RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 DALRD3Q5D0E6 543 aaKnown RBP16.25■□□□□ 0.19
CNOT4-211ENST00000498534 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
CNOT4-211ENST00000498534 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
CNOT4-211ENST00000498534 KCNA3P22001 575 aa16.24■□□□□ 0.19
CNOT4-211ENST00000498534 TM4SF1P30408 202 aa16.24■□□□□ 0.19
CNOT4-211ENST00000498534 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
CNOT4-211ENST00000498534 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
CNOT4-211ENST00000498534 KIF3CO14782 793 aa16.23■□□□□ 0.19
CNOT4-211ENST00000498534 DDR1Q08345 913 aa16.23■□□□□ 0.19
CNOT4-211ENST00000498534 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
CNOT4-211ENST00000498534 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
CNOT4-211ENST00000498534 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
CNOT4-211ENST00000498534 POLRMTO00411 1230 aaKnown RBP16.21■□□□□ 0.19
CNOT4-211ENST00000498534 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
CNOT4-211ENST00000498534 TOMM70O94826 608 aa16.21■□□□□ 0.19
CNOT4-211ENST00000498534 STARD3NLO95772 234 aa16.21■□□□□ 0.19
CNOT4-211ENST00000498534 CNGB1Q14028 1251 aaPredicted RBP16.21■□□□□ 0.19
CNOT4-211ENST00000498534 C9orf131Q5VYM1 1079 aa16.21■□□□□ 0.19
CNOT4-211ENST00000498534 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
CNOT4-211ENST00000498534 NARFQ9UHQ1 456 aa16.21■□□□□ 0.19
CNOT4-211ENST00000498534 KIAA1551Q9HCM1 1747 aa16.2■□□□□ 0.18
CNOT4-211ENST00000498534 CHRNA5P30532 468 aa16.2■□□□□ 0.18
CNOT4-211ENST00000498534 TJP1Q07157 1748 aa16.19■□□□□ 0.18
CNOT4-211ENST00000498534 TEFQ10587 303 aa16.19■□□□□ 0.18
CNOT4-211ENST00000498534 A0A087WZG4 1122 aa16.18■□□□□ 0.18
CNOT4-211ENST00000498534 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
CNOT4-211ENST00000498534 ABCB7O75027 752 aa16.18■□□□□ 0.18
CNOT4-211ENST00000498534 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
CNOT4-211ENST00000498534 NFIXQ14938 502 aa16.18■□□□□ 0.18
CNOT4-211ENST00000498534 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
CNOT4-211ENST00000498534 GAS2L2Q8NHY3 880 aa16.18■□□□□ 0.18
CNOT4-211ENST00000498534 TEX13AQ9BXU3 409 aaPredicted RBP16.18■□□□□ 0.18
CNOT4-211ENST00000498534 ZBTB1Q9Y2K1 713 aa16.18■□□□□ 0.18
CNOT4-211ENST00000498534 SERPINB2P05120 415 aa16.17■□□□□ 0.18
CNOT4-211ENST00000498534 APLP1P51693 650 aa16.17■□□□□ 0.18
CNOT4-211ENST00000498534 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
CNOT4-211ENST00000498534 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
CNOT4-211ENST00000498534 COL15A1P39059 1388 aa16.16■□□□□ 0.18
CNOT4-211ENST00000498534 NPC1L1Q9UHC9 1359 aa16.16■□□□□ 0.18
CNOT4-211ENST00000498534 RNF181Q9P0P0 153 aa16.16■□□□□ 0.18
CNOT4-211ENST00000498534 BRCA1P38398 1863 aaKnown RBP16.16■□□□□ 0.18
CNOT4-211ENST00000498534 MRC1P22897 1456 aa16.16■□□□□ 0.18
CNOT4-211ENST00000498534 ARFGEF1Q9Y6D6 1849 aa16.15■□□□□ 0.18
CNOT4-211ENST00000498534 ZNF790Q6PG37 636 aa16.15■□□□□ 0.18
CNOT4-211ENST00000498534 NPM2Q86SE8 214 aaKnown RBP16.15■□□□□ 0.18
CNOT4-211ENST00000498534 IL17REQ8NFR9 667 aa16.15■□□□□ 0.18
CNOT4-211ENST00000498534 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
CNOT4-211ENST00000498534 H0YIN7 160 aa16.14■□□□□ 0.17
CNOT4-211ENST00000498534 EIF5P55010 431 aaKnown RBP16.14■□□□□ 0.17
CNOT4-211ENST00000498534 ZNF496Q96IT1 587 aaPredicted RBP16.14■□□□□ 0.17
CNOT4-211ENST00000498534 BCL2L12Q9HB09 334 aa16.14■□□□□ 0.17
CNOT4-211ENST00000498534 KCPQ6ZWJ8 1503 aa16.14■□□□□ 0.17
CNOT4-211ENST00000498534 VIRMAQ69YN4 1812 aaKnown RBP16.13■□□□□ 0.17
CNOT4-211ENST00000498534 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
CNOT4-211ENST00000498534 C2CD5Q86YS7 1000 aa16.13■□□□□ 0.17
CNOT4-211ENST00000498534 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
CNOT4-211ENST00000498534 RBM46Q8TBY0 533 aaKnown RBP16.13■□□□□ 0.17
CNOT4-211ENST00000498534 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
CNOT4-211ENST00000498534 ADAMTS7Q9UKP4 1686 aa16.12■□□□□ 0.17
CNOT4-211ENST00000498534 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
CNOT4-211ENST00000498534 FMNL2Q96PY5 1086 aa16.12■□□□□ 0.17
CNOT4-211ENST00000498534 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
CNOT4-211ENST00000498534 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
CNOT4-211ENST00000498534 PDZRN3Q9UPQ7 1066 aa16.11■□□□□ 0.17
CNOT4-211ENST00000498534 HEG1Q9ULI3 1381 aa16.11■□□□□ 0.17
CNOT4-211ENST00000498534 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
CNOT4-211ENST00000498534 LMNB1P20700 586 aa16.1■□□□□ 0.17
CNOT4-211ENST00000498534 PDE6BP35913 854 aa16.1■□□□□ 0.17
CNOT4-211ENST00000498534 IL6STP40189 918 aaPredicted RBP16.1■□□□□ 0.17
CNOT4-211ENST00000498534 FSTL1Q12841 308 aa16.1■□□□□ 0.17
CNOT4-211ENST00000498534 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
CNOT4-211ENST00000498534 PRKAR2BP31323 418 aa16.09■□□□□ 0.17
CNOT4-211ENST00000498534 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
CNOT4-211ENST00000498534 PHACTR3Q96KR7 559 aa16.09■□□□□ 0.17
CNOT4-211ENST00000498534 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.17
CNOT4-211ENST00000498534 NPHP1O15259 732 aa16.08■□□□□ 0.16
CNOT4-211ENST00000498534 A1BGP04217 495 aa16.08■□□□□ 0.16
CNOT4-211ENST00000498534 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
CNOT4-211ENST00000498534 DNAJC5GQ8N7S2 189 aa16.08■□□□□ 0.16
CNOT4-211ENST00000498534 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.161e-8■□□□□ 8.5
CNOT4-211ENST00000498534 SETDB2Q96T68 719 aa16.08■□□□□ 0.16
CNOT4-211ENST00000498534 BRIP1Q9BX63 1249 aa16.08■□□□□ 0.16
CNOT4-211ENST00000498534 ZC3H4Q9UPT8 1303 aaKnown RBP16.08■□□□□ 0.16
CNOT4-211ENST00000498534 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.16
CNOT4-211ENST00000498534 U2AF1L5P0DN76 240 aaPredicted RBP16.07■□□□□ 0.16
CNOT4-211ENST00000498534 U2AF1Q01081 240 aaKnown RBP eCLIP16.07■□□□□ 0.16
CNOT4-211ENST00000498534 RASSF7Q02833 373 aa16.07■□□□□ 0.16
CNOT4-211ENST00000498534 RSPH6AQ9H0K4 717 aa16.07■□□□□ 0.16
CNOT4-211ENST00000498534 UBR2Q8IWV8 1755 aa16.07■□□□□ 0.16
CNOT4-211ENST00000498534 SBF1O95248 1867 aa16.06■□□□□ 0.16
CNOT4-211ENST00000498534 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
CNOT4-211ENST00000498534 CEMIPQ8WUJ3 1361 aa16.05■□□□□ 0.16
CNOT4-211ENST00000498534 GLTPD2A6NH11 291 aa16.05■□□□□ 0.16
CNOT4-211ENST00000498534 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
CNOT4-211ENST00000498534 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
CNOT4-211ENST00000498534 KCNQ3O43525 872 aa16.04■□□□□ 0.16
CNOT4-211ENST00000498534 PPP2R1AP30153 589 aa16.04■□□□□ 0.16
CNOT4-211ENST00000498534 PRR5LQ6MZQ0 368 aa16.04■□□□□ 0.16
CNOT4-211ENST00000498534 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
CNOT4-211ENST00000498534 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms