RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 KIAA1551Q9HCM1 1747 aa29.59■■■□□ 2.33
SDHA-202ENST00000502379 CANXP27824 592 aaKnown RBP29.59■■■□□ 2.33
SDHA-202ENST00000502379 NARFQ9UHQ1 456 aa29.59■■■□□ 2.33
SDHA-202ENST00000502379 KCNQ3O43525 872 aa29.58■■■□□ 2.33
SDHA-202ENST00000502379 STARD3NLO95772 234 aa29.58■■■□□ 2.33
SDHA-202ENST00000502379 COL15A1P39059 1388 aa29.58■■■□□ 2.33
SDHA-202ENST00000502379 N4BP2Q86UW6 1770 aaPredicted RBP29.57■■■□□ 2.32
SDHA-202ENST00000502379 HEG1Q9ULI3 1381 aa29.57■■■□□ 2.32
SDHA-202ENST00000502379 POLRMTO00411 1230 aaKnown RBP29.57■■■□□ 2.32
SDHA-202ENST00000502379 SIPA1L3O60292 1781 aaPredicted RBP29.57■■■□□ 2.32
SDHA-202ENST00000502379 BTBD11A6QL63 1104 aa29.56■■■□□ 2.32
SDHA-202ENST00000502379 MCM10Q7L590 875 aa29.56■■■□□ 2.32
SDHA-202ENST00000502379 BCS1LQ9Y276 419 aa29.56■■■□□ 2.32
SDHA-202ENST00000502379 KCNA3P22001 575 aa29.55■■■□□ 2.32
SDHA-202ENST00000502379 BCL2L12Q9HB09 334 aa29.55■■■□□ 2.32
SDHA-202ENST00000502379 EIF5P55010 431 aaKnown RBP29.54■■■□□ 2.32
SDHA-202ENST00000502379 FMNL2Q96PY5 1086 aa29.54■■■□□ 2.32
SDHA-202ENST00000502379 NFIXQ14938 502 aa29.53■■■□□ 2.32
SDHA-202ENST00000502379 RTF1Q92541 710 aaKnown RBP29.53■■■□□ 2.32
SDHA-202ENST00000502379 TEX13AQ9BXU3 409 aaPredicted RBP29.53■■■□□ 2.32
SDHA-202ENST00000502379 ATP10DQ9P241 1426 aa29.53■■■□□ 2.32
SDHA-202ENST00000502379 DCTN1Q14203 1278 aa29.52■■■□□ 2.32
SDHA-202ENST00000502379 C1QTNF8P60827 252 aa29.51■■■□□ 2.31
SDHA-202ENST00000502379 ADCY9O60503 1353 aa29.5■■■□□ 2.31
SDHA-202ENST00000502379 GIGYF1O75420 1035 aaPredicted RBP29.49■■■□□ 2.31
SDHA-202ENST00000502379 A1BGP04217 495 aa29.49■■■□□ 2.31
SDHA-202ENST00000502379 CHRNA5P30532 468 aa29.48■■■□□ 2.31
SDHA-202ENST00000502379 A0A087WZG4 1122 aa29.47■■■□□ 2.31
SDHA-202ENST00000502379 HTATSF1O43719 755 aaKnown RBP29.47■■■□□ 2.31
SDHA-202ENST00000502379 PIM2Q9P1W9 311 aa29.47■■■□□ 2.31
SDHA-202ENST00000502379 PRAMEF22A3QJZ6 481 aa29.46■■■□□ 2.31
SDHA-202ENST00000502379 ARHGAP27Q6ZUM4 889 aa29.46■■■□□ 2.31
SDHA-202ENST00000502379 TBC1D2BQ9UPU7 963 aa29.46■■■□□ 2.31
SDHA-202ENST00000502379 ZNF330Q9Y3S2 320 aaPredicted RBP29.46■■■□□ 2.31
SDHA-202ENST00000502379 SERPINB2P05120 415 aa29.45■■■□□ 2.31
SDHA-202ENST00000502379 IL6STP40189 918 aaPredicted RBP29.45■■■□□ 2.31
SDHA-202ENST00000502379 ZNF526Q8TF50 670 aaPredicted RBP29.45■■■□□ 2.31
SDHA-202ENST00000502379 PLEKHF1Q96S99 279 aa29.45■■■□□ 2.31
SDHA-202ENST00000502379 USP16Q9Y5T5 823 aa29.45■■■□□ 2.31
SDHA-202ENST00000502379 BICDL1Q6ZP65 573 aa29.44■■■□□ 2.3
SDHA-202ENST00000502379 DALRD3Q5D0E6 543 aaKnown RBP29.43■■■□□ 2.3
SDHA-202ENST00000502379 BRCA1P38398 1863 aaKnown RBP29.42■■■□□ 2.3
SDHA-202ENST00000502379 DDX10Q13206 875 aaKnown RBP29.42■■■□□ 2.3
SDHA-202ENST00000502379 GPBP1L1Q9HC44 474 aaPredicted RBP29.42■■■□□ 2.3
SDHA-202ENST00000502379 PIP4K2AP48426 406 aaPredicted RBP29.41■■■□□ 2.3
SDHA-202ENST00000502379 TBC1D9BQ66K14 1250 aa29.41■■■□□ 2.3
SDHA-202ENST00000502379 MIS18AQ9NYP9 233 aa29.41■■■□□ 2.3
SDHA-202ENST00000502379 SNRPA1P09661 255 aaKnown RBP29.4■■■□□ 2.3
SDHA-202ENST00000502379 TAF7Q15545 349 aaPredicted RBP29.4■■■□□ 2.3
SDHA-202ENST00000502379 AFDNP55196 1824 aaKnown RBP29.39■■■□□ 2.3
SDHA-202ENST00000502379 NEFMP07197 916 aa29.39■■■□□ 2.3
SDHA-202ENST00000502379 RALBP1Q15311 655 aa29.38■■■□□ 2.29
SDHA-202ENST00000502379 NRXN2Q9P2S2 1712 aa29.37■■■□□ 2.29
SDHA-202ENST00000502379 CAMTA2O94983 1202 aa29.37■■■□□ 2.29
SDHA-202ENST00000502379 NFE2L2Q16236 605 aa29.37■■■□□ 2.29
SDHA-202ENST00000502379 NPM2Q86SE8 214 aaKnown RBP29.36■■■□□ 2.29
SDHA-202ENST00000502379 CARMIL3Q8ND23 1372 aa29.36■■■□□ 2.29
SDHA-202ENST00000502379 SENP3-EIF4A1A0A087X0R7 540 aa29.35■■■□□ 2.29
SDHA-202ENST00000502379 THUMPD2Q9BTF0 503 aaKnown RBP29.35■■■□□ 2.29
SDHA-202ENST00000502379 DZIP3Q86Y13 1208 aaKnown RBP29.34■■■□□ 2.29
SDHA-202ENST00000502379 C2CD5Q86YS7 1000 aa29.33■■■□□ 2.29
SDHA-202ENST00000502379 ARFGEF1Q9Y6D6 1849 aa29.33■■■□□ 2.29
SDHA-202ENST00000502379 SCN7AQ01118 1682 aa29.32■■■□□ 2.28
SDHA-202ENST00000502379 NBPF26B4DH59 902 aa29.32■■■□□ 2.28
SDHA-202ENST00000502379 NBPF10Q6P3W6 841 aaKnown RBP29.32■■■□□ 2.28
SDHA-202ENST00000502379 CCDC24Q8N4L8 307 aa29.32■■■□□ 2.28
SDHA-202ENST00000502379 NBPF15Q8N660 670 aa29.32■■■□□ 2.28
SDHA-202ENST00000502379 PNNQ9H307 717 aaKnown RBP29.32■■■□□ 2.28
SDHA-202ENST00000502379 MAPK8IP3Q9UPT6 1336 aa29.31■■■□□ 2.28
SDHA-202ENST00000502379 C9orf131Q5VYM1 1079 aa29.31■■■□□ 2.28
SDHA-202ENST00000502379 DLG5Q8TDM6 1919 aa29.31■■■□□ 2.28
SDHA-202ENST00000502379 PRR5LQ6MZQ0 368 aa29.3■■■□□ 2.28
SDHA-202ENST00000502379 SETDB2Q96T68 719 aa29.3■■■□□ 2.28
SDHA-202ENST00000502379 H0YIN7 160 aa29.29■■■□□ 2.28
SDHA-202ENST00000502379 PNISRQ8TF01 805 aaKnown RBP29.29■■■□□ 2.28
SDHA-202ENST00000502379 TTLL6Q8N841 843 aa29.27■■■□□ 2.28
SDHA-202ENST00000502379 BRIP1Q9BX63 1249 aa29.27■■■□□ 2.28
SDHA-202ENST00000502379 KIF3CO14782 793 aa29.26■■■□□ 2.27
SDHA-202ENST00000502379 MYBBP1AQ9BQG0 1328 aaKnown RBP29.25■■■□□ 2.27
SDHA-202ENST00000502379 EIF4A1P60842 406 aaKnown RBP29.25■■■□□ 2.27
SDHA-202ENST00000502379 CLEC4GQ6UXB4 293 aa29.24■■■□□ 2.27
SDHA-202ENST00000502379 CNBD1Q8NA66 436 aa29.24■■■□□ 2.27
SDHA-202ENST00000502379 PDE6BP35913 854 aa29.23■■■□□ 2.27
SDHA-202ENST00000502379 RIPK4P57078 832 aa29.23■■■□□ 2.27
SDHA-202ENST00000502379 RNF181Q9P0P0 153 aa29.23■■■□□ 2.27
SDHA-202ENST00000502379 BCORQ6W2J9 1755 aa29.22■■■□□ 2.27
SDHA-202ENST00000502379 ZNF622Q969S3 477 aaKnown RBP eCLIP29.22■■■□□ 2.27
SDHA-202ENST00000502379 ANKRD31Q8N7Z5 1873 aa29.22■■■□□ 2.27
SDHA-202ENST00000502379 KDM3BQ7LBC6 1761 aa29.21■■■□□ 2.27
SDHA-202ENST00000502379 DLEC1Q9Y238 1755 aa29.21■■■□□ 2.27
SDHA-202ENST00000502379 RASSF7Q02833 373 aa29.21■■■□□ 2.27
SDHA-202ENST00000502379 NPHP1O15259 732 aa29.2■■■□□ 2.26
SDHA-202ENST00000502379 TMPOP42166 694 aaKnown RBP29.2■■■□□ 2.26
SDHA-202ENST00000502379 NMRK2Q9NPI5 230 aa29.2■■■□□ 2.26
SDHA-202ENST00000502379 PDZRN3Q9UPQ7 1066 aa29.2■■■□□ 2.26
SDHA-202ENST00000502379 ZNF652Q9Y2D9 606 aa29.2■■■□□ 2.26
SDHA-202ENST00000502379 PRELPP51888 382 aa29.19■■■□□ 2.26
SDHA-202ENST00000502379 HLFQ16534 295 aa29.19■■■□□ 2.26
SDHA-202ENST00000502379 NGEFQ8N5V2 710 aa29.19■■■□□ 2.26
SDHA-202ENST00000502379 CEP350Q5VT06 3117 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms