RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TTLL6Q8N841 843 aa21.86■■□□□ 1.09
PDLIM7-210ENST00000503827 NFATC2IPQ8NCF5 419 aa21.86■■□□□ 1.09
PDLIM7-210ENST00000503827 DICER1Q9UPY3 1922 aaKnown RBP21.85■■□□□ 1.09
PDLIM7-210ENST00000503827 INTS5Q6P9B9 1019 aaKnown RBP21.85■■□□□ 1.09
PDLIM7-210ENST00000503827 CREBZFQ9NS37 354 aa21.84■■□□□ 1.09
PDLIM7-210ENST00000503827 POTECB2RU33 542 aa21.83■■□□□ 1.09
PDLIM7-210ENST00000503827 TNNT2P45379 298 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-210ENST00000503827 MKRN1Q9UHC7 482 aaKnown RBP21.83■■□□□ 1.09
PDLIM7-210ENST00000503827 SCN11AQ9UI33 1791 aa21.82■■□□□ 1.08
PDLIM7-210ENST00000503827 NFIXQ14938 502 aa21.82■■□□□ 1.08
PDLIM7-210ENST00000503827 NFKBIEO00221 500 aa21.81■■□□□ 1.08
PDLIM7-210ENST00000503827 C2CD5Q86YS7 1000 aa21.81■■□□□ 1.08
PDLIM7-210ENST00000503827 SOS1Q07889 1333 aaPredicted RBP21.8■■□□□ 1.08
PDLIM7-210ENST00000503827 H0YIN7 160 aa21.8■■□□□ 1.08
PDLIM7-210ENST00000503827 SERPINB2P05120 415 aa21.8■■□□□ 1.08
PDLIM7-210ENST00000503827 CHADLQ6NUI6 762 aa21.8■■□□□ 1.08
PDLIM7-210ENST00000503827 PRDM10Q9NQV6 1147 aa21.8■■□□□ 1.08
PDLIM7-210ENST00000503827 NARFQ9UHQ1 456 aa21.8■■□□□ 1.08
PDLIM7-210ENST00000503827 FOXN1O15353 648 aa21.79■■□□□ 1.08
PDLIM7-210ENST00000503827 DNAJC10Q8IXB1 793 aa21.79■■□□□ 1.08
PDLIM7-210ENST00000503827 SLC34A2O95436 690 aa21.78■■□□□ 1.08
PDLIM7-210ENST00000503827 FER1L6Q2WGJ9 1857 aa21.77■■□□□ 1.08
PDLIM7-210ENST00000503827 ERFEQ4G0M1 354 aa21.77■■□□□ 1.08
PDLIM7-210ENST00000503827 COL15A1P39059 1388 aa21.76■■□□□ 1.07
PDLIM7-210ENST00000503827 AIDAQ96BJ3 306 aa21.76■■□□□ 1.07
PDLIM7-210ENST00000503827 CYP19A1P11511 503 aaPredicted RBP21.75■■□□□ 1.07
PDLIM7-210ENST00000503827 CNTNAP1P78357 1384 aa21.74■■□□□ 1.07
PDLIM7-210ENST00000503827 VIRMAQ69YN4 1812 aaKnown RBP21.74■■□□□ 1.07
PDLIM7-210ENST00000503827 CTCFP49711 727 aaPredicted RBP21.74■■□□□ 1.07
PDLIM7-210ENST00000503827 ANKRD31Q8N7Z5 1873 aa21.73■■□□□ 1.07
PDLIM7-210ENST00000503827 AEBP1Q8IUX7 1158 aa21.73■■□□□ 1.07
PDLIM7-210ENST00000503827 ZNF622Q969S3 477 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM7-210ENST00000503827 BCL2L12Q9HB09 334 aa21.73■■□□□ 1.07
PDLIM7-210ENST00000503827 PDZRN3Q9UPQ7 1066 aa21.73■■□□□ 1.07
PDLIM7-210ENST00000503827 CARMIL3Q8ND23 1372 aa21.73■■□□□ 1.07
PDLIM7-210ENST00000503827 C21orf2O43822 256 aa21.72■■□□□ 1.07
PDLIM7-210ENST00000503827 POTEIP0CG38 1075 aa21.71■■□□□ 1.07
PDLIM7-210ENST00000503827 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
PDLIM7-210ENST00000503827 SLC52A2Q9HAB3 445 aa21.71■■□□□ 1.07
PDLIM7-210ENST00000503827 ZNF219Q9P2Y4 722 aaPredicted RBP21.71■■□□□ 1.07
PDLIM7-210ENST00000503827 ZBTB1Q9Y2K1 713 aa21.71■■□□□ 1.07
PDLIM7-210ENST00000503827 CACNA1SQ13698 1873 aa21.71■■□□□ 1.07
PDLIM7-210ENST00000503827 DDNO94850 711 aaPredicted RBP21.7■■□□□ 1.06
PDLIM7-210ENST00000503827 AKAP4Q5JQC9 854 aa21.7■■□□□ 1.06
PDLIM7-210ENST00000503827 SULT6B1Q6IMI4 303 aa21.7■■□□□ 1.06
PDLIM7-210ENST00000503827 BICDL1Q6ZP65 573 aa21.7■■□□□ 1.06
PDLIM7-210ENST00000503827 SCN4AP35499 1836 aa21.7■■□□□ 1.06
PDLIM7-210ENST00000503827 PDE6BP35913 854 aa21.69■■□□□ 1.06
PDLIM7-210ENST00000503827 TAOK3Q9H2K8 898 aa21.69■■□□□ 1.06
PDLIM7-210ENST00000503827 LTBP3Q9NS15 1303 aa21.69■■□□□ 1.06
PDLIM7-210ENST00000503827 COL11A2P13942 1736 aaPredicted RBP21.69■■□□□ 1.06
PDLIM7-210ENST00000503827 IQCA1LA6NCM1 817 aa21.68■■□□□ 1.06
PDLIM7-210ENST00000503827 SLC39A6Q13433 755 aa21.68■■□□□ 1.06
PDLIM7-210ENST00000503827 BRIP1Q9BX63 1249 aa21.68■■□□□ 1.06
PDLIM7-210ENST00000503827 PASKQ96RG2 1323 aa21.68■■□□□ 1.06
PDLIM7-210ENST00000503827 VEGFBP49765 207 aa21.67■■□□□ 1.06
PDLIM7-210ENST00000503827 LDHDQ86WU2 507 aa21.67■■□□□ 1.06
PDLIM7-210ENST00000503827 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
PDLIM7-210ENST00000503827 TMEM88BA6NKF7 163 aa21.66■■□□□ 1.06
PDLIM7-210ENST00000503827 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
PDLIM7-210ENST00000503827 LBX1P52954 281 aa21.66■■□□□ 1.06
PDLIM7-210ENST00000503827 LGR6Q9HBX8 967 aa21.66■■□□□ 1.06
PDLIM7-210ENST00000503827 MRC1P22897 1456 aa21.65■■□□□ 1.06
PDLIM7-210ENST00000503827 A0A087WZG4 1122 aa21.65■■□□□ 1.06
PDLIM7-210ENST00000503827 VSIG10Q8N0Z9 540 aa21.65■■□□□ 1.06
PDLIM7-210ENST00000503827 WBP1LQ9NX94 342 aa21.65■■□□□ 1.06
PDLIM7-210ENST00000503827 SLX4Q8IY92 1834 aa21.64■■□□□ 1.06
PDLIM7-210ENST00000503827 ARFGEF2Q9Y6D5 1785 aa21.64■■□□□ 1.06
PDLIM7-210ENST00000503827 RNMTO43148 476 aaKnown RBP21.63■■□□□ 1.05
PDLIM7-210ENST00000503827 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
PDLIM7-210ENST00000503827 SOGA3Q5TF21 947 aa21.63■■□□□ 1.05
PDLIM7-210ENST00000503827 TBC1D9BQ66K14 1250 aa21.63■■□□□ 1.05
PDLIM7-210ENST00000503827 CNKSR1Q969H4 720 aa21.63■■□□□ 1.05
PDLIM7-210ENST00000503827 TAF1DQ9H5J8 278 aaPredicted RBP21.63■■□□□ 1.05
PDLIM7-210ENST00000503827 UBR2Q8IWV8 1755 aa21.63■■□□□ 1.05
PDLIM7-210ENST00000503827 EIF5P55010 431 aaKnown RBP21.62■■□□□ 1.05
PDLIM7-210ENST00000503827 PRR5LQ6MZQ0 368 aa21.62■■□□□ 1.05
PDLIM7-210ENST00000503827 ABHD8Q96I13 439 aa21.62■■□□□ 1.05
PDLIM7-210ENST00000503827 SCN7AQ01118 1682 aa21.62■■□□□ 1.05
PDLIM7-210ENST00000503827 STARD3NLO95772 234 aa21.61■■□□□ 1.05
PDLIM7-210ENST00000503827 CCDC24Q8N4L8 307 aa21.61■■□□□ 1.05
PDLIM7-210ENST00000503827 L3MBTL3Q96JM7 780 aaPredicted RBP21.61■■□□□ 1.05
PDLIM7-210ENST00000503827 NPHP1O15259 732 aa21.6■■□□□ 1.05
PDLIM7-210ENST00000503827 ITGBL1O95965 494 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-210ENST00000503827 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
PDLIM7-210ENST00000503827 MORC1Q86VD1 984 aa21.6■■□□□ 1.05
PDLIM7-210ENST00000503827 IL13P35225 146 aa21.59■■□□□ 1.05
PDLIM7-210ENST00000503827 EAPPQ56P03 285 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-210ENST00000503827 PRPF40BQ6NWY9 871 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-210ENST00000503827 CLEC11AQ9Y240 323 aa21.59■■□□□ 1.05
PDLIM7-210ENST00000503827 HSPA8P11142 646 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-210ENST00000503827 DEFB115Q30KQ5 88 aa21.58■■□□□ 1.05
PDLIM7-210ENST00000503827 MAP2K1Q02750 393 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-210ENST00000503827 TTC5Q8N0Z6 440 aa21.57■■□□□ 1.04
PDLIM7-210ENST00000503827 CNBD1Q8NA66 436 aa21.57■■□□□ 1.04
PDLIM7-210ENST00000503827 MASTLQ96GX5 879 aa21.57■■□□□ 1.04
PDLIM7-210ENST00000503827 PANK3Q9H999 370 aa21.57■■□□□ 1.04
PDLIM7-210ENST00000503827 RASSF10A6NK89 507 aa21.56■■□□□ 1.04
PDLIM7-210ENST00000503827 SRGNP10124 158 aa21.56■■□□□ 1.04
PDLIM7-210ENST00000503827 ST5P78524 1137 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms