RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 SLC52A2Q9HAB3 445 aa17.75■□□□□ 0.43
TRIO-205ENST00000503399 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
TRIO-205ENST00000503399 KNSTRNQ9Y448 316 aa17.74■□□□□ 0.43
TRIO-205ENST00000503399 COL15A1P39059 1388 aa17.74■□□□□ 0.43
TRIO-205ENST00000503399 AFDNP55196 1824 aaKnown RBP17.73■□□□□ 0.43
TRIO-205ENST00000503399 NFIXQ14938 502 aa17.73■□□□□ 0.43
TRIO-205ENST00000503399 SMC1BQ8NDV3 1235 aa17.73■□□□□ 0.43
TRIO-205ENST00000503399 ZBTB1Q9Y2K1 713 aa17.73■□□□□ 0.43
TRIO-205ENST00000503399 HMOX1P09601 288 aa17.72■□□□□ 0.43
TRIO-205ENST00000503399 CYP19A1P11511 503 aaPredicted RBP17.72■□□□□ 0.43
TRIO-205ENST00000503399 NARFQ9UHQ1 456 aa17.72■□□□□ 0.43
TRIO-205ENST00000503399 MRC1P22897 1456 aa17.71■□□□□ 0.43
TRIO-205ENST00000503399 VIRMAQ69YN4 1812 aaKnown RBP17.71■□□□□ 0.43
TRIO-205ENST00000503399 RNMTO43148 476 aaKnown RBP17.71■□□□□ 0.43
TRIO-205ENST00000503399 SERPINB2P05120 415 aa17.7■□□□□ 0.42
TRIO-205ENST00000503399 LMNB1P20700 586 aa17.7■□□□□ 0.42
TRIO-205ENST00000503399 COL13A1Q5TAT6 717 aaPredicted RBP17.7■□□□□ 0.42
TRIO-205ENST00000503399 JMYQ8N9B5 988 aa17.7■□□□□ 0.42
TRIO-205ENST00000503399 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
TRIO-205ENST00000503399 ZC3H4Q9UPT8 1303 aaKnown RBP17.7■□□□□ 0.42
TRIO-205ENST00000503399 CAPN15O75808 1086 aa17.69■□□□□ 0.42
TRIO-205ENST00000503399 CANXP27824 592 aaKnown RBP17.69■□□□□ 0.42
TRIO-205ENST00000503399 BICDL1Q6ZP65 573 aa17.69■□□□□ 0.42
TRIO-205ENST00000503399 C2CD5Q86YS7 1000 aa17.69■□□□□ 0.42
TRIO-205ENST00000503399 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
TRIO-205ENST00000503399 TIAM2Q8IVF5 1701 aa17.69■□□□□ 0.42
TRIO-205ENST00000503399 NRXN2Q9P2S2 1712 aa17.69■□□□□ 0.42
TRIO-205ENST00000503399 DLEC1Q9Y238 1755 aa17.68■□□□□ 0.42
TRIO-205ENST00000503399 BCL2L12Q9HB09 334 aa17.68■□□□□ 0.42
TRIO-205ENST00000503399 CARMIL3Q8ND23 1372 aa17.67■□□□□ 0.42
TRIO-205ENST00000503399 GLTPD2A6NH11 291 aa17.67■□□□□ 0.42
TRIO-205ENST00000503399 H0YIN7 160 aa17.67■□□□□ 0.42
TRIO-205ENST00000503399 VEGFAP15692 232 aaPredicted RBP17.67■□□□□ 0.42
TRIO-205ENST00000503399 PRELPP51888 382 aa17.66■□□□□ 0.42
TRIO-205ENST00000503399 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
TRIO-205ENST00000503399 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
TRIO-205ENST00000503399 TTC5Q8N0Z6 440 aa17.65■□□□□ 0.42
TRIO-205ENST00000503399 VSIG10Q8N0Z9 540 aa17.65■□□□□ 0.42
TRIO-205ENST00000503399 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
TRIO-205ENST00000503399 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
TRIO-205ENST00000503399 NFKBIEO00221 500 aa17.64■□□□□ 0.41
TRIO-205ENST00000503399 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.41
TRIO-205ENST00000503399 TNS4Q8IZW8 715 aa17.64■□□□□ 0.41
TRIO-205ENST00000503399 ZNF622Q969S3 477 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRIO-205ENST00000503399 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
TRIO-205ENST00000503399 STARD3NLO95772 234 aa17.63■□□□□ 0.41
TRIO-205ENST00000503399 A0A087WZG4 1122 aa17.62■□□□□ 0.41
TRIO-205ENST00000503399 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
TRIO-205ENST00000503399 TBC1D9BQ66K14 1250 aa17.62■□□□□ 0.41
TRIO-205ENST00000503399 CCDC24Q8N4L8 307 aa17.62■□□□□ 0.41
TRIO-205ENST00000503399 PCNTO95613 3336 aa17.62■□□□□ 0.41
TRIO-205ENST00000503399 NPHP1O15259 732 aa17.61■□□□□ 0.41
TRIO-205ENST00000503399 HSPA1AP0DMV8 641 aaKnown RBP17.61■□□□□ 0.41
TRIO-205ENST00000503399 HSPA1BP0DMV9 641 aaKnown RBP17.61■□□□□ 0.41
TRIO-205ENST00000503399 EIF5P55010 431 aaKnown RBP17.61■□□□□ 0.41
TRIO-205ENST00000503399 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
TRIO-205ENST00000503399 DPY19L2Q6NUT2 758 aa17.61■□□□□ 0.41
TRIO-205ENST00000503399 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
TRIO-205ENST00000503399 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
TRIO-205ENST00000503399 C21orf2O43822 256 aa17.6■□□□□ 0.41
TRIO-205ENST00000503399 TEFQ10587 303 aa17.6■□□□□ 0.41
TRIO-205ENST00000503399 TBC1D2BQ9UPU7 963 aa17.6■□□□□ 0.41
TRIO-205ENST00000503399 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
TRIO-205ENST00000503399 PDE6BP35913 854 aa17.59■□□□□ 0.41
TRIO-205ENST00000503399 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
TRIO-205ENST00000503399 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
TRIO-205ENST00000503399 ZNF496Q96IT1 587 aaPredicted RBP17.59■□□□□ 0.41
TRIO-205ENST00000503399 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
TRIO-205ENST00000503399 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
TRIO-205ENST00000503399 PRR5LQ6MZQ0 368 aa17.58■□□□□ 0.4
TRIO-205ENST00000503399 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
TRIO-205ENST00000503399 BRIP1Q9BX63 1249 aa17.58■□□□□ 0.4
TRIO-205ENST00000503399 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
TRIO-205ENST00000503399 POTECB2RU33 542 aa17.57■□□□□ 0.4
TRIO-205ENST00000503399 ZNF790Q6PG37 636 aa17.57■□□□□ 0.4
TRIO-205ENST00000503399 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
TRIO-205ENST00000503399 CNBD1Q8NA66 436 aa17.56■□□□□ 0.4
TRIO-205ENST00000503399 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
TRIO-205ENST00000503399 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
TRIO-205ENST00000503399 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
TRIO-205ENST00000503399 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
TRIO-205ENST00000503399 DICER1Q9UPY3 1922 aaKnown RBP17.55■□□□□ 0.4
TRIO-205ENST00000503399 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
TRIO-205ENST00000503399 IL6STP40189 918 aaPredicted RBP17.55■□□□□ 0.4
TRIO-205ENST00000503399 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
TRIO-205ENST00000503399 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
TRIO-205ENST00000503399 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
TRIO-205ENST00000503399 SETDB2Q96T68 719 aa17.55■□□□□ 0.4
TRIO-205ENST00000503399 A1BGP04217 495 aa17.54■□□□□ 0.4
TRIO-205ENST00000503399 ST5P78524 1137 aa17.54■□□□□ 0.4
TRIO-205ENST00000503399 FMNL2Q96PY5 1086 aa17.54■□□□□ 0.4
TRIO-205ENST00000503399 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
TRIO-205ENST00000503399 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
TRIO-205ENST00000503399 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
TRIO-205ENST00000503399 MKRN1Q9UHC7 482 aaKnown RBP17.53■□□□□ 0.4
TRIO-205ENST00000503399 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
TRIO-205ENST00000503399 SLX4Q8IY92 1834 aa17.52■□□□□ 0.4
TRIO-205ENST00000503399 COL3A1P02461 1466 aaPredicted RBP17.52■□□□□ 0.4
TRIO-205ENST00000503399 CAMTA2O94983 1202 aa17.52■□□□□ 0.4
TRIO-205ENST00000503399 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms