RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 LMNB1P20700 586 aa19.03■□□□□ 0.64
CCDC58-207ENST00000498466 NFIXQ14938 502 aa19.03■□□□□ 0.64
CCDC58-207ENST00000498466 NARFQ9UHQ1 456 aa19.03■□□□□ 0.64
CCDC58-207ENST00000498466 ADAMTS7Q9UKP4 1686 aa19.02■□□□□ 0.64
CCDC58-207ENST00000498466 GLTPD2A6NH11 291 aa19.02■□□□□ 0.64
CCDC58-207ENST00000498466 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
CCDC58-207ENST00000498466 VEGFAP15692 232 aaPredicted RBP19.02■□□□□ 0.64
CCDC58-207ENST00000498466 IL13P35225 146 aa19.02■□□□□ 0.64
CCDC58-207ENST00000498466 TNS4Q8IZW8 715 aa19.02■□□□□ 0.64
CCDC58-207ENST00000498466 LGR6Q9HBX8 967 aa19.02■□□□□ 0.64
CCDC58-207ENST00000498466 COL15A1P39059 1388 aa19.02■□□□□ 0.64
CCDC58-207ENST00000498466 SLC39A6Q13433 755 aa19.01■□□□□ 0.63
CCDC58-207ENST00000498466 TTLL6Q8N841 843 aa19.01■□□□□ 0.63
CCDC58-207ENST00000498466 SBF1O95248 1867 aa19.01■□□□□ 0.63
CCDC58-207ENST00000498466 SERPINB2P05120 415 aa19■□□□□ 0.63
CCDC58-207ENST00000498466 EIF4G2P78344 907 aaKnown RBP eCLIP19■□□□□ 0.63
CCDC58-207ENST00000498466 TRIM26Q12899 539 aaPredicted RBP19■□□□□ 0.63
CCDC58-207ENST00000498466 C2CD5Q86YS7 1000 aa19■□□□□ 0.63
CCDC58-207ENST00000498466 ZBTB1Q9Y2K1 713 aa19■□□□□ 0.63
CCDC58-207ENST00000498466 SCN11AQ9UI33 1791 aa18.99■□□□□ 0.63
CCDC58-207ENST00000498466 PRELPP51888 382 aa18.99■□□□□ 0.63
CCDC58-207ENST00000498466 H0YIN7 160 aa18.98■□□□□ 0.63
CCDC58-207ENST00000498466 RNMTO43148 476 aaKnown RBP18.98■□□□□ 0.63
CCDC58-207ENST00000498466 HSPA5P11021 654 aaKnown RBP18.98■□□□□ 0.63
CCDC58-207ENST00000498466 BCL2L12Q9HB09 334 aa18.98■□□□□ 0.63
CCDC58-207ENST00000498466 KNSTRNQ9Y448 316 aa18.98■□□□□ 0.63
CCDC58-207ENST00000498466 HMOX1P09601 288 aa18.96■□□□□ 0.63
CCDC58-207ENST00000498466 HSPA1AP0DMV8 641 aaKnown RBP18.96■□□□□ 0.63
CCDC58-207ENST00000498466 HSPA1BP0DMV9 641 aaKnown RBP18.96■□□□□ 0.63
CCDC58-207ENST00000498466 CANXP27824 592 aaKnown RBP18.96■□□□□ 0.63
CCDC58-207ENST00000498466 BICDL1Q6ZP65 573 aa18.96■□□□□ 0.63
CCDC58-207ENST00000498466 MRC1P22897 1456 aa18.96■□□□□ 0.63
CCDC58-207ENST00000498466 AFDNP55196 1824 aaKnown RBP18.95■□□□□ 0.62
CCDC58-207ENST00000498466 CARMIL3Q8ND23 1372 aa18.95■□□□□ 0.62
CCDC58-207ENST00000498466 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
CCDC58-207ENST00000498466 NFKBIEO00221 500 aa18.95■□□□□ 0.62
CCDC58-207ENST00000498466 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
CCDC58-207ENST00000498466 DPY19L2Q6NUT2 758 aa18.94■□□□□ 0.62
CCDC58-207ENST00000498466 MTHFSDQ2M296 383 aaKnown RBP18.93■□□□□ 0.62
CCDC58-207ENST00000498466 ZNF622Q969S3 477 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCDC58-207ENST00000498466 DLEC1Q9Y238 1755 aa18.93■□□□□ 0.62
CCDC58-207ENST00000498466 TIAM2Q8IVF5 1701 aa18.92■□□□□ 0.62
CCDC58-207ENST00000498466 STARD3NLO95772 234 aa18.92■□□□□ 0.62
CCDC58-207ENST00000498466 TTC5Q8N0Z6 440 aa18.92■□□□□ 0.62
CCDC58-207ENST00000498466 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
CCDC58-207ENST00000498466 A0A087WZG4 1122 aa18.91■□□□□ 0.62
CCDC58-207ENST00000498466 POTECB2RU33 542 aa18.91■□□□□ 0.62
CCDC58-207ENST00000498466 ERFEQ4G0M1 354 aa18.91■□□□□ 0.62
CCDC58-207ENST00000498466 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
CCDC58-207ENST00000498466 C21orf2O43822 256 aa18.9■□□□□ 0.62
CCDC58-207ENST00000498466 PDE6BP35913 854 aa18.9■□□□□ 0.62
CCDC58-207ENST00000498466 EIF5P55010 431 aaKnown RBP18.9■□□□□ 0.62
CCDC58-207ENST00000498466 TBC1D9BQ66K14 1250 aa18.9■□□□□ 0.62
CCDC58-207ENST00000498466 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
CCDC58-207ENST00000498466 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
CCDC58-207ENST00000498466 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.61
CCDC58-207ENST00000498466 BRIP1Q9BX63 1249 aa18.89■□□□□ 0.61
CCDC58-207ENST00000498466 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
CCDC58-207ENST00000498466 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
CCDC58-207ENST00000498466 NPHP1O15259 732 aa18.87■□□□□ 0.61
CCDC58-207ENST00000498466 DIAPH1O60610 1272 aaKnown RBP18.87■□□□□ 0.61
CCDC58-207ENST00000498466 PRR5LQ6MZQ0 368 aa18.87■□□□□ 0.61
CCDC58-207ENST00000498466 TBC1D2BQ9UPU7 963 aa18.87■□□□□ 0.61
CCDC58-207ENST00000498466 TAOK3Q9H2K8 898 aa18.86■□□□□ 0.61
CCDC58-207ENST00000498466 TEFQ10587 303 aa18.85■□□□□ 0.61
CCDC58-207ENST00000498466 CHADLQ6NUI6 762 aa18.85■□□□□ 0.61
CCDC58-207ENST00000498466 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
CCDC58-207ENST00000498466 ZNF496Q96IT1 587 aaPredicted RBP18.85■□□□□ 0.61
CCDC58-207ENST00000498466 TEX13AQ9BXU3 409 aaPredicted RBP18.85■□□□□ 0.61
CCDC58-207ENST00000498466 CREBZFQ9NS37 354 aa18.85■□□□□ 0.61
CCDC58-207ENST00000498466 MKRN1Q9UHC7 482 aaKnown RBP18.85■□□□□ 0.61
CCDC58-207ENST00000498466 CCDC88AQ3V6T2 1871 aa18.85■□□□□ 0.61
CCDC58-207ENST00000498466 HEG1Q9ULI3 1381 aa18.84■□□□□ 0.61
CCDC58-207ENST00000498466 UBR2Q8IWV8 1755 aa18.84■□□□□ 0.61
CCDC58-207ENST00000498466 ZNF790Q6PG37 636 aa18.84■□□□□ 0.61
CCDC58-207ENST00000498466 CNBD1Q8NA66 436 aa18.84■□□□□ 0.61
CCDC58-207ENST00000498466 SETDB2Q96T68 719 aa18.84■□□□□ 0.61
CCDC58-207ENST00000498466 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
CCDC58-207ENST00000498466 LTBP3Q9NS15 1303 aa18.83■□□□□ 0.61
CCDC58-207ENST00000498466 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.6
CCDC58-207ENST00000498466 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.6
CCDC58-207ENST00000498466 CNKSR1Q969H4 720 aa18.83■□□□□ 0.6
CCDC58-207ENST00000498466 ANKRD31Q8N7Z5 1873 aa18.82■□□□□ 0.6
CCDC58-207ENST00000498466 POTEIP0CG38 1075 aa18.82■□□□□ 0.6
CCDC58-207ENST00000498466 POTEJP0CG39 1038 aa18.82■□□□□ 0.6
CCDC58-207ENST00000498466 ST5P78524 1137 aa18.82■□□□□ 0.6
CCDC58-207ENST00000498466 SCN7AQ01118 1682 aa18.82■□□□□ 0.6
CCDC58-207ENST00000498466 COL11A2P13942 1736 aaPredicted RBP18.81■□□□□ 0.6
CCDC58-207ENST00000498466 GNAT3A8MTJ3 354 aa18.81■□□□□ 0.6
CCDC58-207ENST00000498466 SOGA3Q5TF21 947 aa18.81■□□□□ 0.6
CCDC58-207ENST00000498466 STYK1Q6J9G0 422 aa18.81■□□□□ 0.6
CCDC58-207ENST00000498466 PRPF40BQ6NWY9 871 aaKnown RBP18.81■□□□□ 0.6
CCDC58-207ENST00000498466 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
CCDC58-207ENST00000498466 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
CCDC58-207ENST00000498466 U2SURPO15042 1029 aaKnown RBP18.8■□□□□ 0.6
CCDC58-207ENST00000498466 A1BGP04217 495 aa18.8■□□□□ 0.6
CCDC58-207ENST00000498466 SRGNP10124 158 aa18.8■□□□□ 0.6
CCDC58-207ENST00000498466 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
CCDC58-207ENST00000498466 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
CCDC58-207ENST00000498466 MASTLQ96GX5 879 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms