RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 USPL1Q5W0Q7 1092 aa24.8■■□□□ 1.56
HERC6-204ENST00000502870 DPY19L2Q6NUT2 758 aa24.8■■□□□ 1.56
HERC6-204ENST00000502870 TTLL6Q8N841 843 aa24.8■■□□□ 1.56
HERC6-204ENST00000502870 SCN11AQ9UI33 1791 aa24.8■■□□□ 1.56
HERC6-204ENST00000502870 INTS5Q6P9B9 1019 aaKnown RBP24.79■■□□□ 1.56
HERC6-204ENST00000502870 DICER1Q9UPY3 1922 aaKnown RBP24.76■■□□□ 1.55
HERC6-204ENST00000502870 NARFQ9UHQ1 456 aa24.76■■□□□ 1.55
HERC6-204ENST00000502870 SOS1Q07889 1333 aaPredicted RBP24.76■■□□□ 1.55
HERC6-204ENST00000502870 H0YIN7 160 aa24.75■■□□□ 1.55
HERC6-204ENST00000502870 NFIXQ14938 502 aa24.75■■□□□ 1.55
HERC6-204ENST00000502870 CREBZFQ9NS37 354 aa24.75■■□□□ 1.55
HERC6-204ENST00000502870 C2CD5Q86YS7 1000 aa24.74■■□□□ 1.55
HERC6-204ENST00000502870 COL15A1P39059 1388 aa24.74■■□□□ 1.55
HERC6-204ENST00000502870 SERPINB2P05120 415 aa24.73■■□□□ 1.55
HERC6-204ENST00000502870 DNAJC10Q8IXB1 793 aa24.73■■□□□ 1.55
HERC6-204ENST00000502870 NFKBIEO00221 500 aa24.71■■□□□ 1.55
HERC6-204ENST00000502870 CHADLQ6NUI6 762 aa24.71■■□□□ 1.55
HERC6-204ENST00000502870 PDZRN3Q9UPQ7 1066 aa24.71■■□□□ 1.55
HERC6-204ENST00000502870 POTECB2RU33 542 aa24.69■■□□□ 1.54
HERC6-204ENST00000502870 ERFEQ4G0M1 354 aa24.69■■□□□ 1.54
HERC6-204ENST00000502870 AEBP1Q8IUX7 1158 aa24.69■■□□□ 1.54
HERC6-204ENST00000502870 MKRN1Q9UHC7 482 aaKnown RBP24.69■■□□□ 1.54
HERC6-204ENST00000502870 FER1L6Q2WGJ9 1857 aa24.68■■□□□ 1.54
HERC6-204ENST00000502870 CYP19A1P11511 503 aaPredicted RBP24.68■■□□□ 1.54
HERC6-204ENST00000502870 SLC52A2Q9HAB3 445 aa24.68■■□□□ 1.54
HERC6-204ENST00000502870 VIRMAQ69YN4 1812 aaKnown RBP24.68■■□□□ 1.54
HERC6-204ENST00000502870 AKAP4Q5JQC9 854 aa24.67■■□□□ 1.54
HERC6-204ENST00000502870 PRDM10Q9NQV6 1147 aa24.67■■□□□ 1.54
HERC6-204ENST00000502870 SULT6B1Q6IMI4 303 aa24.66■■□□□ 1.54
HERC6-204ENST00000502870 AIDAQ96BJ3 306 aa24.66■■□□□ 1.54
HERC6-204ENST00000502870 POLR3GLQ9BT43 218 aa24.66■■□□□ 1.54
HERC6-204ENST00000502870 MRC1P22897 1456 aa24.64■■□□□ 1.54
HERC6-204ENST00000502870 PDE6BP35913 854 aa24.64■■□□□ 1.54
HERC6-204ENST00000502870 ZBTB1Q9Y2K1 713 aa24.64■■□□□ 1.54
HERC6-204ENST00000502870 CNTNAP1P78357 1384 aa24.64■■□□□ 1.53
HERC6-204ENST00000502870 CARMIL3Q8ND23 1372 aa24.64■■□□□ 1.53
HERC6-204ENST00000502870 ANKRD31Q8N7Z5 1873 aa24.64■■□□□ 1.53
HERC6-204ENST00000502870 VSIG10Q8N0Z9 540 aa24.63■■□□□ 1.53
HERC6-204ENST00000502870 ZNF622Q969S3 477 aaKnown RBP eCLIP24.63■■□□□ 1.53
HERC6-204ENST00000502870 BCL2L12Q9HB09 334 aa24.63■■□□□ 1.53
HERC6-204ENST00000502870 LTBP3Q9NS15 1303 aa24.62■■□□□ 1.53
HERC6-204ENST00000502870 A0A087WZG4 1122 aa24.62■■□□□ 1.53
HERC6-204ENST00000502870 IQCA1LA6NCM1 817 aa24.62■■□□□ 1.53
HERC6-204ENST00000502870 FOXN1O15353 648 aa24.62■■□□□ 1.53
HERC6-204ENST00000502870 CTCFP49711 727 aaPredicted RBP24.62■■□□□ 1.53
HERC6-204ENST00000502870 TAOK3Q9H2K8 898 aa24.62■■□□□ 1.53
HERC6-204ENST00000502870 SCN4AP35499 1836 aa24.61■■□□□ 1.53
HERC6-204ENST00000502870 C21orf2O43822 256 aa24.61■■□□□ 1.53
HERC6-204ENST00000502870 BICDL1Q6ZP65 573 aa24.61■■□□□ 1.53
HERC6-204ENST00000502870 BRIP1Q9BX63 1249 aa24.61■■□□□ 1.53
HERC6-204ENST00000502870 COL11A2P13942 1736 aaPredicted RBP24.59■■□□□ 1.53
HERC6-204ENST00000502870 SLC39A6Q13433 755 aa24.59■■□□□ 1.53
HERC6-204ENST00000502870 SOGA3Q5TF21 947 aa24.59■■□□□ 1.53
HERC6-204ENST00000502870 MORC1Q86VD1 984 aa24.59■■□□□ 1.53
HERC6-204ENST00000502870 ZNF219Q9P2Y4 722 aaPredicted RBP24.59■■□□□ 1.53
HERC6-204ENST00000502870 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
HERC6-204ENST00000502870 STARD3NLO95772 234 aa24.58■■□□□ 1.53
HERC6-204ENST00000502870 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
HERC6-204ENST00000502870 LDHDQ86WU2 507 aa24.58■■□□□ 1.53
HERC6-204ENST00000502870 SCN7AQ01118 1682 aa24.58■■□□□ 1.53
HERC6-204ENST00000502870 CACNA1SQ13698 1873 aa24.58■■□□□ 1.52
HERC6-204ENST00000502870 RNMTO43148 476 aaKnown RBP24.57■■□□□ 1.52
HERC6-204ENST00000502870 CNKSR1Q969H4 720 aa24.57■■□□□ 1.52
HERC6-204ENST00000502870 LGR6Q9HBX8 967 aa24.57■■□□□ 1.52
HERC6-204ENST00000502870 ARFGEF2Q9Y6D5 1785 aa24.57■■□□□ 1.52
HERC6-204ENST00000502870 DDNO94850 711 aaPredicted RBP24.56■■□□□ 1.52
HERC6-204ENST00000502870 SLC34A2O95436 690 aa24.56■■□□□ 1.52
HERC6-204ENST00000502870 PASKQ96RG2 1323 aa24.56■■□□□ 1.52
HERC6-204ENST00000502870 NPHP1O15259 732 aa24.55■■□□□ 1.52
HERC6-204ENST00000502870 POTEIP0CG38 1075 aa24.55■■□□□ 1.52
HERC6-204ENST00000502870 POTEJP0CG39 1038 aa24.55■■□□□ 1.52
HERC6-204ENST00000502870 IL13P35225 146 aa24.55■■□□□ 1.52
HERC6-204ENST00000502870 EIF5P55010 431 aaKnown RBP24.55■■□□□ 1.52
HERC6-204ENST00000502870 TMEM88BA6NKF7 163 aa24.54■■□□□ 1.52
HERC6-204ENST00000502870 TTC5Q8N0Z6 440 aa24.54■■□□□ 1.52
HERC6-204ENST00000502870 PANK3Q9H999 370 aa24.54■■□□□ 1.52
HERC6-204ENST00000502870 TBC1D9BQ66K14 1250 aa24.53■■□□□ 1.52
HERC6-204ENST00000502870 PRR5LQ6MZQ0 368 aa24.53■■□□□ 1.52
HERC6-204ENST00000502870 NPM2Q86SE8 214 aaKnown RBP24.53■■□□□ 1.52
HERC6-204ENST00000502870 L3MBTL3Q96JM7 780 aaPredicted RBP24.53■■□□□ 1.52
HERC6-204ENST00000502870 SLX4Q8IY92 1834 aa24.52■■□□□ 1.52
HERC6-204ENST00000502870 VEGFBP49765 207 aa24.52■■□□□ 1.52
HERC6-204ENST00000502870 STYK1Q6J9G0 422 aa24.52■■□□□ 1.52
HERC6-204ENST00000502870 ST5P78524 1137 aa24.51■■□□□ 1.51
HERC6-204ENST00000502870 CNBD1Q8NA66 436 aa24.51■■□□□ 1.51
HERC6-204ENST00000502870 TEX13AQ9BXU3 409 aaPredicted RBP24.51■■□□□ 1.51
HERC6-204ENST00000502870 PRPF40BQ6NWY9 871 aaKnown RBP24.5■■□□□ 1.51
HERC6-204ENST00000502870 TAF1DQ9H5J8 278 aaPredicted RBP24.5■■□□□ 1.51
HERC6-204ENST00000502870 WBP1LQ9NX94 342 aa24.5■■□□□ 1.51
HERC6-204ENST00000502870 TIMELESSQ9UNS1 1208 aa24.5■■□□□ 1.51
HERC6-204ENST00000502870 LBX1P52954 281 aa24.49■■□□□ 1.51
HERC6-204ENST00000502870 SETDB2Q96T68 719 aa24.49■■□□□ 1.51
HERC6-204ENST00000502870 MASTLQ96GX5 879 aa24.48■■□□□ 1.51
HERC6-204ENST00000502870 ZNF330Q9Y3S2 320 aaPredicted RBP24.48■■□□□ 1.51
HERC6-204ENST00000502870 SRGNP10124 158 aa24.47■■□□□ 1.51
HERC6-204ENST00000502870 IL6STP40189 918 aaPredicted RBP24.46■■□□□ 1.51
HERC6-204ENST00000502870 EAPPQ56P03 285 aaPredicted RBP24.46■■□□□ 1.51
HERC6-204ENST00000502870 CCDC24Q8N4L8 307 aa24.46■■□□□ 1.51
HERC6-204ENST00000502870 TBC1D2BQ9UPU7 963 aa24.46■■□□□ 1.51
HERC6-204ENST00000502870 CLEC11AQ9Y240 323 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms