-203ENST00000503982 KIAA1551Q9HCM1 1747 aa29.37■■■□□ 2.29
LSM6-203ENST00000503982 BTBD11A6QL63 1104 aa29.36■■■□□ 2.29
LSM6-203ENST00000503982 FCHSD2O94868 740 aa29.36■■■□□ 2.29
LSM6-203ENST00000503982 ZNF496Q96IT1 587 aaPredicted RBP29.36■■■□□ 2.29
LSM6-203ENST00000503982 GIGYF1O75420 1035 aaPredicted RBP29.35■■■□□ 2.29
LSM6-203ENST00000503982 DPEP1P16444 411 aa29.35■■■□□ 2.29
LSM6-203ENST00000503982 FMNL2Q96PY5 1086 aa29.35■■■□□ 2.29
LSM6-203ENST00000503982 HEG1Q9ULI3 1381 aa29.35■■■□□ 2.29
LSM6-203ENST00000503982 DDR1Q08345 913 aa29.34■■■□□ 2.29
LSM6-203ENST00000503982 NPM2Q86SE8 214 aaKnown RBP29.34■■■□□ 2.29
LSM6-203ENST00000503982 TEX13AQ9BXU3 409 aaPredicted RBP29.34■■■□□ 2.29
LSM6-203ENST00000503982 NARFQ9UHQ1 456 aa29.34■■■□□ 2.29
LSM6-203ENST00000503982 MCM10Q7L590 875 aa29.33■■■□□ 2.29
LSM6-203ENST00000503982 ATP10DQ9P241 1426 aa29.31■■■□□ 2.28
LSM6-203ENST00000503982 CEMIPQ8WUJ3 1361 aa29.31■■■□□ 2.28
LSM6-203ENST00000503982 A0A087WZG4 1122 aa29.3■■■□□ 2.28
LSM6-203ENST00000503982 ZNF526Q8TF50 670 aaPredicted RBP29.3■■■□□ 2.28
LSM6-203ENST00000503982 AFDNP55196 1824 aaKnown RBP29.29■■■□□ 2.28
LSM6-203ENST00000503982 POLRMTO00411 1230 aaKnown RBP29.29■■■□□ 2.28
LSM6-203ENST00000503982 BRCA1P38398 1863 aaKnown RBP29.29■■■□□ 2.28
LSM6-203ENST00000503982 KCNQ3O43525 872 aa29.28■■■□□ 2.28
LSM6-203ENST00000503982 TM4SF1P30408 202 aa29.28■■■□□ 2.28
LSM6-203ENST00000503982 DCTN1Q14203 1278 aa29.28■■■□□ 2.28
LSM6-203ENST00000503982 ARHGAP27Q6ZUM4 889 aa29.28■■■□□ 2.28
LSM6-203ENST00000503982 C1QTNF8P60827 252 aa29.27■■■□□ 2.28
LSM6-203ENST00000503982 BICDL1Q6ZP65 573 aa29.27■■■□□ 2.28
LSM6-203ENST00000503982 DLG5Q8TDM6 1919 aa29.27■■■□□ 2.28
LSM6-203ENST00000503982 NFIXQ14938 502 aa29.26■■■□□ 2.27
LSM6-203ENST00000503982 GPBP1L1Q9HC44 474 aaPredicted RBP29.26■■■□□ 2.27
LSM6-203ENST00000503982 PIM2Q9P1W9 311 aa29.26■■■□□ 2.27
LSM6-203ENST00000503982 EIF5P55010 431 aaKnown RBP29.24■■■□□ 2.27
LSM6-203ENST00000503982 ARFGEF1Q9Y6D6 1849 aa29.24■■■□□ 2.27
LSM6-203ENST00000503982 A1BGP04217 495 aa29.23■■■□□ 2.27
LSM6-203ENST00000503982 SERPINB2P05120 415 aa29.23■■■□□ 2.27
LSM6-203ENST00000503982 CHRNA5P30532 468 aa29.23■■■□□ 2.27
LSM6-203ENST00000503982 TBC1D2BQ9UPU7 963 aa29.23■■■□□ 2.27
LSM6-203ENST00000503982 MAPK8IP3Q9UPT6 1336 aa29.22■■■□□ 2.27
LSM6-203ENST00000503982 HTATSF1O43719 755 aaKnown RBP29.22■■■□□ 2.27
LSM6-203ENST00000503982 DDX10Q13206 875 aaKnown RBP29.22■■■□□ 2.27
LSM6-203ENST00000503982 DALRD3Q5D0E6 543 aaKnown RBP29.22■■■□□ 2.27
LSM6-203ENST00000503982 PNNQ9H307 717 aaKnown RBP29.22■■■□□ 2.27
LSM6-203ENST00000503982 BCL2L12Q9HB09 334 aa29.22■■■□□ 2.27
LSM6-203ENST00000503982 SENP3-EIF4A1A0A087X0R7 540 aa29.21■■■□□ 2.27
LSM6-203ENST00000503982 IL6STP40189 918 aaPredicted RBP29.21■■■□□ 2.27
LSM6-203ENST00000503982 KCNA3P22001 575 aa29.2■■■□□ 2.26
LSM6-203ENST00000503982 SCN7AQ01118 1682 aa29.2■■■□□ 2.26
LSM6-203ENST00000503982 ADCY9O60503 1353 aa29.19■■■□□ 2.26
LSM6-203ENST00000503982 NPHP1O15259 732 aa29.19■■■□□ 2.26
LSM6-203ENST00000503982 SNRPA1P09661 255 aaKnown RBP29.18■■■□□ 2.26
LSM6-203ENST00000503982 RALBP1Q15311 655 aa29.18■■■□□ 2.26
LSM6-203ENST00000503982 USP16Q9Y5T5 823 aa29.18■■■□□ 2.26
LSM6-203ENST00000503982 NRXN2Q9P2S2 1712 aa29.17■■■□□ 2.26
LSM6-203ENST00000503982 PIP4K2AP48426 406 aaPredicted RBP29.17■■■□□ 2.26
LSM6-203ENST00000503982 TAF7Q15545 349 aaPredicted RBP29.17■■■□□ 2.26
LSM6-203ENST00000503982 PRAMEF22A3QJZ6 481 aa29.16■■■□□ 2.26
LSM6-203ENST00000503982 TBC1D9BQ66K14 1250 aa29.16■■■□□ 2.26
LSM6-203ENST00000503982 DZIP3Q86Y13 1208 aaKnown RBP29.15■■■□□ 2.26
LSM6-203ENST00000503982 MIS18AQ9NYP9 233 aa29.15■■■□□ 2.26
LSM6-203ENST00000503982 NFE2L2Q16236 605 aa29.14■■■□□ 2.26
LSM6-203ENST00000503982 C2CD5Q86YS7 1000 aa29.13■■■□□ 2.25
LSM6-203ENST00000503982 BCORQ6W2J9 1755 aa29.13■■■□□ 2.25
LSM6-203ENST00000503982 PNISRQ8TF01 805 aaKnown RBP29.12■■■□□ 2.25
LSM6-203ENST00000503982 PLEKHF1Q96S99 279 aa29.12■■■□□ 2.25
LSM6-203ENST00000503982 H0YIN7 160 aa29.11■■■□□ 2.25
LSM6-203ENST00000503982 SETDB2Q96T68 719 aa29.11■■■□□ 2.25
LSM6-203ENST00000503982 CARMIL3Q8ND23 1372 aa29.11■■■□□ 2.25
LSM6-203ENST00000503982 DLEC1Q9Y238 1755 aa29.11■■■□□ 2.25
LSM6-203ENST00000503982 LAMB4A4D0S4 1761 aa29.09■■■□□ 2.25
LSM6-203ENST00000503982 CAMTA2O94983 1202 aa29.09■■■□□ 2.25
LSM6-203ENST00000503982 C9orf131Q5VYM1 1079 aa29.09■■■□□ 2.25
LSM6-203ENST00000503982 CCDC24Q8N4L8 307 aa29.09■■■□□ 2.25
LSM6-203ENST00000503982 THUMPD2Q9BTF0 503 aaKnown RBP29.09■■■□□ 2.25
LSM6-203ENST00000503982 KDM3BQ7LBC6 1761 aa29.08■■■□□ 2.25
LSM6-203ENST00000503982 ANKRD31Q8N7Z5 1873 aa29.07■■■□□ 2.24
LSM6-203ENST00000503982 ZNF622Q969S3 477 aaKnown RBP eCLIP29.07■■■□□ 2.24
LSM6-203ENST00000503982 MYBBP1AQ9BQG0 1328 aaKnown RBP29.07■■■□□ 2.24
LSM6-203ENST00000503982 ZNF652Q9Y2D9 606 aa29.07■■■□□ 2.24
LSM6-203ENST00000503982 TTLL6Q8N841 843 aa29.06■■■□□ 2.24
LSM6-203ENST00000503982 CNBD1Q8NA66 436 aa29.06■■■□□ 2.24
LSM6-203ENST00000503982 RNF181Q9P0P0 153 aa29.06■■■□□ 2.24
LSM6-203ENST00000503982 PDE6BP35913 854 aa29.05■■■□□ 2.24
LSM6-203ENST00000503982 ST5P78524 1137 aa29.05■■■□□ 2.24
LSM6-203ENST00000503982 PRR5LQ6MZQ0 368 aa29.05■■■□□ 2.24
LSM6-203ENST00000503982 NGEFQ8N5V2 710 aa29.04■■■□□ 2.24
LSM6-203ENST00000503982 SBF1O95248 1867 aa29.04■■■□□ 2.24
LSM6-203ENST00000503982 CACNA1SQ13698 1873 aa29.04■■■□□ 2.24
LSM6-203ENST00000503982 RIPK4P57078 832 aa29.03■■■□□ 2.24
LSM6-203ENST00000503982 BRIP1Q9BX63 1249 aa29.03■■■□□ 2.24
LSM6-203ENST00000503982 WDR43Q15061 677 aaKnown RBP eCLIP29.02■■■□□ 2.24
LSM6-203ENST00000503982 ZNF219Q9P2Y4 722 aaPredicted RBP29.02■■■□□ 2.24
LSM6-203ENST00000503982 RASSF7Q02833 373 aa29.01■■■□□ 2.23
LSM6-203ENST00000503982 PDZRN3Q9UPQ7 1066 aa29.01■■■□□ 2.23
LSM6-203ENST00000503982 CCDC88AQ3V6T2 1871 aa29.01■■■□□ 2.23
LSM6-203ENST00000503982 NBPF26B4DH59 902 aa29■■■□□ 2.23
LSM6-203ENST00000503982 NBPF10Q6P3W6 841 aaKnown RBP29■■■□□ 2.23
LSM6-203ENST00000503982 NBPF5PQ86XG9 351 aaPredicted RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms