RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
THBS3-209ENST00000498500 VIRMAQ69YN4 1812 aaKnown RBP16.43■□□□□ 0.22
THBS3-209ENST00000498500 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
THBS3-209ENST00000498500 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
THBS3-209ENST00000498500 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
THBS3-209ENST00000498500 PANK3Q9H999 370 aa16.43■□□□□ 0.22
THBS3-209ENST00000498500 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
THBS3-209ENST00000498500 DLEC1Q9Y238 1755 aa16.42■□□□□ 0.22
THBS3-209ENST00000498500 LMNB1P20700 586 aa16.42■□□□□ 0.22
THBS3-209ENST00000498500 PRELPP51888 382 aa16.42■□□□□ 0.22
THBS3-209ENST00000498500 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
THBS3-209ENST00000498500 GLTPD2A6NH11 291 aa16.41■□□□□ 0.22
THBS3-209ENST00000498500 DNAJC10Q8IXB1 793 aa16.41■□□□□ 0.22
THBS3-209ENST00000498500 HSPA1AP0DMV8 641 aaKnown RBP16.4■□□□□ 0.22
THBS3-209ENST00000498500 HSPA1BP0DMV9 641 aaKnown RBP16.4■□□□□ 0.22
THBS3-209ENST00000498500 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
THBS3-209ENST00000498500 NFIXQ14938 502 aa16.39■□□□□ 0.21
THBS3-209ENST00000498500 SULT6B1Q6IMI4 303 aa16.39■□□□□ 0.21
THBS3-209ENST00000498500 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
THBS3-209ENST00000498500 SOS1Q07889 1333 aaPredicted RBP16.39■□□□□ 0.21
THBS3-209ENST00000498500 NARFQ9UHQ1 456 aa16.38■□□□□ 0.21
THBS3-209ENST00000498500 DICER1Q9UPY3 1922 aaKnown RBP16.37■□□□□ 0.21
THBS3-209ENST00000498500 SERPINB2P05120 415 aa16.37■□□□□ 0.21
THBS3-209ENST00000498500 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
THBS3-209ENST00000498500 COL15A1P39059 1388 aa16.37■□□□□ 0.21
THBS3-209ENST00000498500 H0YIN7 160 aa16.36■□□□□ 0.21
THBS3-209ENST00000498500 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
THBS3-209ENST00000498500 DPY19L2Q6NUT2 758 aa16.36■□□□□ 0.21
THBS3-209ENST00000498500 MORC1Q86VD1 984 aa16.36■□□□□ 0.21
THBS3-209ENST00000498500 SLC52A2Q9HAB3 445 aa16.36■□□□□ 0.21
THBS3-209ENST00000498500 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
THBS3-209ENST00000498500 SLC39A6Q13433 755 aa16.35■□□□□ 0.21
THBS3-209ENST00000498500 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
THBS3-209ENST00000498500 LGR6Q9HBX8 967 aa16.34■□□□□ 0.21
THBS3-209ENST00000498500 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
THBS3-209ENST00000498500 NFKBIEO00221 500 aa16.33■□□□□ 0.2
THBS3-209ENST00000498500 BICDL1Q6ZP65 573 aa16.33■□□□□ 0.2
THBS3-209ENST00000498500 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.2
THBS3-209ENST00000498500 CACNA1SQ13698 1873 aa16.33■□□□□ 0.2
THBS3-209ENST00000498500 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.2
THBS3-209ENST00000498500 POTECB2RU33 542 aa16.32■□□□□ 0.2
THBS3-209ENST00000498500 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
THBS3-209ENST00000498500 ANKRD31Q8N7Z5 1873 aa16.32■□□□□ 0.2
THBS3-209ENST00000498500 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.2
THBS3-209ENST00000498500 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
THBS3-209ENST00000498500 CARMIL3Q8ND23 1372 aa16.31■□□□□ 0.2
THBS3-209ENST00000498500 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
THBS3-209ENST00000498500 RNMTO43148 476 aaKnown RBP16.31■□□□□ 0.2
THBS3-209ENST00000498500 IL13P35225 146 aa16.31■□□□□ 0.2
THBS3-209ENST00000498500 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
THBS3-209ENST00000498500 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
THBS3-209ENST00000498500 C21orf2O43822 256 aa16.3■□□□□ 0.2
THBS3-209ENST00000498500 MRC1P22897 1456 aa16.29■□□□□ 0.2
THBS3-209ENST00000498500 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
THBS3-209ENST00000498500 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
THBS3-209ENST00000498500 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
THBS3-209ENST00000498500 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
THBS3-209ENST00000498500 A0A087WZG4 1122 aa16.28■□□□□ 0.2
THBS3-209ENST00000498500 PDE6BP35913 854 aa16.28■□□□□ 0.2
THBS3-209ENST00000498500 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
THBS3-209ENST00000498500 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
THBS3-209ENST00000498500 PDZRN3Q9UPQ7 1066 aa16.28■□□□□ 0.2
THBS3-209ENST00000498500 COL11A2P13942 1736 aaPredicted RBP16.28■□□□□ 0.2
THBS3-209ENST00000498500 STARD3NLO95772 234 aa16.27■□□□□ 0.2
THBS3-209ENST00000498500 HMOX1P09601 288 aa16.27■□□□□ 0.2
THBS3-209ENST00000498500 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
THBS3-209ENST00000498500 TBC1D9BQ66K14 1250 aa16.26■□□□□ 0.19
THBS3-209ENST00000498500 CCDC24Q8N4L8 307 aa16.26■□□□□ 0.19
THBS3-209ENST00000498500 BRIP1Q9BX63 1249 aa16.26■□□□□ 0.19
THBS3-209ENST00000498500 ZNF330Q9Y3S2 320 aaPredicted RBP16.26■□□□□ 0.19
THBS3-209ENST00000498500 SLX4Q8IY92 1834 aa16.26■□□□□ 0.19
THBS3-209ENST00000498500 NPHP1O15259 732 aa16.25■□□□□ 0.19
THBS3-209ENST00000498500 DDNO94850 711 aaPredicted RBP16.25■□□□□ 0.19
THBS3-209ENST00000498500 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
THBS3-209ENST00000498500 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
THBS3-209ENST00000498500 TAOK3Q9H2K8 898 aa16.25■□□□□ 0.19
THBS3-209ENST00000498500 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
THBS3-209ENST00000498500 COL3A1P02461 1466 aaPredicted RBP16.24■□□□□ 0.19
THBS3-209ENST00000498500 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
THBS3-209ENST00000498500 POTEJP0CG39 1038 aa16.24■□□□□ 0.19
THBS3-209ENST00000498500 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
THBS3-209ENST00000498500 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
THBS3-209ENST00000498500 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
THBS3-209ENST00000498500 SCN4AP35499 1836 aa16.24■□□□□ 0.19
THBS3-209ENST00000498500 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
THBS3-209ENST00000498500 ARFGEF2Q9Y6D5 1785 aa16.23■□□□□ 0.19
THBS3-209ENST00000498500 LTBP3Q9NS15 1303 aa16.22■□□□□ 0.19
THBS3-209ENST00000498500 FOXN1O15353 648 aa16.22■□□□□ 0.19
THBS3-209ENST00000498500 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
THBS3-209ENST00000498500 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
THBS3-209ENST00000498500 ST5P78524 1137 aa16.21■□□□□ 0.19
THBS3-209ENST00000498500 SOGA3Q5TF21 947 aa16.21■□□□□ 0.19
THBS3-209ENST00000498500 CNBD1Q8NA66 436 aa16.21■□□□□ 0.19
THBS3-209ENST00000498500 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
THBS3-209ENST00000498500 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
THBS3-209ENST00000498500 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
THBS3-209ENST00000498500 CNTNAP1P78357 1384 aa16.21■□□□□ 0.19
THBS3-209ENST00000498500 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
THBS3-209ENST00000498500 TEFQ10587 303 aa16.2■□□□□ 0.18
THBS3-209ENST00000498500 PRPF40BQ6NWY9 871 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms