RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ZPR1O75312 459 aa21.41■■□□□ 1.02
NR1H3-227ENST00000498548 STARD3NLO95772 234 aa21.4■■□□□ 1.02
NR1H3-227ENST00000498548 NEFMP07197 916 aa21.4■■□□□ 1.02
NR1H3-227ENST00000498548 FMNL2Q96PY5 1086 aa21.4■■□□□ 1.02
NR1H3-227ENST00000498548 N4BP2Q86UW6 1770 aaPredicted RBP21.4■■□□□ 1.02
NR1H3-227ENST00000498548 COL15A1P39059 1388 aa21.39■■□□□ 1.02
NR1H3-227ENST00000498548 GRIN3BO60391 1043 aa21.39■■□□□ 1.01
NR1H3-227ENST00000498548 DDR1Q08345 913 aa21.39■■□□□ 1.01
NR1H3-227ENST00000498548 MIS18AQ9NYP9 233 aa21.39■■□□□ 1.01
NR1H3-227ENST00000498548 A0A0G2JLW4 131 aa21.38■■□□□ 1.01
NR1H3-227ENST00000498548 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
NR1H3-227ENST00000498548 HTATSF1O43719 755 aaKnown RBP21.38■■□□□ 1.01
NR1H3-227ENST00000498548 A1BGP04217 495 aa21.38■■□□□ 1.01
NR1H3-227ENST00000498548 KIF13BQ9NQT8 1826 aa21.38■■□□□ 1.01
NR1H3-227ENST00000498548 TM4SF1P30408 202 aa21.37■■□□□ 1.01
NR1H3-227ENST00000498548 ZNF784Q8NCA9 323 aaPredicted RBP21.37■■□□□ 1.01
NR1H3-227ENST00000498548 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
NR1H3-227ENST00000498548 NARFQ9UHQ1 456 aa21.37■■□□□ 1.01
NR1H3-227ENST00000498548 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
NR1H3-227ENST00000498548 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
NR1H3-227ENST00000498548 MYBBP1AQ9BQG0 1328 aaKnown RBP21.36■■□□□ 1.01
NR1H3-227ENST00000498548 EIF5P55010 431 aaKnown RBP21.36■■□□□ 1.01
NR1H3-227ENST00000498548 BCL2L12Q9HB09 334 aa21.36■■□□□ 1.01
NR1H3-227ENST00000498548 KIAA1551Q9HCM1 1747 aa21.35■■□□□ 1.01
NR1H3-227ENST00000498548 PIP4K2AP48426 406 aaPredicted RBP21.35■■□□□ 1.01
NR1H3-227ENST00000498548 TAF7Q15545 349 aaPredicted RBP21.35■■□□□ 1.01
NR1H3-227ENST00000498548 NFE2L2Q16236 605 aa21.35■■□□□ 1.01
NR1H3-227ENST00000498548 THUMPD2Q9BTF0 503 aaKnown RBP21.35■■□□□ 1.01
NR1H3-227ENST00000498548 C10orf71Q711Q0 1435 aa21.35■■□□□ 1.01
NR1H3-227ENST00000498548 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
NR1H3-227ENST00000498548 GOLGB1Q14789 3259 aaKnown RBP21.34■■□□□ 1.01
NR1H3-227ENST00000498548 POLRMTO00411 1230 aaKnown RBP21.34■■□□□ 1.01
NR1H3-227ENST00000498548 DPEP1P16444 411 aa21.34■■□□□ 1.01
NR1H3-227ENST00000498548 TGFB2P61812 414 aa21.34■■□□□ 1.01
NR1H3-227ENST00000498548 MAPK8IP3Q9UPT6 1336 aa21.33■■□□□ 1.01
NR1H3-227ENST00000498548 NFIXQ14938 502 aa21.33■■□□□ 1.01
NR1H3-227ENST00000498548 PNNQ9H307 717 aaKnown RBP21.33■■□□□ 1.01
NR1H3-227ENST00000498548 TBC1D2BQ9UPU7 963 aa21.33■■□□□ 1.01
NR1H3-227ENST00000498548 BICDL1Q6ZP65 573 aa21.32■■□□□ 1
NR1H3-227ENST00000498548 A0A087WZG4 1122 aa21.31■■□□□ 1
NR1H3-227ENST00000498548 BCS1LQ9Y276 419 aa21.31■■□□□ 1
NR1H3-227ENST00000498548 AFDNP55196 1824 aaKnown RBP21.31■■□□□ 1
NR1H3-227ENST00000498548 SNRPA1P09661 255 aaKnown RBP21.3■■□□□ 1
NR1H3-227ENST00000498548 IL6STP40189 918 aaPredicted RBP21.3■■□□□ 1
NR1H3-227ENST00000498548 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
NR1H3-227ENST00000498548 KCNA3P22001 575 aa21.29■■□□□ 1
NR1H3-227ENST00000498548 ZEB1P37275 1124 aaPredicted RBP21.29■■□□□ 1
NR1H3-227ENST00000498548 PRKRIP1Q9H875 184 aaPredicted RBP21.29■■□□□ 1
NR1H3-227ENST00000498548 SERPINB2P05120 415 aa21.28■■□□□ 1
NR1H3-227ENST00000498548 CHRNA5P30532 468 aa21.28■■□□□ 1
NR1H3-227ENST00000498548 RIPK4P57078 832 aa21.28■■□□□ 1
NR1H3-227ENST00000498548 TBC1D9BQ66K14 1250 aa21.28■■□□□ 1
NR1H3-227ENST00000498548 RRP7AQ9Y3A4 280 aaKnown RBP21.28■■□□□ 1
NR1H3-227ENST00000498548 TMPOP42166 694 aaKnown RBP21.26■□□□□ 0.99
NR1H3-227ENST00000498548 NEUROD2Q15784 382 aa21.26■□□□□ 0.99
NR1H3-227ENST00000498548 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
NR1H3-227ENST00000498548 BRCA1P38398 1863 aaKnown RBP21.26■□□□□ 0.99
NR1H3-227ENST00000498548 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
NR1H3-227ENST00000498548 NBPF26B4DH59 902 aa21.25■□□□□ 0.99
NR1H3-227ENST00000498548 WDR43Q15061 677 aaKnown RBP eCLIP21.25■□□□□ 0.99
NR1H3-227ENST00000498548 NBPF10Q6P3W6 841 aaKnown RBP21.25■□□□□ 0.99
NR1H3-227ENST00000498548 DZIP3Q86Y13 1208 aaKnown RBP21.25■□□□□ 0.99
NR1H3-227ENST00000498548 NBPF15Q8N660 670 aa21.25■□□□□ 0.99
NR1H3-227ENST00000498548 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
NR1H3-227ENST00000498548 CAMTA2O94983 1202 aa21.24■□□□□ 0.99
NR1H3-227ENST00000498548 CCDC24Q8N4L8 307 aa21.24■□□□□ 0.99
NR1H3-227ENST00000498548 PIM2Q9P1W9 311 aa21.24■□□□□ 0.99
NR1H3-227ENST00000498548 ADAMTS8Q9UP79 889 aa21.24■□□□□ 0.99
NR1H3-227ENST00000498548 NRXN2Q9P2S2 1712 aa21.24■□□□□ 0.99
NR1H3-227ENST00000498548 EIF4A1P60842 406 aaKnown RBP21.23■□□□□ 0.99
NR1H3-227ENST00000498548 ARHGAP27Q6ZUM4 889 aa21.23■□□□□ 0.99
NR1H3-227ENST00000498548 SCN7AQ01118 1682 aa21.23■□□□□ 0.99
NR1H3-227ENST00000498548 NGEFQ8N5V2 710 aa21.22■□□□□ 0.99
NR1H3-227ENST00000498548 GIGYF1O75420 1035 aaPredicted RBP21.21■□□□□ 0.99
NR1H3-227ENST00000498548 CARMIL3Q8ND23 1372 aa21.21■□□□□ 0.99
NR1H3-227ENST00000498548 DALRD3Q5D0E6 543 aaKnown RBP21.2■□□□□ 0.98
NR1H3-227ENST00000498548 RUNDC1Q96C34 613 aa21.2■□□□□ 0.98
NR1H3-227ENST00000498548 TSPYL4Q9UJ04 414 aa21.2■□□□□ 0.98
NR1H3-227ENST00000498548 BCORQ6W2J9 1755 aa21.2■□□□□ 0.98
NR1H3-227ENST00000498548 LAMB4A4D0S4 1761 aa21.19■□□□□ 0.98
NR1H3-227ENST00000498548 ZNF526Q8TF50 670 aaPredicted RBP21.19■□□□□ 0.98
NR1H3-227ENST00000498548 SETDB2Q96T68 719 aa21.19■□□□□ 0.98
NR1H3-227ENST00000498548 C2CD5Q86YS7 1000 aa21.18■□□□□ 0.98
NR1H3-227ENST00000498548 ATP10DQ9P241 1426 aa21.18■□□□□ 0.98
NR1H3-227ENST00000498548 ARFGEF1Q9Y6D6 1849 aa21.18■□□□□ 0.98
NR1H3-227ENST00000498548 PRR5LQ6MZQ0 368 aa21.17■□□□□ 0.98
NR1H3-227ENST00000498548 ANKRD31Q8N7Z5 1873 aa21.16■□□□□ 0.98
NR1H3-227ENST00000498548 MYL6BP14649 208 aa21.16■□□□□ 0.98
NR1H3-227ENST00000498548 LMOD3Q0VAK6 560 aa21.16■□□□□ 0.98
NR1H3-227ENST00000498548 HLFQ16534 295 aa21.16■□□□□ 0.98
NR1H3-227ENST00000498548 TRIM35Q9UPQ4 493 aa21.16■□□□□ 0.98
NR1H3-227ENST00000498548 LAS1LQ9Y4W2 734 aaKnown RBP21.16■□□□□ 0.98
NR1H3-227ENST00000498548 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
NR1H3-227ENST00000498548 CCDC184Q52MB2 194 aa21.15■□□□□ 0.98
NR1H3-227ENST00000498548 ADCY9O60503 1353 aa21.14■□□□□ 0.98
NR1H3-227ENST00000498548 FAM177BA6PVY3 158 aa21.14■□□□□ 0.97
NR1H3-227ENST00000498548 H0YIN7 160 aa21.14■□□□□ 0.97
NR1H3-227ENST00000498548 NPHP1O15259 732 aa21.14■□□□□ 0.97
NR1H3-227ENST00000498548 EIF2S2P20042 333 aaKnown RBP21.14■□□□□ 0.97
NR1H3-227ENST00000498548 CLEC4GQ6UXB4 293 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms