RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
LINC00955-201ENST00000502775 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
LINC00955-201ENST00000502775 NARFQ9UHQ1 456 aa17.35■□□□□ 0.37
LINC00955-201ENST00000502775 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
LINC00955-201ENST00000502775 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
LINC00955-201ENST00000502775 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
LINC00955-201ENST00000502775 NRXN2Q9P2S2 1712 aa17.34■□□□□ 0.37
LINC00955-201ENST00000502775 TNRC6CQ9HCJ0 1690 aaKnown RBP17.33■□□□□ 0.37
LINC00955-201ENST00000502775 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
LINC00955-201ENST00000502775 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
LINC00955-201ENST00000502775 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
LINC00955-201ENST00000502775 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
LINC00955-201ENST00000502775 RNF181Q9P0P0 153 aa17.33■□□□□ 0.36
LINC00955-201ENST00000502775 ZBTB1Q9Y2K1 713 aa17.33■□□□□ 0.36
LINC00955-201ENST00000502775 SBF1O95248 1867 aa17.33■□□□□ 0.36
LINC00955-201ENST00000502775 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.36
LINC00955-201ENST00000502775 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
LINC00955-201ENST00000502775 STARD3NLO95772 234 aa17.32■□□□□ 0.36
LINC00955-201ENST00000502775 CHRNA5P30532 468 aa17.32■□□□□ 0.36
LINC00955-201ENST00000502775 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
LINC00955-201ENST00000502775 ZC3H4Q9UPT8 1303 aaKnown RBP17.31■□□□□ 0.36
LINC00955-201ENST00000502775 A0A087WZG4 1122 aa17.31■□□□□ 0.36
LINC00955-201ENST00000502775 TEFQ10587 303 aa17.31■□□□□ 0.36
LINC00955-201ENST00000502775 NFIXQ14938 502 aa17.31■□□□□ 0.36
LINC00955-201ENST00000502775 TEX13AQ9BXU3 409 aaPredicted RBP17.3■□□□□ 0.36
LINC00955-201ENST00000502775 COL3A1P02461 1466 aaPredicted RBP17.3■□□□□ 0.36
LINC00955-201ENST00000502775 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
LINC00955-201ENST00000502775 SERPINB2P05120 415 aa17.29■□□□□ 0.36
LINC00955-201ENST00000502775 FSTL1Q12841 308 aa17.29■□□□□ 0.36
LINC00955-201ENST00000502775 WDR90Q96KV7 1748 aa17.29■□□□□ 0.36
LINC00955-201ENST00000502775 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
LINC00955-201ENST00000502775 GNAT3A8MTJ3 354 aa17.28■□□□□ 0.36
LINC00955-201ENST00000502775 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
LINC00955-201ENST00000502775 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
LINC00955-201ENST00000502775 CEP350Q5VT06 3117 aa17.27■□□□□ 0.36
LINC00955-201ENST00000502775 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
LINC00955-201ENST00000502775 TTLL6Q8N841 843 aa17.27■□□□□ 0.36
LINC00955-201ENST00000502775 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
LINC00955-201ENST00000502775 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.35
LINC00955-201ENST00000502775 H0YIN7 160 aa17.26■□□□□ 0.35
LINC00955-201ENST00000502775 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
LINC00955-201ENST00000502775 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
LINC00955-201ENST00000502775 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
LINC00955-201ENST00000502775 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
LINC00955-201ENST00000502775 LMNB1P20700 586 aa17.25■□□□□ 0.35
LINC00955-201ENST00000502775 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
LINC00955-201ENST00000502775 RASSF7Q02833 373 aa17.24■□□□□ 0.35
LINC00955-201ENST00000502775 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
LINC00955-201ENST00000502775 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
LINC00955-201ENST00000502775 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
LINC00955-201ENST00000502775 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
LINC00955-201ENST00000502775 IL6STP40189 918 aaPredicted RBP17.23■□□□□ 0.35
LINC00955-201ENST00000502775 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
LINC00955-201ENST00000502775 IL17REQ8NFR9 667 aa17.23■□□□□ 0.35
LINC00955-201ENST00000502775 RRAGCQ9HB90 399 aa17.23■□□□□ 0.35
LINC00955-201ENST00000502775 CARMIL3Q8ND23 1372 aa17.23■□□□□ 0.35
LINC00955-201ENST00000502775 PDE6BP35913 854 aa17.22■□□□□ 0.35
LINC00955-201ENST00000502775 SMC1BQ8NDV3 1235 aa17.22■□□□□ 0.35
LINC00955-201ENST00000502775 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
LINC00955-201ENST00000502775 ZNF330Q9Y3S2 320 aaPredicted RBP17.22■□□□□ 0.35
LINC00955-201ENST00000502775 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
LINC00955-201ENST00000502775 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
LINC00955-201ENST00000502775 CNGB1Q14028 1251 aaPredicted RBP17.21■□□□□ 0.35
LINC00955-201ENST00000502775 DNAJC5GQ8N7S2 189 aa17.21■□□□□ 0.35
LINC00955-201ENST00000502775 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
LINC00955-201ENST00000502775 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
LINC00955-201ENST00000502775 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
LINC00955-201ENST00000502775 NPHP1O15259 732 aa17.2■□□□□ 0.34
LINC00955-201ENST00000502775 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
LINC00955-201ENST00000502775 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
LINC00955-201ENST00000502775 VEGFAP15692 232 aaPredicted RBP17.19■□□□□ 0.34
LINC00955-201ENST00000502775 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
LINC00955-201ENST00000502775 ZNF622Q969S3 477 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC00955-201ENST00000502775 KLRG1Q96E93 195 aa17.19■□□□□ 0.34
LINC00955-201ENST00000502775 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
LINC00955-201ENST00000502775 ST5P78524 1137 aa17.18■□□□□ 0.34
LINC00955-201ENST00000502775 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
LINC00955-201ENST00000502775 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
LINC00955-201ENST00000502775 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
LINC00955-201ENST00000502775 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
LINC00955-201ENST00000502775 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
LINC00955-201ENST00000502775 TBC1D2BQ9UPU7 963 aa17.18■□□□□ 0.34
LINC00955-201ENST00000502775 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
LINC00955-201ENST00000502775 FER1L6Q2WGJ9 1857 aa17.18■□□□□ 0.34
LINC00955-201ENST00000502775 NFKBIEO00221 500 aa17.17■□□□□ 0.34
LINC00955-201ENST00000502775 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
LINC00955-201ENST00000502775 ARFGEF2Q9Y6D5 1785 aa17.17■□□□□ 0.34
LINC00955-201ENST00000502775 A1BGP04217 495 aa17.16■□□□□ 0.34
LINC00955-201ENST00000502775 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
LINC00955-201ENST00000502775 DZIP3Q86Y13 1208 aaKnown RBP17.16■□□□□ 0.34
LINC00955-201ENST00000502775 CNKSR1Q969H4 720 aa17.16■□□□□ 0.34
LINC00955-201ENST00000502775 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
LINC00955-201ENST00000502775 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
LINC00955-201ENST00000502775 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
LINC00955-201ENST00000502775 CACNA1SQ13698 1873 aa17.15■□□□□ 0.34
LINC00955-201ENST00000502775 LTBP3Q9NS15 1303 aa17.15■□□□□ 0.34
LINC00955-201ENST00000502775 C21orf2O43822 256 aa17.14■□□□□ 0.33
LINC00955-201ENST00000502775 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
LINC00955-201ENST00000502775 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00955-201ENST00000502775 STYK1Q6J9G0 422 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms