RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 DDX21Q9NR30 783 aaKnown RBP eCLIP22.8■■□□□ 1.24
LINC00535-201ENST00000501400 KCPQ6ZWJ8 1503 aa22.8■■□□□ 1.24
LINC00535-201ENST00000501400 SRCIN1Q9C0H9 1055 aa22.8■■□□□ 1.24
LINC00535-201ENST00000501400 USP35Q9P2H5 1018 aa22.8■■□□□ 1.24
LINC00535-201ENST00000501400 TTC5Q8N0Z6 440 aa22.79■■□□□ 1.24
LINC00535-201ENST00000501400 HYPKQ9NX55 129 aa22.79■■□□□ 1.24
LINC00535-201ENST00000501400 ERVV-2B6SEH9 535 aa22.78■■□□□ 1.24
LINC00535-201ENST00000501400 FMNL2Q96PY5 1086 aa22.78■■□□□ 1.24
LINC00535-201ENST00000501400 LRRFIP2Q9Y608 721 aaKnown RBP22.78■■□□□ 1.24
LINC00535-201ENST00000501400 DDX54Q8TDD1 881 aaKnown RBP22.77■■□□□ 1.24
LINC00535-201ENST00000501400 TNS2Q63HR2 1409 aa22.77■■□□□ 1.24
LINC00535-201ENST00000501400 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
LINC00535-201ENST00000501400 LRP10Q7Z4F1 713 aa22.76■■□□□ 1.23
LINC00535-201ENST00000501400 HMMRO75330 724 aa22.76■■□□□ 1.23
LINC00535-201ENST00000501400 KSR2Q6VAB6 950 aa22.76■■□□□ 1.23
LINC00535-201ENST00000501400 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
LINC00535-201ENST00000501400 USP16Q9Y5T5 823 aa22.76■■□□□ 1.23
LINC00535-201ENST00000501400 PNMA6EA0A0J9YXQ4 647 aa22.75■■□□□ 1.23
LINC00535-201ENST00000501400 UBTFL1P0CB47 393 aaPredicted RBP22.75■■□□□ 1.23
LINC00535-201ENST00000501400 ITGB4P16144 1822 aa22.74■■□□□ 1.23
LINC00535-201ENST00000501400 NBPF7P0C2Y1 421 aaPredicted RBP22.73■■□□□ 1.23
LINC00535-201ENST00000501400 ATP8B2P98198 1209 aa22.73■■□□□ 1.23
LINC00535-201ENST00000501400 BMP2KLQ5H9B9 411 aa22.72■■□□□ 1.23
LINC00535-201ENST00000501400 ARFGEF2Q9Y6D5 1785 aa22.72■■□□□ 1.23
LINC00535-201ENST00000501400 LRP6O75581 1613 aa22.72■■□□□ 1.23
LINC00535-201ENST00000501400 TOM1O60784 492 aa22.71■■□□□ 1.23
LINC00535-201ENST00000501400 MYL6BP14649 208 aa22.71■■□□□ 1.23
LINC00535-201ENST00000501400 PIP4K2BP78356 416 aa22.71■■□□□ 1.23
LINC00535-201ENST00000501400 PLEKHM2Q8IWE5 1019 aa22.71■■□□□ 1.23
LINC00535-201ENST00000501400 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
LINC00535-201ENST00000501400 AIMP1Q12904 312 aaKnown RBP22.7■■□□□ 1.23
LINC00535-201ENST00000501400 SMARCA5O60264 1052 aaPredicted RBP22.7■■□□□ 1.22
LINC00535-201ENST00000501400 ALDH1L1O75891 902 aa22.7■■□□□ 1.22
LINC00535-201ENST00000501400 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
LINC00535-201ENST00000501400 C16orf71Q8IYS4 520 aaPredicted RBP22.7■■□□□ 1.22
LINC00535-201ENST00000501400 OTUD7AQ8TE49 926 aaPredicted RBP22.7■■□□□ 1.22
LINC00535-201ENST00000501400 DDX58O95786 925 aaKnown RBP22.69■■□□□ 1.22
LINC00535-201ENST00000501400 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
LINC00535-201ENST00000501400 XAGE3Q8WTP9 111 aa22.69■■□□□ 1.22
LINC00535-201ENST00000501400 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
LINC00535-201ENST00000501400 APBB1O00213 710 aa22.69■■□□□ 1.22
LINC00535-201ENST00000501400 CWF19L2Q2TBE0 894 aaKnown RBP22.69■■□□□ 1.22
LINC00535-201ENST00000501400 EXOC6BQ9Y2D4 811 aa22.69■■□□□ 1.22
LINC00535-201ENST00000501400 IBTKQ9P2D0 1353 aaPredicted RBP22.68■■□□□ 1.22
LINC00535-201ENST00000501400 SSH3Q8TE77 659 aa22.68■■□□□ 1.22
LINC00535-201ENST00000501400 GSPT1P15170 499 aaKnown RBP22.67■■□□□ 1.22
LINC00535-201ENST00000501400 COPS6Q7L5N1 327 aa22.67■■□□□ 1.22
LINC00535-201ENST00000501400 LINS1Q8NG48 757 aa22.67■■□□□ 1.22
LINC00535-201ENST00000501400 NUP188Q5SRE5 1749 aa22.67■■□□□ 1.22
LINC00535-201ENST00000501400 POLA2Q14181 598 aa22.67■■□□□ 1.22
LINC00535-201ENST00000501400 SLIT2O94813 1529 aa22.66■■□□□ 1.22
LINC00535-201ENST00000501400 AFDNP55196 1824 aaKnown RBP22.66■■□□□ 1.22
LINC00535-201ENST00000501400 IGKV5-2P06315 115 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 PPP1R42Q7Z4L9 355 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 TMOD3Q9NYL9 352 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 DOT1LQ8TEK3 1739 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 ERBB4Q15303 1308 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 TUBGCP6Q96RT7 1819 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 NBPF26B4DH59 902 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 NBPF14Q5TI25 921 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 NBPF10Q6P3W6 841 aaKnown RBP22.65■■□□□ 1.22
LINC00535-201ENST00000501400 NBPF15Q8N660 670 aa22.65■■□□□ 1.22
LINC00535-201ENST00000501400 UTYO14607 1347 aa22.64■■□□□ 1.22
LINC00535-201ENST00000501400 SPATA31A1Q5TZJ5 1347 aa22.64■■□□□ 1.22
LINC00535-201ENST00000501400 RIC3Q7Z5B4 369 aa22.64■■□□□ 1.21
LINC00535-201ENST00000501400 TBC1D32Q96NH3 1257 aa22.64■■□□□ 1.21
LINC00535-201ENST00000501400 ZBTB47Q9UFB7 747 aaPredicted RBP22.64■■□□□ 1.21
LINC00535-201ENST00000501400 PTCD1O75127 700 aaKnown RBP22.63■■□□□ 1.21
LINC00535-201ENST00000501400 TTC22Q5TAA0 569 aa22.63■■□□□ 1.21
LINC00535-201ENST00000501400 DDRGK1Q96HY6 314 aa22.63■■□□□ 1.21
LINC00535-201ENST00000501400 SALL3Q9BXA9 1300 aa22.63■■□□□ 1.21
LINC00535-201ENST00000501400 NUTM2BA6NNL0 878 aaPredicted RBP22.63■■□□□ 1.21
LINC00535-201ENST00000501400 NUTM2EB1AL46 878 aaPredicted RBP22.63■■□□□ 1.21
LINC00535-201ENST00000501400 MTX1Q13505 466 aa22.63■■□□□ 1.21
LINC00535-201ENST00000501400 NUTM2AQ8IVF1 878 aaPredicted RBP22.63■■□□□ 1.21
LINC00535-201ENST00000501400 PIGBQ92521 554 aa22.63■■□□□ 1.21
LINC00535-201ENST00000501400 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.62■■□□□ 1.21
LINC00535-201ENST00000501400 UBAP1LF5GYI3 381 aa22.62■■□□□ 1.21
LINC00535-201ENST00000501400 METTL22Q9BUU2 404 aaPredicted RBP22.62■■□□□ 1.21
LINC00535-201ENST00000501400 BCL11AQ9H165 835 aa22.62■■□□□ 1.21
LINC00535-201ENST00000501400 C9orf78Q9NZ63 289 aaPredicted RBP22.62■■□□□ 1.21
LINC00535-201ENST00000501400 BCL9O00512 1426 aa22.61■■□□□ 1.21
LINC00535-201ENST00000501400 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
LINC00535-201ENST00000501400 GRM8O00222 908 aa22.61■■□□□ 1.21
LINC00535-201ENST00000501400 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
LINC00535-201ENST00000501400 SRGAP3O43295 1099 aa22.61■■□□□ 1.21
LINC00535-201ENST00000501400 ANKRD13DQ6ZTN6 518 aa22.61■■□□□ 1.21
LINC00535-201ENST00000501400 KAZALD1Q96I82 304 aa22.6■■□□□ 1.21
LINC00535-201ENST00000501400 UPF2Q9HAU5 1272 aaKnown RBP22.6■■□□□ 1.21
LINC00535-201ENST00000501400 ASAP1Q9ULH1 1129 aa22.6■■□□□ 1.21
LINC00535-201ENST00000501400 MFAP1P55081 439 aaKnown RBP22.59■■□□□ 1.21
LINC00535-201ENST00000501400 MYD88Q99836 296 aa22.59■■□□□ 1.21
LINC00535-201ENST00000501400 EXOC5O00471 708 aa22.59■■□□□ 1.21
LINC00535-201ENST00000501400 A1BGP04217 495 aa22.59■■□□□ 1.21
LINC00535-201ENST00000501400 SUCLG2Q96I99 432 aa22.59■■□□□ 1.21
LINC00535-201ENST00000501400 ATG3Q9NT62 314 aa22.59■■□□□ 1.21
LINC00535-201ENST00000501400 THRAP3Q9Y2W1 955 aaKnown RBP22.59■■□□□ 1.21
LINC00535-201ENST00000501400 SPATA31A5Q5VU36 1347 aa22.58■■□□□ 1.21
LINC00535-201ENST00000501400 SPATA31A7Q8IWB4 1347 aa22.58■■□□□ 1.21
LINC00535-201ENST00000501400 NEXNQ0ZGT2 675 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms