RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 EIF2S2P20042 333 aaKnown RBP14.36□□□□□ -0.11
USP46-204ENST00000503060 BRINP3Q76B58 766 aa14.36□□□□□ -0.11
USP46-204ENST00000503060 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
USP46-204ENST00000503060 PHAXQ9H814 394 aaKnown RBP14.36□□□□□ -0.11
USP46-204ENST00000503060 RAD21O60216 631 aa14.35□□□□□ -0.11
USP46-204ENST00000503060 PLEKHM2Q8IWE5 1019 aa14.35□□□□□ -0.11
USP46-204ENST00000503060 C22orf23Q9BZE7 217 aa14.35□□□□□ -0.11
USP46-204ENST00000503060 SIPA1L3O60292 1781 aaPredicted RBP14.34□□□□□ -0.11
USP46-204ENST00000503060 CPDO75976 1380 aa14.34□□□□□ -0.11
USP46-204ENST00000503060 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
USP46-204ENST00000503060 BECN1Q14457 450 aa14.34□□□□□ -0.11
USP46-204ENST00000503060 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
USP46-204ENST00000503060 CHRNA2Q15822 529 aa14.34□□□□□ -0.11
USP46-204ENST00000503060 FAM177A1Q8N128 213 aaPredicted RBP14.34□□□□□ -0.11
USP46-204ENST00000503060 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
USP46-204ENST00000503060 CHPF2Q9P2E5 772 aa14.34□□□□□ -0.11
USP46-204ENST00000503060 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
USP46-204ENST00000503060 MEGF6O75095 1541 aa14.33□□□□□ -0.12
USP46-204ENST00000503060 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
USP46-204ENST00000503060 C16orf71Q8IYS4 520 aaPredicted RBP14.32□□□□□ -0.12
USP46-204ENST00000503060 RGS22Q8NE09 1264 aa14.32□□□□□ -0.12
USP46-204ENST00000503060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP46-204ENST00000503060 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.32□□□□□ -0.12
USP46-204ENST00000503060 SPG7Q9UQ90 795 aa14.32□□□□□ -0.12
USP46-204ENST00000503060 PLEKHG2Q9H7P9 1386 aa14.32□□□□□ -0.12
USP46-204ENST00000503060 GRIPAP1Q4V328 841 aa14.32□□□□□ -0.12
USP46-204ENST00000503060 KCTD17Q8N5Z5 321 aa14.32□□□□□ -0.12
USP46-204ENST00000503060 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
USP46-204ENST00000503060 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
USP46-204ENST00000503060 GIGYF1O75420 1035 aaPredicted RBP14.31□□□□□ -0.12
USP46-204ENST00000503060 PHKG2P15735 406 aa14.31□□□□□ -0.12
USP46-204ENST00000503060 USP44Q9H0E7 712 aa14.31□□□□□ -0.12
USP46-204ENST00000503060 GSPT1P15170 499 aaKnown RBP14.31□□□□□ -0.12
USP46-204ENST00000503060 ATP8B2P98198 1209 aa14.31□□□□□ -0.12
USP46-204ENST00000503060 SETQ01105 290 aaPredicted RBP14.31□□□□□ -0.12
USP46-204ENST00000503060 TTC22Q5TAA0 569 aa14.31□□□□□ -0.12
USP46-204ENST00000503060 SRCIN1Q9C0H9 1055 aa14.31□□□□□ -0.12
USP46-204ENST00000503060 SLAIN2Q9P270 581 aa14.31□□□□□ -0.12
USP46-204ENST00000503060 KDM6AO15550 1401 aaPredicted RBP14.31□□□□□ -0.12
USP46-204ENST00000503060 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
USP46-204ENST00000503060 APBB1O00213 710 aa14.3□□□□□ -0.12
USP46-204ENST00000503060 TBC1D9Q6ZT07 1266 aa14.3□□□□□ -0.12
USP46-204ENST00000503060 OTUD7AQ8TE49 926 aaPredicted RBP14.3□□□□□ -0.12
USP46-204ENST00000503060 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
USP46-204ENST00000503060 LRRFIP2Q9Y608 721 aaKnown RBP14.3□□□□□ -0.12
USP46-204ENST00000503060 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
USP46-204ENST00000503060 CDC45O75419 566 aa14.3□□□□□ -0.12
USP46-204ENST00000503060 ANXA1P04083 346 aa14.3□□□□□ -0.12
USP46-204ENST00000503060 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
USP46-204ENST00000503060 PTMSP20962 102 aa14.3□□□□□ -0.12
USP46-204ENST00000503060 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
USP46-204ENST00000503060 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
USP46-204ENST00000503060 RTL5Q5HYW3 569 aaPredicted RBP14.29□□□□□ -0.12
USP46-204ENST00000503060 IFNL2Q8IZJ0 200 aa14.29□□□□□ -0.12
USP46-204ENST00000503060 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
USP46-204ENST00000503060 PI4KAP2A4QPH2 592 aa14.29□□□□□ -0.12
USP46-204ENST00000503060 PI4KAP1Q8N8J0 262 aa14.29□□□□□ -0.12
USP46-204ENST00000503060 SLC52A2Q9HAB3 445 aa14.29□□□□□ -0.12
USP46-204ENST00000503060 RBM25P49756 843 aaKnown RBP14.28□□□□□ -0.12
USP46-204ENST00000503060 BEND3Q5T5X7 828 aa14.28□□□□□ -0.12
USP46-204ENST00000503060 TBC1D2Q9BYX2 928 aa14.28□□□□□ -0.12
USP46-204ENST00000503060 ADCY9O60503 1353 aa14.28□□□□□ -0.12
USP46-204ENST00000503060 PRAMEF22A3QJZ6 481 aa14.27□□□□□ -0.12
USP46-204ENST00000503060 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.12
USP46-204ENST00000503060 PKD1L3Q7Z443 1732 aa14.27□□□□□ -0.12
USP46-204ENST00000503060 MTMR7Q9Y216 660 aa14.27□□□□□ -0.13
USP46-204ENST00000503060 ADRA2BP18089 450 aa14.26□□□□□ -0.13
USP46-204ENST00000503060 PROSER3Q2NL68 480 aa14.26□□□□□ -0.13
USP46-204ENST00000503060 ZNF790Q6PG37 636 aa14.26□□□□□ -0.13
USP46-204ENST00000503060 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
USP46-204ENST00000503060 CYP27B1O15528 508 aa14.26□□□□□ -0.13
USP46-204ENST00000503060 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
USP46-204ENST00000503060 MRC1P22897 1456 aa14.26□□□□□ -0.13
USP46-204ENST00000503060 IBTKQ9P2D0 1353 aaPredicted RBP14.26□□□□□ -0.13
USP46-204ENST00000503060 SLC39A6Q13433 755 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 NFATC2IPQ8NCF5 419 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 DCAF5Q96JK2 942 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 SSH3Q8TE77 659 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 LRRCC1Q9C099 1032 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 OSBPL3Q9H4L5 887 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 WDR17Q8IZU2 1322 aa14.25□□□□□ -0.13
USP46-204ENST00000503060 HSP90AB1P08238 724 aaKnown RBP14.24□□□□□ -0.13
USP46-204ENST00000503060 KSR2Q6VAB6 950 aa14.24□□□□□ -0.13
USP46-204ENST00000503060 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
USP46-204ENST00000503060 NBPF7P0C2Y1 421 aaPredicted RBP14.24□□□□□ -0.13
USP46-204ENST00000503060 SDSP20132 328 aa14.24□□□□□ -0.13
USP46-204ENST00000503060 MCCP23508 829 aa14.24□□□□□ -0.13
USP46-204ENST00000503060 PDE1AP54750 535 aa14.24□□□□□ -0.13
USP46-204ENST00000503060 MAP3K2Q9Y2U5 619 aa14.24□□□□□ -0.13
USP46-204ENST00000503060 ALDH1L1O75891 902 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 POLA2Q14181 598 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 C5P01031 1676 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 PDIA6Q15084 440 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 NFKBIBQ15653 356 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 PPP1R42Q7Z4L9 355 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 ABCA3Q99758 1704 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 SALL3Q9BXA9 1300 aa14.23□□□□□ -0.13
USP46-204ENST00000503060 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
USP46-204ENST00000503060 TOM1L2Q6ZVM7 507 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms