RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ZPR1O75312 459 aa21.91■■□□□ 1.1
MUC1-220ENST00000498431 CYP19A1P11511 503 aaPredicted RBP21.91■■□□□ 1.1
MUC1-220ENST00000498431 RNMTO43148 476 aaKnown RBP21.9■■□□□ 1.1
MUC1-220ENST00000498431 HMOX1P09601 288 aa21.9■■□□□ 1.1
MUC1-220ENST00000498431 AMER1Q5JTC6 1135 aaPredicted RBP21.9■■□□□ 1.1
MUC1-220ENST00000498431 NRXN2Q9P2S2 1712 aa21.89■■□□□ 1.1
MUC1-220ENST00000498431 RASSF7Q02833 373 aa21.89■■□□□ 1.09
MUC1-220ENST00000498431 NFIXQ14938 502 aa21.89■■□□□ 1.09
MUC1-220ENST00000498431 C16orf71Q8IYS4 520 aaPredicted RBP21.89■■□□□ 1.09
MUC1-220ENST00000498431 ZBTB1Q9Y2K1 713 aa21.89■■□□□ 1.09
MUC1-220ENST00000498431 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
MUC1-220ENST00000498431 COL15A1P39059 1388 aa21.88■■□□□ 1.09
MUC1-220ENST00000498431 BCL2L12Q9HB09 334 aa21.88■■□□□ 1.09
MUC1-220ENST00000498431 RRAGCQ9HB90 399 aa21.88■■□□□ 1.09
MUC1-220ENST00000498431 KDM2BQ8NHM5 1336 aa21.87■■□□□ 1.09
MUC1-220ENST00000498431 NARFQ9UHQ1 456 aa21.87■■□□□ 1.09
MUC1-220ENST00000498431 MTHFSDQ2M296 383 aaKnown RBP21.86■■□□□ 1.09
MUC1-220ENST00000498431 DLEC1Q9Y238 1755 aa21.86■■□□□ 1.09
MUC1-220ENST00000498431 UBR2Q8IWV8 1755 aa21.85■■□□□ 1.09
MUC1-220ENST00000498431 PRELPP51888 382 aa21.85■■□□□ 1.09
MUC1-220ENST00000498431 FSTL1Q12841 308 aa21.85■■□□□ 1.09
MUC1-220ENST00000498431 CARMIL3Q8ND23 1372 aa21.84■■□□□ 1.09
MUC1-220ENST00000498431 SERPINB2P05120 415 aa21.83■■□□□ 1.09
MUC1-220ENST00000498431 KLRG1Q96E93 195 aa21.83■■□□□ 1.09
MUC1-220ENST00000498431 KIF7Q2M1P5 1343 aa21.81■■□□□ 1.08
MUC1-220ENST00000498431 CANXP27824 592 aaKnown RBP21.81■■□□□ 1.08
MUC1-220ENST00000498431 CCDC88AQ3V6T2 1871 aa21.8■■□□□ 1.08
MUC1-220ENST00000498431 VSIG10Q8N0Z9 540 aa21.8■■□□□ 1.08
MUC1-220ENST00000498431 TIAM2Q8IVF5 1701 aa21.8■■□□□ 1.08
MUC1-220ENST00000498431 LMNB1P20700 586 aa21.79■■□□□ 1.08
MUC1-220ENST00000498431 BICDL1Q6ZP65 573 aa21.79■■□□□ 1.08
MUC1-220ENST00000498431 C2CD5Q86YS7 1000 aa21.79■■□□□ 1.08
MUC1-220ENST00000498431 TTLL6Q8N841 843 aa21.79■■□□□ 1.08
MUC1-220ENST00000498431 JMYQ8N9B5 988 aa21.79■■□□□ 1.08
MUC1-220ENST00000498431 ANKRD31Q8N7Z5 1873 aa21.78■■□□□ 1.08
MUC1-220ENST00000498431 DIAPH1O60610 1272 aaKnown RBP21.78■■□□□ 1.08
MUC1-220ENST00000498431 ZC3H4Q9UPT8 1303 aaKnown RBP21.78■■□□□ 1.08
MUC1-220ENST00000498431 NFKBIEO00221 500 aa21.77■■□□□ 1.08
MUC1-220ENST00000498431 PER1O15534 1290 aaPredicted RBP21.77■■□□□ 1.08
MUC1-220ENST00000498431 EIF5P55010 431 aaKnown RBP21.77■■□□□ 1.08
MUC1-220ENST00000498431 CC2D1BQ5T0F9 858 aaKnown RBP21.77■■□□□ 1.08
MUC1-220ENST00000498431 SMC1BQ8NDV3 1235 aa21.77■■□□□ 1.08
MUC1-220ENST00000498431 GLTPD2A6NH11 291 aa21.76■■□□□ 1.07
MUC1-220ENST00000498431 COL3A1P02461 1466 aaPredicted RBP21.76■■□□□ 1.07
MUC1-220ENST00000498431 SCN7AQ01118 1682 aa21.75■■□□□ 1.07
MUC1-220ENST00000498431 H0YIN7 160 aa21.75■■□□□ 1.07
MUC1-220ENST00000498431 COL13A1Q5TAT6 717 aaPredicted RBP21.75■■□□□ 1.07
MUC1-220ENST00000498431 TBC1D9BQ66K14 1250 aa21.75■■□□□ 1.07
MUC1-220ENST00000498431 ZNF496Q96IT1 587 aaPredicted RBP21.75■■□□□ 1.07
MUC1-220ENST00000498431 COL11A2P13942 1736 aaPredicted RBP21.75■■□□□ 1.07
MUC1-220ENST00000498431 SIPA1L3O60292 1781 aaPredicted RBP21.74■■□□□ 1.07
MUC1-220ENST00000498431 STARD3NLO95772 234 aa21.74■■□□□ 1.07
MUC1-220ENST00000498431 TTC5Q8N0Z6 440 aa21.74■■□□□ 1.07
MUC1-220ENST00000498431 CCDC24Q8N4L8 307 aa21.74■■□□□ 1.07
MUC1-220ENST00000498431 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
MUC1-220ENST00000498431 VEGFAP15692 232 aaPredicted RBP21.73■■□□□ 1.07
MUC1-220ENST00000498431 IL17REQ8NFR9 667 aa21.73■■□□□ 1.07
MUC1-220ENST00000498431 HEG1Q9ULI3 1381 aa21.73■■□□□ 1.07
MUC1-220ENST00000498431 TBC1D2BQ9UPU7 963 aa21.72■■□□□ 1.07
MUC1-220ENST00000498431 POTECB2RU33 542 aa21.71■■□□□ 1.07
MUC1-220ENST00000498431 ZNF790Q6PG37 636 aa21.71■■□□□ 1.07
MUC1-220ENST00000498431 ZNF219Q9P2Y4 722 aaPredicted RBP21.71■■□□□ 1.07
MUC1-220ENST00000498431 ZNF330Q9Y3S2 320 aaPredicted RBP21.71■■□□□ 1.07
MUC1-220ENST00000498431 A0A087WZG4 1122 aa21.7■■□□□ 1.06
MUC1-220ENST00000498431 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
MUC1-220ENST00000498431 PRR5LQ6MZQ0 368 aa21.7■■□□□ 1.06
MUC1-220ENST00000498431 ZNF622Q969S3 477 aaKnown RBP eCLIP21.7■■□□□ 1.06
MUC1-220ENST00000498431 FER1L6Q2WGJ9 1857 aa21.69■■□□□ 1.06
MUC1-220ENST00000498431 GNAT3A8MTJ3 354 aa21.69■■□□□ 1.06
MUC1-220ENST00000498431 U2SURPO15042 1029 aaKnown RBP21.69■■□□□ 1.06
MUC1-220ENST00000498431 C21orf2O43822 256 aa21.69■■□□□ 1.06
MUC1-220ENST00000498431 TEFQ10587 303 aa21.69■■□□□ 1.06
MUC1-220ENST00000498431 BRIP1Q9BX63 1249 aa21.68■■□□□ 1.06
MUC1-220ENST00000498431 DICER1Q9UPY3 1922 aaKnown RBP21.68■■□□□ 1.06
MUC1-220ENST00000498431 KCNQ3O43525 872 aa21.67■■□□□ 1.06
MUC1-220ENST00000498431 A1BGP04217 495 aa21.67■■□□□ 1.06
MUC1-220ENST00000498431 CACNA1SQ13698 1873 aa21.66■■□□□ 1.06
MUC1-220ENST00000498431 CAMTA2O94983 1202 aa21.66■■□□□ 1.06
MUC1-220ENST00000498431 PDE6BP35913 854 aa21.66■■□□□ 1.06
MUC1-220ENST00000498431 IL6STP40189 918 aaPredicted RBP21.66■■□□□ 1.06
MUC1-220ENST00000498431 GAS2L2Q8NHY3 880 aa21.66■■□□□ 1.06
MUC1-220ENST00000498431 TEX13AQ9BXU3 409 aaPredicted RBP21.66■■□□□ 1.06
MUC1-220ENST00000498431 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
MUC1-220ENST00000498431 BCORQ6W2J9 1755 aa21.66■■□□□ 1.06
MUC1-220ENST00000498431 CEMIPQ8WUJ3 1361 aa21.65■■□□□ 1.06
MUC1-220ENST00000498431 ERFEQ4G0M1 354 aa21.64■■□□□ 1.05
MUC1-220ENST00000498431 PHACTR3Q96KR7 559 aa21.64■■□□□ 1.05
MUC1-220ENST00000498431 FMNL2Q96PY5 1086 aa21.64■■□□□ 1.05
MUC1-220ENST00000498431 NPC1L1Q9UHC9 1359 aa21.63■■□□□ 1.05
MUC1-220ENST00000498431 PIP4K2AP48426 406 aaPredicted RBP21.63■■□□□ 1.05
MUC1-220ENST00000498431 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
MUC1-220ENST00000498431 PDZRN3Q9UPQ7 1066 aa21.63■■□□□ 1.05
MUC1-220ENST00000498431 CAPN15O75808 1086 aa21.62■■□□□ 1.05
MUC1-220ENST00000498431 DPY19L2Q6NUT2 758 aa21.62■■□□□ 1.05
MUC1-220ENST00000498431 SETDB2Q96T68 719 aa21.62■■□□□ 1.05
MUC1-220ENST00000498431 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
MUC1-220ENST00000498431 POTEIP0CG38 1075 aa21.61■■□□□ 1.05
MUC1-220ENST00000498431 POTEJP0CG39 1038 aa21.61■■□□□ 1.05
MUC1-220ENST00000498431 HSPA1AP0DMV8 641 aaKnown RBP21.61■■□□□ 1.05
MUC1-220ENST00000498431 HSPA1BP0DMV9 641 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms