RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
AC055717.1-201ENST00000502221 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
AC055717.1-201ENST00000502221 NRKQ7Z2Y5 1582 aa13.34□□□□□ -0.27
AC055717.1-201ENST00000502221 ACEP12821 1306 aa13.33□□□□□ -0.28
AC055717.1-201ENST00000502221 FKBP5Q13451 457 aaPredicted RBP13.33□□□□□ -0.28
AC055717.1-201ENST00000502221 EPB41L2O43491 1005 aaKnown RBP13.32□□□□□ -0.28
AC055717.1-201ENST00000502221 BRD1O95696 1058 aa13.32□□□□□ -0.28
AC055717.1-201ENST00000502221 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
AC055717.1-201ENST00000502221 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
AC055717.1-201ENST00000502221 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
AC055717.1-201ENST00000502221 THSD7AQ9UPZ6 1657 aa13.32□□□□□ -0.28
AC055717.1-201ENST00000502221 MCCP23508 829 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 ANAPC15P60006 121 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 GNAI1P63096 354 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 CUL4AQ13619 759 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 ZDHHC9Q9Y397 364 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 KIAA0232Q92628 1395 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 GOLGA6L6A8MZA4 724 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 U2SURPO15042 1029 aaKnown RBP13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 ERC2O15083 957 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 ONECUT3O60422 494 aaPredicted RBP13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 FGD1P98174 961 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
AC055717.1-201ENST00000502221 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
AC055717.1-201ENST00000502221 DIAPH1O60610 1272 aaKnown RBP13.3□□□□□ -0.28
AC055717.1-201ENST00000502221 FAM193AP78312 1265 aa13.3□□□□□ -0.28
AC055717.1-201ENST00000502221 FAM98CQ17RN3 349 aaKnown RBP13.3□□□□□ -0.28
AC055717.1-201ENST00000502221 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
AC055717.1-201ENST00000502221 LMO7Q8WWI1 1683 aa13.3□□□□□ -0.28
AC055717.1-201ENST00000502221 VAMP4O75379 141 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 TMEM87AQ8NBN3 555 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 IL17RAQ96F46 866 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 ZC3H6P61129 1189 aaKnown RBP13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 USP25Q9UHP3 1055 aa13.29□□□□□ -0.28
AC055717.1-201ENST00000502221 AKAP12Q02952 1782 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 SIRT2Q8IXJ6 389 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 CD163L1Q9NR16 1453 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 SPATA31A5Q5VU36 1347 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 SPATA31A7Q8IWB4 1347 aa13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
AC055717.1-201ENST00000502221 GABPB1Q06547 395 aaPredicted RBP13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 KRT27Q7Z3Y8 459 aa13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 ANKRD7Q92527 254 aa13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 OGFRQ9NZT2 677 aa13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 ZHX1Q9UKY1 873 aaPredicted RBP13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 CAMTA1Q9Y6Y1 1673 aa13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 A0A1W2PP64 1363 aa13.27□□□□□ -0.28
AC055717.1-201ENST00000502221 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.29
AC055717.1-201ENST00000502221 SSH2Q76I76 1423 aa13.27□□□□□ -0.29
AC055717.1-201ENST00000502221 A0A0G2JS52 829 aa13.27□□□□□ -0.29
AC055717.1-201ENST00000502221 PKP1Q13835 747 aa13.27□□□□□ -0.29
AC055717.1-201ENST00000502221 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.29
AC055717.1-201ENST00000502221 OSBPL3Q9H4L5 887 aa13.27□□□□□ -0.29
AC055717.1-201ENST00000502221 CTIFO43310 598 aaKnown RBP13.26□□□□□ -0.29
AC055717.1-201ENST00000502221 ZGPATQ8N5A5 531 aaKnown RBP13.26□□□□□ -0.29
AC055717.1-201ENST00000502221 ATP6V1DQ9Y5K8 247 aa13.26□□□□□ -0.29
AC055717.1-201ENST00000502221 RGPD1P0DJD0 1748 aa13.26□□□□□ -0.29
AC055717.1-201ENST00000502221 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 TMX3Q96JJ7 454 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 PRDM10Q9NQV6 1147 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 AK9Q5TCS8 1911 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 SDSP20132 328 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 MX1P20591 662 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 CBX1P83916 185 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 CREBRFQ8IUR6 639 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
AC055717.1-201ENST00000502221 USP6P35125 1406 aa13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 KDM4AO75164 1064 aa13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 HMMRO75330 724 aa13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 ADCY5O95622 1261 aa13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 CPSF1Q10570 1443 aaKnown RBP13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 RTL1A6NKG5 1358 aa13.24□□□□□ -0.29
AC055717.1-201ENST00000502221 COL18A1P39060 1754 aa13.23□□□□□ -0.29
AC055717.1-201ENST00000502221 ZNF853P0CG23 659 aa13.23□□□□□ -0.29
AC055717.1-201ENST00000502221 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
AC055717.1-201ENST00000502221 SLIT3O75094 1523 aa13.23□□□□□ -0.29
AC055717.1-201ENST00000502221 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
AC055717.1-201ENST00000502221 NEK4P51957 841 aa13.22□□□□□ -0.29
AC055717.1-201ENST00000502221 UBE2HP62256 183 aa13.22□□□□□ -0.29
AC055717.1-201ENST00000502221 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms