RNA–Protein interactions for RNA: ENST00000498460.1

RNF8-208, Transcript of ring finger protein 8, humanhuman

TSL 3

Gene RNF8, Length 835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-208ENST00000498460 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
RNF8-208ENST00000498460 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
RNF8-208ENST00000498460 COL15A1P39059 1388 aa13.25□□□□□ -0.29
RNF8-208ENST00000498460 STARD3NLO95772 234 aa13.25□□□□□ -0.29
RNF8-208ENST00000498460 ARHGAP27Q6ZUM4 889 aa13.25□□□□□ -0.29
RNF8-208ENST00000498460 IL17REQ8NFR9 667 aa13.25□□□□□ -0.29
RNF8-208ENST00000498460 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
RNF8-208ENST00000498460 SBF1O95248 1867 aa13.25□□□□□ -0.29
RNF8-208ENST00000498460 ADCY9O60503 1353 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 DLG5Q8TDM6 1919 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
RNF8-208ENST00000498460 PRKAR2BP31323 418 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 DDR1Q08345 913 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 ZNF790Q6PG37 636 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 PIAS4Q8N2W9 510 aaPredicted RBP13.24□□□□□ -0.29
RNF8-208ENST00000498460 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
RNF8-208ENST00000498460 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
RNF8-208ENST00000498460 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
RNF8-208ENST00000498460 PPP2R1AP30153 589 aa13.23□□□□□ -0.29
RNF8-208ENST00000498460 TM4SF1P30408 202 aa13.23□□□□□ -0.29
RNF8-208ENST00000498460 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
RNF8-208ENST00000498460 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
RNF8-208ENST00000498460 RSPH6AQ9H0K4 717 aa13.23□□□□□ -0.29
RNF8-208ENST00000498460 KCNA3P22001 575 aa13.22□□□□□ -0.29
RNF8-208ENST00000498460 DALRD3Q5D0E6 543 aaKnown RBP13.22□□□□□ -0.29
RNF8-208ENST00000498460 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
RNF8-208ENST00000498460 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
RNF8-208ENST00000498460 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
RNF8-208ENST00000498460 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
RNF8-208ENST00000498460 A0A087WZG4 1122 aa13.21□□□□□ -0.29
RNF8-208ENST00000498460 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
RNF8-208ENST00000498460 CHRNA5P30532 468 aa13.21□□□□□ -0.29
RNF8-208ENST00000498460 NFIXQ14938 502 aa13.21□□□□□ -0.29
RNF8-208ENST00000498460 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
RNF8-208ENST00000498460 RTF1Q92541 710 aaKnown RBP13.21□□□□□ -0.29
RNF8-208ENST00000498460 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
RNF8-208ENST00000498460 DLEC1Q9Y238 1755 aa13.21□□□□□ -0.29
RNF8-208ENST00000498460 CACNA1SQ13698 1873 aa13.2□□□□□ -0.3
RNF8-208ENST00000498460 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
RNF8-208ENST00000498460 SERPINB2P05120 415 aa13.19□□□□□ -0.3
RNF8-208ENST00000498460 EIF5P55010 431 aaKnown RBP13.19□□□□□ -0.3
RNF8-208ENST00000498460 BICDL1Q6ZP65 573 aa13.19□□□□□ -0.3
RNF8-208ENST00000498460 SCN7AQ01118 1682 aa13.18□□□□□ -0.3
RNF8-208ENST00000498460 MCM10Q7L590 875 aa13.18□□□□□ -0.3
RNF8-208ENST00000498460 BCL2L12Q9HB09 334 aa13.18□□□□□ -0.3
RNF8-208ENST00000498460 TBC1D2BQ9UPU7 963 aa13.18□□□□□ -0.3
RNF8-208ENST00000498460 ANKRD31Q8N7Z5 1873 aa13.18□□□□□ -0.3
RNF8-208ENST00000498460 KCNQ3O43525 872 aa13.17□□□□□ -0.3
RNF8-208ENST00000498460 A1BGP04217 495 aa13.17□□□□□ -0.3
RNF8-208ENST00000498460 NEFMP07197 916 aa13.17□□□□□ -0.3
RNF8-208ENST00000498460 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
RNF8-208ENST00000498460 C9orf131Q5VYM1 1079 aa13.17□□□□□ -0.3
RNF8-208ENST00000498460 BCORQ6W2J9 1755 aa13.17□□□□□ -0.3
RNF8-208ENST00000498460 H0YIN7 160 aa13.15□□□□□ -0.3
RNF8-208ENST00000498460 NPHP1O15259 732 aa13.15□□□□□ -0.3
RNF8-208ENST00000498460 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
RNF8-208ENST00000498460 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
RNF8-208ENST00000498460 TBC1D9BQ66K14 1250 aa13.15□□□□□ -0.3
RNF8-208ENST00000498460 C2CD5Q86YS7 1000 aa13.15□□□□□ -0.3
RNF8-208ENST00000498460 DICER1Q9UPY3 1922 aaKnown RBP13.14□□□□□ -0.31
RNF8-208ENST00000498460 KIF3CO14782 793 aa13.14□□□□□ -0.31
RNF8-208ENST00000498460 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
RNF8-208ENST00000498460 TTLL6Q8N841 843 aa13.14□□□□□ -0.31
RNF8-208ENST00000498460 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
RNF8-208ENST00000498460 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
RNF8-208ENST00000498460 LAMB4A4D0S4 1761 aa13.13□□□□□ -0.31
RNF8-208ENST00000498460 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
RNF8-208ENST00000498460 HSPA6P17066 643 aa13.13□□□□□ -0.31
RNF8-208ENST00000498460 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
RNF8-208ENST00000498460 TAF7Q15545 349 aaPredicted RBP13.13□□□□□ -0.31
RNF8-208ENST00000498460 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
RNF8-208ENST00000498460 SETDB2Q96T68 719 aa13.13□□□□□ -0.31
RNF8-208ENST00000498460 NUP98P52948 1817 aa13.12□□□□□ -0.31
RNF8-208ENST00000498460 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
RNF8-208ENST00000498460 PDE6BP35913 854 aa13.12□□□□□ -0.31
RNF8-208ENST00000498460 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.318e-7■■□□□ 14.2
RNF8-208ENST00000498460 NMRK2Q9NPI5 230 aa13.12□□□□□ -0.31
RNF8-208ENST00000498460 COL11A2P13942 1736 aaPredicted RBP13.12□□□□□ -0.31
RNF8-208ENST00000498460 FER1L6Q2WGJ9 1857 aa13.12□□□□□ -0.31
RNF8-208ENST00000498460 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
RNF8-208ENST00000498460 KDM2BQ8NHM5 1336 aa13.12□□□□□ -0.31
RNF8-208ENST00000498460 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
RNF8-208ENST00000498460 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 TOMM70O94826 608 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 PRR5LQ6MZQ0 368 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
RNF8-208ENST00000498460 CCDC24Q8N4L8 307 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 CNBD1Q8NA66 436 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
RNF8-208ENST00000498460 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
RNF8-208ENST00000498460 ST5P78524 1137 aa13.1□□□□□ -0.31
RNF8-208ENST00000498460 RASSF7Q02833 373 aa13.1□□□□□ -0.31
RNF8-208ENST00000498460 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
RNF8-208ENST00000498460 ARFGEF2Q9Y6D5 1785 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms