RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 AFDNP55196 1824 aaKnown RBP25.02■■□□□ 1.6
PRKCB-209ENST00000498058 KIF3CO14782 793 aa25.01■■□□□ 1.59
PRKCB-209ENST00000498058 ARHGAP27Q6ZUM4 889 aa25.01■■□□□ 1.59
PRKCB-209ENST00000498058 CEP350Q5VT06 3117 aa25■■□□□ 1.59
PRKCB-209ENST00000498058 CHRNA5P30532 468 aa25■■□□□ 1.59
PRKCB-209ENST00000498058 COL15A1P39059 1388 aa25■■□□□ 1.59
PRKCB-209ENST00000498058 VSIG10Q8N0Z9 540 aa24.99■■□□□ 1.59
PRKCB-209ENST00000498058 NARFQ9UHQ1 456 aa24.99■■□□□ 1.59
PRKCB-209ENST00000498058 ZPR1O75312 459 aa24.98■■□□□ 1.59
PRKCB-209ENST00000498058 NFIXQ14938 502 aa24.98■■□□□ 1.59
PRKCB-209ENST00000498058 PHACTR3Q96KR7 559 aa24.98■■□□□ 1.59
PRKCB-209ENST00000498058 NRXN2Q9P2S2 1712 aa24.98■■□□□ 1.59
PRKCB-209ENST00000498058 ZNF496Q96IT1 587 aaPredicted RBP24.97■■□□□ 1.59
PRKCB-209ENST00000498058 PIM2Q9P1W9 311 aa24.97■■□□□ 1.59
PRKCB-209ENST00000498058 GNAT3A8MTJ3 354 aa24.96■■□□□ 1.59
PRKCB-209ENST00000498058 CANXP27824 592 aaKnown RBP24.96■■□□□ 1.59
PRKCB-209ENST00000498058 GAS2L2Q8NHY3 880 aa24.95■■□□□ 1.58
PRKCB-209ENST00000498058 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
PRKCB-209ENST00000498058 KCNQ3O43525 872 aa24.93■■□□□ 1.58
PRKCB-209ENST00000498058 PRKAR2BP31323 418 aa24.93■■□□□ 1.58
PRKCB-209ENST00000498058 EIF5P55010 431 aaKnown RBP24.93■■□□□ 1.58
PRKCB-209ENST00000498058 DALRD3Q5D0E6 543 aaKnown RBP24.93■■□□□ 1.58
PRKCB-209ENST00000498058 ZNF790Q6PG37 636 aa24.93■■□□□ 1.58
PRKCB-209ENST00000498058 CEMIPQ8WUJ3 1361 aa24.93■■□□□ 1.58
PRKCB-209ENST00000498058 HEG1Q9ULI3 1381 aa24.93■■□□□ 1.58
PRKCB-209ENST00000498058 TEFQ10587 303 aa24.92■■□□□ 1.58
PRKCB-209ENST00000498058 C9orf131Q5VYM1 1079 aa24.92■■□□□ 1.58
PRKCB-209ENST00000498058 TTC5Q8N0Z6 440 aa24.92■■□□□ 1.58
PRKCB-209ENST00000498058 SBF1O95248 1867 aa24.92■■□□□ 1.58
PRKCB-209ENST00000498058 SERPINB2P05120 415 aa24.9■■□□□ 1.58
PRKCB-209ENST00000498058 HSPA6P17066 643 aa24.9■■□□□ 1.58
PRKCB-209ENST00000498058 PPP2R1AP30153 589 aa24.9■■□□□ 1.58
PRKCB-209ENST00000498058 NMRK2Q9NPI5 230 aa24.9■■□□□ 1.58
PRKCB-209ENST00000498058 CARMIL3Q8ND23 1372 aa24.9■■□□□ 1.58
PRKCB-209ENST00000498058 DLEC1Q9Y238 1755 aa24.89■■□□□ 1.57
PRKCB-209ENST00000498058 STARD3NLO95772 234 aa24.88■■□□□ 1.57
PRKCB-209ENST00000498058 BICDL1Q6ZP65 573 aa24.87■■□□□ 1.57
PRKCB-209ENST00000498058 ANKRD31Q8N7Z5 1873 aa24.87■■□□□ 1.57
PRKCB-209ENST00000498058 SCN7AQ01118 1682 aa24.86■■□□□ 1.57
PRKCB-209ENST00000498058 A1BGP04217 495 aa24.86■■□□□ 1.57
PRKCB-209ENST00000498058 TBC1D9BQ66K14 1250 aa24.86■■□□□ 1.57
PRKCB-209ENST00000498058 CFAP53Q96M91 514 aa24.86■■□□□ 1.57
PRKCB-209ENST00000498058 TBC1D2BQ9UPU7 963 aa24.85■■□□□ 1.57
PRKCB-209ENST00000498058 PRAMEF22A3QJZ6 481 aa24.84■■□□□ 1.57
PRKCB-209ENST00000498058 PRELPP51888 382 aa24.84■■□□□ 1.57
PRKCB-209ENST00000498058 FMNL2Q96PY5 1086 aa24.84■■□□□ 1.57
PRKCB-209ENST00000498058 BTBD11A6QL63 1104 aa24.83■■□□□ 1.57
PRKCB-209ENST00000498058 U2AF1L5P0DN76 240 aaPredicted RBP24.83■■□□□ 1.57
PRKCB-209ENST00000498058 U2AF1Q01081 240 aaKnown RBP eCLIP24.83■■□□□ 1.57
PRKCB-209ENST00000498058 RASSF7Q02833 373 aa24.83■■□□□ 1.57
PRKCB-209ENST00000498058 TEX13AQ9BXU3 409 aaPredicted RBP24.83■■□□□ 1.57
PRKCB-209ENST00000498058 RNF181Q9P0P0 153 aa24.83■■□□□ 1.57
PRKCB-209ENST00000498058 ZNF330Q9Y3S2 320 aaPredicted RBP24.83■■□□□ 1.57
PRKCB-209ENST00000498058 A0A087WZG4 1122 aa24.82■■□□□ 1.56
PRKCB-209ENST00000498058 IL6STP40189 918 aaPredicted RBP24.82■■□□□ 1.56
PRKCB-209ENST00000498058 MCM10Q7L590 875 aa24.82■■□□□ 1.56
PRKCB-209ENST00000498058 CCDC24Q8N4L8 307 aa24.82■■□□□ 1.56
PRKCB-209ENST00000498058 USP16Q9Y5T5 823 aa24.82■■□□□ 1.56
PRKCB-209ENST00000498058 PIP4K2AP48426 406 aaPredicted RBP24.81■■□□□ 1.56
PRKCB-209ENST00000498058 DCTN1Q14203 1278 aa24.81■■□□□ 1.56
PRKCB-209ENST00000498058 C2CD5Q86YS7 1000 aa24.81■■□□□ 1.56
PRKCB-209ENST00000498058 NUDCQ9Y266 331 aa24.81■■□□□ 1.56
PRKCB-209ENST00000498058 TOMM70O94826 608 aa24.8■■□□□ 1.56
PRKCB-209ENST00000498058 CAMTA2O94983 1202 aa24.8■■□□□ 1.56
PRKCB-209ENST00000498058 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
PRKCB-209ENST00000498058 COL11A2P13942 1736 aaPredicted RBP24.79■■□□□ 1.56
PRKCB-209ENST00000498058 BCORQ6W2J9 1755 aa24.79■■□□□ 1.56
PRKCB-209ENST00000498058 PRR5LQ6MZQ0 368 aa24.77■■□□□ 1.56
PRKCB-209ENST00000498058 TTLL6Q8N841 843 aa24.77■■□□□ 1.56
PRKCB-209ENST00000498058 H0YIN7 160 aa24.75■■□□□ 1.55
PRKCB-209ENST00000498058 DLG5Q8TDM6 1919 aa24.74■■□□□ 1.55
PRKCB-209ENST00000498058 NFKBIEO00221 500 aa24.74■■□□□ 1.55
PRKCB-209ENST00000498058 RRAGCQ9HB90 399 aa24.74■■□□□ 1.55
PRKCB-209ENST00000498058 DZIP3Q86Y13 1208 aaKnown RBP24.73■■□□□ 1.55
PRKCB-209ENST00000498058 RTF1Q92541 710 aaKnown RBP24.73■■□□□ 1.55
PRKCB-209ENST00000498058 BRIP1Q9BX63 1249 aa24.73■■□□□ 1.55
PRKCB-209ENST00000498058 NBPF26B4DH59 902 aa24.72■■□□□ 1.55
PRKCB-209ENST00000498058 NBPF10Q6P3W6 841 aaKnown RBP24.72■■□□□ 1.55
PRKCB-209ENST00000498058 NBPF15Q8N660 670 aa24.72■■□□□ 1.55
PRKCB-209ENST00000498058 MIS18AQ9NYP9 233 aa24.72■■□□□ 1.55
PRKCB-209ENST00000498058 TNRC6CQ9HCJ0 1690 aaKnown RBP24.72■■□□□ 1.55
PRKCB-209ENST00000498058 KDM2BQ8NHM5 1336 aa24.71■■□□□ 1.55
PRKCB-209ENST00000498058 SNRPA1P09661 255 aaKnown RBP24.71■■□□□ 1.55
PRKCB-209ENST00000498058 RBM46Q8TBY0 533 aaKnown RBP24.71■■□□□ 1.55
PRKCB-209ENST00000498058 ZNF622Q969S3 477 aaKnown RBP eCLIP24.71■■□□□ 1.55
PRKCB-209ENST00000498058 SLX4Q8IY92 1834 aa24.7■■□□□ 1.55
PRKCB-209ENST00000498058 TIAM2Q8IVF5 1701 aa24.7■■□□□ 1.54
PRKCB-209ENST00000498058 HTATSF1O43719 755 aaKnown RBP24.7■■□□□ 1.54
PRKCB-209ENST00000498058 LMNB1P20700 586 aa24.7■■□□□ 1.54
PRKCB-209ENST00000498058 DNAJC5GQ8N7S2 189 aa24.7■■□□□ 1.54
PRKCB-209ENST00000498058 SETDB2Q96T68 719 aa24.7■■□□□ 1.54
PRKCB-209ENST00000498058 ZNF219Q9P2Y4 722 aaPredicted RBP24.7■■□□□ 1.54
PRKCB-209ENST00000498058 CACNA1SQ13698 1873 aa24.7■■□□□ 1.54
PRKCB-209ENST00000498058 FER1L6Q2WGJ9 1857 aa24.7■■□□□ 1.54
PRKCB-209ENST00000498058 APLP1P51693 650 aa24.69■■□□□ 1.54
PRKCB-209ENST00000498058 C21orf2O43822 256 aa24.68■■□□□ 1.54
PRKCB-209ENST00000498058 PDE6BP35913 854 aa24.68■■□□□ 1.54
PRKCB-209ENST00000498058 PLEKHF1Q96S99 279 aa24.68■■□□□ 1.54
PRKCB-209ENST00000498058 WDR90Q96KV7 1748 aa24.67■■□□□ 1.54
PRKCB-209ENST00000498058 HTRA3P83110 453 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms