RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 PARP3Q9Y6F1 533 aa12.25□□□□□ -0.45
PROM1-204ENST00000503884 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
PROM1-204ENST00000503884 SIPA1L3O60292 1781 aaPredicted RBP12.24□□□□□ -0.45
PROM1-204ENST00000503884 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
PROM1-204ENST00000503884 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
PROM1-204ENST00000503884 DLEC1Q9Y238 1755 aa12.24□□□□□ -0.45
PROM1-204ENST00000503884 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
PROM1-204ENST00000503884 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
PROM1-204ENST00000503884 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
PROM1-204ENST00000503884 CACNB1Q02641 598 aaPredicted RBP12.23□□□□□ -0.45
PROM1-204ENST00000503884 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
PROM1-204ENST00000503884 FCHSD2O94868 740 aa12.22□□□□□ -0.45
PROM1-204ENST00000503884 HMOX1P09601 288 aa12.22□□□□□ -0.45
PROM1-204ENST00000503884 MTHFSDQ2M296 383 aaKnown RBP12.22□□□□□ -0.45
PROM1-204ENST00000503884 SLC39A6Q13433 755 aa12.21□□□□□ -0.45
PROM1-204ENST00000503884 USPL1Q5W0Q7 1092 aa12.21□□□□□ -0.45
PROM1-204ENST00000503884 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
PROM1-204ENST00000503884 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
PROM1-204ENST00000503884 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
PROM1-204ENST00000503884 NARFQ9UHQ1 456 aa12.21□□□□□ -0.45
PROM1-204ENST00000503884 COL15A1P39059 1388 aa12.2□□□□□ -0.46
PROM1-204ENST00000503884 DIAPH1O60610 1272 aaKnown RBP12.2□□□□□ -0.46
PROM1-204ENST00000503884 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
PROM1-204ENST00000503884 ZBTB1Q9Y2K1 713 aa12.2□□□□□ -0.46
PROM1-204ENST00000503884 TOMM70O94826 608 aa12.19□□□□□ -0.46
PROM1-204ENST00000503884 CHRNA5P30532 468 aa12.19□□□□□ -0.46
PROM1-204ENST00000503884 DALRD3Q5D0E6 543 aaKnown RBP12.19□□□□□ -0.46
PROM1-204ENST00000503884 ZPR1O75312 459 aa12.18□□□□□ -0.46
PROM1-204ENST00000503884 NFIXQ14938 502 aa12.18□□□□□ -0.46
PROM1-204ENST00000503884 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
PROM1-204ENST00000503884 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
PROM1-204ENST00000503884 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
PROM1-204ENST00000503884 ANKRD31Q8N7Z5 1873 aa12.18□□□□□ -0.46
PROM1-204ENST00000503884 CCDC88AQ3V6T2 1871 aa12.17□□□□□ -0.46
PROM1-204ENST00000503884 SCN7AQ01118 1682 aa12.17□□□□□ -0.46
PROM1-204ENST00000503884 TNRC6CQ9HCJ0 1690 aaKnown RBP12.17□□□□□ -0.46
PROM1-204ENST00000503884 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
PROM1-204ENST00000503884 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
PROM1-204ENST00000503884 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
PROM1-204ENST00000503884 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
PROM1-204ENST00000503884 DNAJC5GQ8N7S2 189 aa12.16□□□□□ -0.46
PROM1-204ENST00000503884 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
PROM1-204ENST00000503884 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
PROM1-204ENST00000503884 PCNTO95613 3336 aa12.16□□□□□ -0.46
PROM1-204ENST00000503884 APLP1P51693 650 aa12.15□□□□□ -0.46
PROM1-204ENST00000503884 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
PROM1-204ENST00000503884 CARMIL3Q8ND23 1372 aa12.15□□□□□ -0.46
PROM1-204ENST00000503884 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
PROM1-204ENST00000503884 COL11A2P13942 1736 aaPredicted RBP12.14□□□□□ -0.47
PROM1-204ENST00000503884 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
PROM1-204ENST00000503884 SERPINB2P05120 415 aa12.14□□□□□ -0.47
PROM1-204ENST00000503884 PRELPP51888 382 aa12.14□□□□□ -0.47
PROM1-204ENST00000503884 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
PROM1-204ENST00000503884 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
PROM1-204ENST00000503884 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
PROM1-204ENST00000503884 BCORQ6W2J9 1755 aa12.14□□□□□ -0.47
PROM1-204ENST00000503884 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
PROM1-204ENST00000503884 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
PROM1-204ENST00000503884 FER1L6Q2WGJ9 1857 aa12.13□□□□□ -0.47
PROM1-204ENST00000503884 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
PROM1-204ENST00000503884 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
PROM1-204ENST00000503884 TIAM2Q8IVF5 1701 aa12.13□□□□□ -0.47
PROM1-204ENST00000503884 A0A087WZG4 1122 aa12.12□□□□□ -0.47
PROM1-204ENST00000503884 STARD3NLO95772 234 aa12.12□□□□□ -0.47
PROM1-204ENST00000503884 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
PROM1-204ENST00000503884 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
PROM1-204ENST00000503884 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 ARFGEF2Q9Y6D5 1785 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
PROM1-204ENST00000503884 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
PROM1-204ENST00000503884 IL6STP40189 918 aaPredicted RBP12.11□□□□□ -0.47
PROM1-204ENST00000503884 RASSF7Q02833 373 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 TEFQ10587 303 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 FSTL1Q12841 308 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 TBC1D9BQ66K14 1250 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 PHACTR3Q96KR7 559 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 RSPH6AQ9H0K4 717 aa12.11□□□□□ -0.47
PROM1-204ENST00000503884 NFKBIEO00221 500 aa12.1□□□□□ -0.47
PROM1-204ENST00000503884 LMNB1P20700 586 aa12.1□□□□□ -0.47
PROM1-204ENST00000503884 C2CD5Q86YS7 1000 aa12.1□□□□□ -0.47
PROM1-204ENST00000503884 RRAGCQ9HB90 399 aa12.1□□□□□ -0.47
PROM1-204ENST00000503884 KCNQ3O43525 872 aa12.09□□□□□ -0.47
PROM1-204ENST00000503884 A1BGP04217 495 aa12.09□□□□□ -0.47
PROM1-204ENST00000503884 PRR5LQ6MZQ0 368 aa12.09□□□□□ -0.47
PROM1-204ENST00000503884 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
PROM1-204ENST00000503884 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
PROM1-204ENST00000503884 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 GLTPD2A6NH11 291 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 H0YIN7 160 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 PRKAR2BP31323 418 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 BRIP1Q9BX63 1249 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 SLX4Q8IY92 1834 aa12.08□□□□□ -0.48
PROM1-204ENST00000503884 BICDL1Q6ZP65 573 aa12.07□□□□□ -0.48
PROM1-204ENST00000503884 C16orf71Q8IYS4 520 aaPredicted RBP12.07□□□□□ -0.48
PROM1-204ENST00000503884 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
PROM1-204ENST00000503884 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
PROM1-204ENST00000503884 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms