RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 SENP3-EIF4A1A0A087X0R7 540 aa30.3■■■□□ 2.44
CDKN2A-208ENST00000498124 POLRMTO00411 1230 aaKnown RBP30.3■■■□□ 2.44
CDKN2A-208ENST00000498124 CEP350Q5VT06 3117 aa30.3■■■□□ 2.44
CDKN2A-208ENST00000498124 ARFGEF1Q9Y6D6 1849 aa30.29■■■□□ 2.44
CDKN2A-208ENST00000498124 PPP2R1AP30153 589 aa30.29■■■□□ 2.44
CDKN2A-208ENST00000498124 NRXN2Q9P2S2 1712 aa30.29■■■□□ 2.44
CDKN2A-208ENST00000498124 PRKAR2BP31323 418 aa30.28■■■□□ 2.44
CDKN2A-208ENST00000498124 NARFQ9UHQ1 456 aa30.28■■■□□ 2.44
CDKN2A-208ENST00000498124 AFDNP55196 1824 aaKnown RBP30.27■■■□□ 2.44
CDKN2A-208ENST00000498124 ZPR1O75312 459 aa30.27■■■□□ 2.44
CDKN2A-208ENST00000498124 ZNF496Q96IT1 587 aaPredicted RBP30.27■■■□□ 2.44
CDKN2A-208ENST00000498124 CFAP53Q96M91 514 aa30.27■■■□□ 2.44
CDKN2A-208ENST00000498124 BCL2L12Q9HB09 334 aa30.27■■■□□ 2.44
CDKN2A-208ENST00000498124 GPBP1L1Q9HC44 474 aaPredicted RBP30.26■■■□□ 2.43
CDKN2A-208ENST00000498124 HEG1Q9ULI3 1381 aa30.26■■■□□ 2.43
CDKN2A-208ENST00000498124 TEFQ10587 303 aa30.25■■■□□ 2.43
CDKN2A-208ENST00000498124 ZNF790Q6PG37 636 aa30.25■■■□□ 2.43
CDKN2A-208ENST00000498124 TTC5Q8N0Z6 440 aa30.25■■■□□ 2.43
CDKN2A-208ENST00000498124 ZNF526Q8TF50 670 aaPredicted RBP30.25■■■□□ 2.43
CDKN2A-208ENST00000498124 FCHSD2O94868 740 aa30.23■■■□□ 2.43
CDKN2A-208ENST00000498124 NFIXQ14938 502 aa30.23■■■□□ 2.43
CDKN2A-208ENST00000498124 SCN7AQ01118 1682 aa30.23■■■□□ 2.43
CDKN2A-208ENST00000498124 CANXP27824 592 aaKnown RBP30.21■■■□□ 2.43
CDKN2A-208ENST00000498124 CHRNA5P30532 468 aa30.21■■■□□ 2.43
CDKN2A-208ENST00000498124 EIF5P55010 431 aaKnown RBP30.21■■■□□ 2.43
CDKN2A-208ENST00000498124 STARD3NLO95772 234 aa30.19■■■□□ 2.42
CDKN2A-208ENST00000498124 ARHGAP27Q6ZUM4 889 aa30.19■■■□□ 2.42
CDKN2A-208ENST00000498124 PIM2Q9P1W9 311 aa30.19■■■□□ 2.42
CDKN2A-208ENST00000498124 NUDCQ9Y266 331 aa30.19■■■□□ 2.42
CDKN2A-208ENST00000498124 DLEC1Q9Y238 1755 aa30.18■■■□□ 2.42
CDKN2A-208ENST00000498124 KCNQ3O43525 872 aa30.18■■■□□ 2.42
CDKN2A-208ENST00000498124 U2AF1L5P0DN76 240 aaPredicted RBP30.18■■■□□ 2.42
CDKN2A-208ENST00000498124 U2AF1Q01081 240 aaKnown RBP eCLIP30.18■■■□□ 2.42
CDKN2A-208ENST00000498124 CARMIL3Q8ND23 1372 aa30.15■■■□□ 2.42
CDKN2A-208ENST00000498124 KIF3CO14782 793 aa30.15■■■□□ 2.42
CDKN2A-208ENST00000498124 DALRD3Q5D0E6 543 aaKnown RBP30.15■■■□□ 2.42
CDKN2A-208ENST00000498124 FMNL2Q96PY5 1086 aa30.15■■■□□ 2.42
CDKN2A-208ENST00000498124 TEX13AQ9BXU3 409 aaPredicted RBP30.14■■■□□ 2.42
CDKN2A-208ENST00000498124 BTBD11A6QL63 1104 aa30.13■■■□□ 2.41
CDKN2A-208ENST00000498124 SERPINB2P05120 415 aa30.13■■■□□ 2.41
CDKN2A-208ENST00000498124 A0A087WZG4 1122 aa30.12■■■□□ 2.41
CDKN2A-208ENST00000498124 MCM10Q7L590 875 aa30.12■■■□□ 2.41
CDKN2A-208ENST00000498124 BCORQ6W2J9 1755 aa30.11■■■□□ 2.41
CDKN2A-208ENST00000498124 IL6STP40189 918 aaPredicted RBP30.11■■■□□ 2.41
CDKN2A-208ENST00000498124 ANKRD31Q8N7Z5 1873 aa30.1■■■□□ 2.41
CDKN2A-208ENST00000498124 A1BGP04217 495 aa30.1■■■□□ 2.41
CDKN2A-208ENST00000498124 C9orf131Q5VYM1 1079 aa30.09■■■□□ 2.41
CDKN2A-208ENST00000498124 DCTN1Q14203 1278 aa30.08■■■□□ 2.41
CDKN2A-208ENST00000498124 TBC1D9BQ66K14 1250 aa30.08■■■□□ 2.41
CDKN2A-208ENST00000498124 TBC1D2BQ9UPU7 963 aa30.08■■■□□ 2.41
CDKN2A-208ENST00000498124 SBF1O95248 1867 aa30.08■■■□□ 2.41
CDKN2A-208ENST00000498124 PRAMEF22A3QJZ6 481 aa30.07■■■□□ 2.4
CDKN2A-208ENST00000498124 ZNF316A6NFI3 1004 aaPredicted RBP30.07■■■□□ 2.4
CDKN2A-208ENST00000498124 BICDL1Q6ZP65 573 aa30.07■■■□□ 2.4
CDKN2A-208ENST00000498124 COL11A2P13942 1736 aaPredicted RBP30.06■■■□□ 2.4
CDKN2A-208ENST00000498124 ZNF330Q9Y3S2 320 aaPredicted RBP30.06■■■□□ 2.4
CDKN2A-208ENST00000498124 DLG5Q8TDM6 1919 aa30.05■■■□□ 2.4
CDKN2A-208ENST00000498124 CAMTA2O94983 1202 aa30.05■■■□□ 2.4
CDKN2A-208ENST00000498124 RTF1Q92541 710 aaKnown RBP30.05■■■□□ 2.4
CDKN2A-208ENST00000498124 USP16Q9Y5T5 823 aa30.05■■■□□ 2.4
CDKN2A-208ENST00000498124 HTATSF1O43719 755 aaKnown RBP30.03■■■□□ 2.4
CDKN2A-208ENST00000498124 PIP4K2AP48426 406 aaPredicted RBP30.02■■■□□ 2.4
CDKN2A-208ENST00000498124 C2CD5Q86YS7 1000 aa30.02■■■□□ 2.4
CDKN2A-208ENST00000498124 NMRK2Q9NPI5 230 aa30.02■■■□□ 2.4
CDKN2A-208ENST00000498124 HSPA6P17066 643 aa30.01■■■□□ 2.39
CDKN2A-208ENST00000498124 PRR5LQ6MZQ0 368 aa30.01■■■□□ 2.39
CDKN2A-208ENST00000498124 KDM3BQ7LBC6 1761 aa30■■■□□ 2.39
CDKN2A-208ENST00000498124 RNF181Q9P0P0 153 aa30■■■□□ 2.39
CDKN2A-208ENST00000498124 LAMB4A4D0S4 1761 aa30■■■□□ 2.39
CDKN2A-208ENST00000498124 SNRPA1P09661 255 aaKnown RBP29.99■■■□□ 2.39
CDKN2A-208ENST00000498124 RASSF7Q02833 373 aa29.99■■■□□ 2.39
CDKN2A-208ENST00000498124 DDX10Q13206 875 aaKnown RBP29.99■■■□□ 2.39
CDKN2A-208ENST00000498124 PLEKHF1Q96S99 279 aa29.99■■■□□ 2.39
CDKN2A-208ENST00000498124 PRELPP51888 382 aa29.98■■■□□ 2.39
CDKN2A-208ENST00000498124 TTLL6Q8N841 843 aa29.98■■■□□ 2.39
CDKN2A-208ENST00000498124 DZIP3Q86Y13 1208 aaKnown RBP29.97■■■□□ 2.39
CDKN2A-208ENST00000498124 CCDC24Q8N4L8 307 aa29.97■■■□□ 2.39
CDKN2A-208ENST00000498124 NBPF26B4DH59 902 aa29.96■■■□□ 2.39
CDKN2A-208ENST00000498124 H0YIN7 160 aa29.96■■■□□ 2.39
CDKN2A-208ENST00000498124 NBPF10Q6P3W6 841 aaKnown RBP29.96■■■□□ 2.39
CDKN2A-208ENST00000498124 NBPF15Q8N660 670 aa29.96■■■□□ 2.39
CDKN2A-208ENST00000498124 BRIP1Q9BX63 1249 aa29.96■■■□□ 2.39
CDKN2A-208ENST00000498124 TAF7Q15545 349 aaPredicted RBP29.95■■■□□ 2.39
CDKN2A-208ENST00000498124 MIS18AQ9NYP9 233 aa29.94■■■□□ 2.38
CDKN2A-208ENST00000498124 TNRC6CQ9HCJ0 1690 aaKnown RBP29.93■■■□□ 2.38
CDKN2A-208ENST00000498124 TOMM70O94826 608 aa29.93■■■□□ 2.38
CDKN2A-208ENST00000498124 SETDB2Q96T68 719 aa29.93■■■□□ 2.38
CDKN2A-208ENST00000498124 TIAM2Q8IVF5 1701 aa29.93■■■□□ 2.38
CDKN2A-208ENST00000498124 NFKBIEO00221 500 aa29.92■■■□□ 2.38
CDKN2A-208ENST00000498124 NPM2Q86SE8 214 aaKnown RBP29.92■■■□□ 2.38
CDKN2A-208ENST00000498124 PDE6BP35913 854 aa29.91■■■□□ 2.38
CDKN2A-208ENST00000498124 CNBD1Q8NA66 436 aa29.91■■■□□ 2.38
CDKN2A-208ENST00000498124 NFE2L2Q16236 605 aa29.9■■■□□ 2.38
CDKN2A-208ENST00000498124 PDZRN3Q9UPQ7 1066 aa29.9■■■□□ 2.38
CDKN2A-208ENST00000498124 ARFGEF2Q9Y6D5 1785 aa29.9■■■□□ 2.38
CDKN2A-208ENST00000498124 LMNB1P20700 586 aa29.89■■■□□ 2.38
CDKN2A-208ENST00000498124 CLEC4GQ6UXB4 293 aa29.89■■■□□ 2.38
CDKN2A-208ENST00000498124 THUMPD2Q9BTF0 503 aaKnown RBP29.89■■■□□ 2.38
CDKN2A-208ENST00000498124 ZC3H4Q9UPT8 1303 aaKnown RBP29.89■■■□□ 2.38
CDKN2A-208ENST00000498124 FER1L6Q2WGJ9 1857 aa29.89■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms