RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 FHDC1Q9C0D6 1143 aaPredicted RBP5.69□□□□□ -1.5
RIF1-212ENST00000498041 ENAMQ9NRM1 1142 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 ZNF358Q9NW07 568 aa5.69□□□□□ -1.5
RIF1-212ENST00000498041 A6NJY4 79 aa5.68□□□□□ -1.5
RIF1-212ENST00000498041 SPATA31C2B4DYI2 1134 aa5.68□□□□□ -1.5
RIF1-212ENST00000498041 M0R2N6 131 aa5.68□□□□□ -1.5
RIF1-212ENST00000498041 DKK1O94907 266 aa5.68□□□□□ -1.5
RIF1-212ENST00000498041 SEC13P55735 322 aa5.68□□□□□ -1.5
RIF1-212ENST00000498041 SRSF11Q05519 484 aaKnown RBP5.68□□□□□ -1.5
RIF1-212ENST00000498041 GAS6Q14393 721 aa5.68□□□□□ -1.5
RIF1-212ENST00000498041 TMEM214Q6NUQ4 689 aaKnown RBP5.68□□□□□ -1.5
RIF1-212ENST00000498041 ANKMY2Q8IV38 441 aa5.68□□□□□ -1.5
RIF1-212ENST00000498041 GAS2L1Q99501 681 aaPredicted RBP5.68□□□□□ -1.5
RIF1-212ENST00000498041 SFI1A8K8P3 1242 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 CDK2AP1O14519 115 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 MSTNO14793 375 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 PPP1R15AO75807 674 aaPredicted RBP5.67□□□□□ -1.5
RIF1-212ENST00000498041 FOXK2Q01167 660 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 POU4F2Q12837 409 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 DPYDQ12882 1025 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 MTFR1Q15390 333 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 WDR44Q5JSH3 913 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 GNASQ5JWF2 1037 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 PPARGC1BQ86YN6 1023 aaKnown RBP5.67□□□□□ -1.5
RIF1-212ENST00000498041 GALNT6Q8NCL4 622 aa5.67□□□□□ -1.5
RIF1-212ENST00000498041 ATG7O95352 703 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 ELOAQ14241 798 aaKnown RBP5.66□□□□□ -1.5
RIF1-212ENST00000498041 PLA2G4EQ3MJ16 856 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 NBPF10Q6P3W6 841 aaKnown RBP5.66□□□□□ -1.5
RIF1-212ENST00000498041 FOXR1Q6PIV2 292 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 TAS1R3Q7RTX0 852 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 PODNQ7Z5L7 613 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 NBPF15Q8N660 670 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 FAM200AQ8TCP9 573 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 RHBDD1Q8TEB9 315 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 GTPBP3Q969Y2 492 aaKnown RBP5.66□□□□□ -1.5
RIF1-212ENST00000498041 ARID3AQ99856 593 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 NOVA2Q9UNW9 492 aaKnown RBP5.66□□□□□ -1.5
RIF1-212ENST00000498041 IGF1RP08069 1367 aa5.66□□□□□ -1.5
RIF1-212ENST00000498041 PHF20L1A8MW92 1017 aa5.65□□□□□ -1.5
RIF1-212ENST00000498041 EPHA4P54764 986 aa5.65□□□□□ -1.5
RIF1-212ENST00000498041 TNS4Q8IZW8 715 aa5.65□□□□□ -1.5
RIF1-212ENST00000498041 TSEN2Q8NCE0 465 aaKnown RBP5.65□□□□□ -1.5
RIF1-212ENST00000498041 ZNF837Q96EG3 531 aaPredicted RBP5.65□□□□□ -1.5
RIF1-212ENST00000498041 ARXQ96QS3 562 aa5.65□□□□□ -1.5
RIF1-212ENST00000498041 SCHIP1Q9P0W5 487 aaPredicted RBP5.65□□□□□ -1.5
RIF1-212ENST00000498041 IQSEC3Q9UPP2 1182 aaPredicted RBP5.65□□□□□ -1.5
RIF1-212ENST00000498041 C4orf17Q53FE4 359 aa5.64□□□□□ -1.51
RIF1-212ENST00000498041 DCAF5Q96JK2 942 aa5.64□□□□□ -1.51
RIF1-212ENST00000498041 SPOCK3Q9BQ16 436 aa5.64□□□□□ -1.51
RIF1-212ENST00000498041 HINFPQ9BQA5 517 aa5.64□□□□□ -1.51
RIF1-212ENST00000498041 NIFKQ9BYG3 293 aaKnown RBP5.64□□□□□ -1.51
RIF1-212ENST00000498041 TIMMDC1Q9NPL8 285 aa5.64□□□□□ -1.51
RIF1-212ENST00000498041 MBIPQ9NS73 344 aa5.64□□□□□ -1.51
RIF1-212ENST00000498041 DYRK1BQ9Y463 629 aa5.64□□□□□ -1.51
RIF1-212ENST00000498041 ACIN1Q9UKV3 1341 aaKnown RBP5.64□□□□□ -1.51
RIF1-212ENST00000498041 PHKA2P46019 1235 aa5.63□□□□□ -1.51
RIF1-212ENST00000498041 DBN1Q16643 649 aa5.63□□□□□ -1.51
RIF1-212ENST00000498041 XP32Q5T750 250 aa5.63□□□□□ -1.51
RIF1-212ENST00000498041 SLC9A9Q8IVB4 645 aa5.63□□□□□ -1.51
RIF1-212ENST00000498041 BEND7Q8N7W2 519 aaPredicted RBP5.63□□□□□ -1.51
RIF1-212ENST00000498041 TRERF1Q96PN7 1200 aa5.63□□□□□ -1.51
RIF1-212ENST00000498041 CABP1Q9NZU7 370 aa5.63□□□□□ -1.51
RIF1-212ENST00000498041 ZMIZ1Q9ULJ6 1067 aa5.63□□□□□ -1.51
RIF1-212ENST00000498041 A0A1B0GTH6 734 aa5.62□□□□□ -1.51
RIF1-212ENST00000498041 ADAM23O75077 832 aa5.62□□□□□ -1.51
RIF1-212ENST00000498041 BCRP11274 1271 aa5.62□□□□□ -1.51
RIF1-212ENST00000498041 TRIM22Q8IYM9 498 aa5.62□□□□□ -1.51
RIF1-212ENST00000498041 ZNF295-AS1Q8N0V1 137 aa5.62□□□□□ -1.51
RIF1-212ENST00000498041 GAS2L2Q8NHY3 880 aa5.62□□□□□ -1.51
RIF1-212ENST00000498041 TSPAN10Q9H1Z9 355 aaPredicted RBP5.62□□□□□ -1.51
RIF1-212ENST00000498041 USP3Q9Y6I4 520 aa5.62□□□□□ -1.51
RIF1-212ENST00000498041 MX2P20592 715 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 PLA2G4AP47712 749 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 PSMA6P60900 246 aaKnown RBP5.61□□□□□ -1.51
RIF1-212ENST00000498041 TEAD4Q15561 434 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 SWI5Q1ZZU3 235 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 TBCELQ5QJ74 424 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 ATAD2Q6PL18 1390 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 STK32AQ8WU08 396 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 ACDQ96AP0 544 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 RRAGCQ9HB90 399 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 CHMP3Q9Y3E7 222 aa5.61□□□□□ -1.51
RIF1-212ENST00000498041 SERTM1A2A2V5 107 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 PPP1R12BO60237 982 aaPredicted RBP5.6□□□□□ -1.51
RIF1-212ENST00000498041 F11P03951 625 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 NOS2P35228 1153 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 TMEM164Q5U3C3 297 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 C1orf216Q8TAB5 229 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 ZDHHC1Q8WTX9 485 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 SCG3Q8WXD2 468 aaKnown RBP5.6□□□□□ -1.51
RIF1-212ENST00000498041 L3MBTL2Q969R5 705 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 AIDAQ96BJ3 306 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 ZNF232Q9UNY5 417 aa5.6□□□□□ -1.51
RIF1-212ENST00000498041 H7C1W4 665 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 C21orf2O43822 256 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 LGR5O75473 907 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 ITGB2P05107 769 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 CSB-PGBD3P0DP91 1061 aa5.59□□□□□ -1.51
RIF1-212ENST00000498041 IGFBP4P22692 258 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms