RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 KCNQ4P56696 695 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 NFATC2IPQ8NCF5 419 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 PLEKHF1Q96S99 279 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 SLC52A2Q9HAB3 445 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 LGR6Q9HBX8 967 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 ATG3Q9NT62 314 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 STK32BQ9NY57 414 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 CEMIPQ8WUJ3 1361 aa14.94□□□□□ -0.02
ERCC8-208ENST00000497892 COL5A3P25940 1745 aaPredicted RBP14.94□□□□□ -0.02
ERCC8-208ENST00000497892 SLC15A2Q16348 729 aa14.93□□□□□ -0.02
ERCC8-208ENST00000497892 PNNQ9H307 717 aaKnown RBP14.93□□□□□ -0.02
ERCC8-208ENST00000497892 TJP1Q07157 1748 aa14.92□□□□□ -0.02
ERCC8-208ENST00000497892 LOC102724428A0A0B4J2F2 783 aa14.92□□□□□ -0.02
ERCC8-208ENST00000497892 ANP32CO43423 234 aa14.92□□□□□ -0.02
ERCC8-208ENST00000497892 NEFMP07197 916 aa14.92□□□□□ -0.02
ERCC8-208ENST00000497892 SIK1P57059 783 aa14.92□□□□□ -0.02
ERCC8-208ENST00000497892 ZNF827Q17R98 1081 aa14.92□□□□□ -0.02
ERCC8-208ENST00000497892 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
ERCC8-208ENST00000497892 POTEJP0CG39 1038 aa14.91□□□□□ -0.02
ERCC8-208ENST00000497892 WDR43Q15061 677 aaKnown RBP eCLIP14.91□□□□□ -0.02
ERCC8-208ENST00000497892 IL17REQ8NFR9 667 aa14.91□□□□□ -0.02
ERCC8-208ENST00000497892 UBR3Q6ZT12 1888 aa14.91□□□□□ -0.02
ERCC8-208ENST00000497892 MAPK8IP3Q9UPT6 1336 aa14.91□□□□□ -0.02
ERCC8-208ENST00000497892 HMGB2P26583 209 aaKnown RBP14.9□□□□□ -0.02
ERCC8-208ENST00000497892 POTEFA5A3E0 1075 aa14.89□□□□□ -0.03
ERCC8-208ENST00000497892 HTATSF1O43719 755 aaKnown RBP14.89□□□□□ -0.03
ERCC8-208ENST00000497892 PYGBP11216 843 aa14.89□□□□□ -0.03
ERCC8-208ENST00000497892 TEFQ10587 303 aa14.89□□□□□ -0.03
ERCC8-208ENST00000497892 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
ERCC8-208ENST00000497892 ATP6V1AP38606 617 aa14.88□□□□□ -0.03
ERCC8-208ENST00000497892 ITPK1Q13572 414 aa14.88□□□□□ -0.03
ERCC8-208ENST00000497892 RTF1Q92541 710 aaKnown RBP14.88□□□□□ -0.03
ERCC8-208ENST00000497892 SLC4A9Q96Q91 983 aa14.88□□□□□ -0.03
ERCC8-208ENST00000497892 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
ERCC8-208ENST00000497892 CCDC184Q52MB2 194 aa14.87□□□□□ -0.03
ERCC8-208ENST00000497892 LINC00116Q8NCU8 138 aa14.87□□□□□ -0.03
ERCC8-208ENST00000497892 PDGFDQ9GZP0 370 aaPredicted RBP14.87□□□□□ -0.03
ERCC8-208ENST00000497892 ADAMTS8Q9UP79 889 aa14.87□□□□□ -0.03
ERCC8-208ENST00000497892 PNPLA7Q6ZV29 1317 aa14.87□□□□□ -0.03
ERCC8-208ENST00000497892 COL24A1Q17RW2 1714 aa14.86□□□□□ -0.03
ERCC8-208ENST00000497892 KDM3BQ7LBC6 1761 aa14.86□□□□□ -0.03
ERCC8-208ENST00000497892 PTCD1O75127 700 aaKnown RBP14.86□□□□□ -0.03
ERCC8-208ENST00000497892 MCM10Q7L590 875 aa14.86□□□□□ -0.03
ERCC8-208ENST00000497892 TFCP2L1Q9NZI6 479 aa14.86□□□□□ -0.03
ERCC8-208ENST00000497892 SLC39A6Q13433 755 aa14.85□□□□□ -0.03
ERCC8-208ENST00000497892 CCDC146Q8IYE0 955 aa14.85□□□□□ -0.03
ERCC8-208ENST00000497892 RUNDC1Q96C34 613 aa14.85□□□□□ -0.03
ERCC8-208ENST00000497892 MYH14Q7Z406 1995 aaKnown RBP14.85□□□□□ -0.03
ERCC8-208ENST00000497892 DCTN1Q14203 1278 aa14.84□□□□□ -0.03
ERCC8-208ENST00000497892 GSE1Q14687 1217 aa14.84□□□□□ -0.03
ERCC8-208ENST00000497892 IER5LQ5T953 404 aa14.84□□□□□ -0.03
ERCC8-208ENST00000497892 AK7Q96M32 723 aa14.84□□□□□ -0.03
ERCC8-208ENST00000497892 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
ERCC8-208ENST00000497892 TMPOP42166 694 aaKnown RBP14.83□□□□□ -0.04
ERCC8-208ENST00000497892 ZNF790Q6PG37 636 aa14.83□□□□□ -0.04
ERCC8-208ENST00000497892 MAMSTRQ6ZN01 415 aa14.83□□□□□ -0.04
ERCC8-208ENST00000497892 TTC5Q8N0Z6 440 aa14.83□□□□□ -0.04
ERCC8-208ENST00000497892 MRS2Q9HD23 443 aa14.83□□□□□ -0.04
ERCC8-208ENST00000497892 CNTNAP4Q9C0A0 1308 aa14.83□□□□□ -0.04
ERCC8-208ENST00000497892 C4AP0C0L4 1744 aa14.83□□□□□ -0.04
ERCC8-208ENST00000497892 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
ERCC8-208ENST00000497892 IFNLR1Q8IU57 520 aaPredicted RBP14.82□□□□□ -0.04
ERCC8-208ENST00000497892 VSIG10Q8N0Z9 540 aa14.82□□□□□ -0.04
ERCC8-208ENST00000497892 PNISRQ8TF01 805 aaKnown RBP14.82□□□□□ -0.04
ERCC8-208ENST00000497892 COLQQ9Y215 455 aaPredicted RBP14.82□□□□□ -0.04
ERCC8-208ENST00000497892 ZBTB7AO95365 584 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 RIPK4P57078 832 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 LMOD3Q0VAK6 560 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 AMIGO3Q86WK7 504 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 FLAD1Q8NFF5 587 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 ZNF496Q96IT1 587 aaPredicted RBP14.81□□□□□ -0.04
ERCC8-208ENST00000497892 MTFR1LQ9H019 292 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 SPON1Q9HCB6 807 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 HEG1Q9ULI3 1381 aa14.81□□□□□ -0.04
ERCC8-208ENST00000497892 LAMB4A4D0S4 1761 aa14.8□□□□□ -0.04
ERCC8-208ENST00000497892 GNPATO15228 680 aa14.8□□□□□ -0.04
ERCC8-208ENST00000497892 SSFA2P28290 1259 aa14.8□□□□□ -0.04
ERCC8-208ENST00000497892 RC3H1Q5TC82 1133 aaKnown RBP14.8□□□□□ -0.04
ERCC8-208ENST00000497892 COL23A1Q86Y22 540 aaPredicted RBP14.8□□□□□ -0.04
ERCC8-208ENST00000497892 SLC16A10Q8TF71 515 aa14.8□□□□□ -0.04
ERCC8-208ENST00000497892 THUMPD2Q9BTF0 503 aaKnown RBP14.8□□□□□ -0.04
ERCC8-208ENST00000497892 RRP7AQ9Y3A4 280 aaKnown RBP14.8□□□□□ -0.04
ERCC8-208ENST00000497892 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.79□□□□□ -0.04
ERCC8-208ENST00000497892 SEC24BO95487 1268 aa14.79□□□□□ -0.04
ERCC8-208ENST00000497892 TAF7Q15545 349 aaPredicted RBP14.79□□□□□ -0.04
ERCC8-208ENST00000497892 DNAJC10Q8IXB1 793 aa14.79□□□□□ -0.04
ERCC8-208ENST00000497892 FMNL2Q96PY5 1086 aa14.79□□□□□ -0.04
ERCC8-208ENST00000497892 KCNQ3O43525 872 aa14.78□□□□□ -0.04
ERCC8-208ENST00000497892 PHF14O94880 888 aa14.78□□□□□ -0.04
ERCC8-208ENST00000497892 PTGER2P43116 358 aa14.78□□□□□ -0.04
ERCC8-208ENST00000497892 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
ERCC8-208ENST00000497892 PCDHB8Q9UN66 801 aa14.78□□□□□ -0.04
ERCC8-208ENST00000497892 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
ERCC8-208ENST00000497892 INTS5Q6P9B9 1019 aaKnown RBP14.77□□□□□ -0.05
ERCC8-208ENST00000497892 RTCBQ9Y3I0 505 aaKnown RBP14.77□□□□□ -0.05
ERCC8-208ENST00000497892 APAF1O14727 1248 aa14.76□□□□□ -0.05
ERCC8-208ENST00000497892 RPS6KA4O75676 772 aa14.76□□□□□ -0.05
ERCC8-208ENST00000497892 NEUROD2Q15784 382 aa14.76□□□□□ -0.05
ERCC8-208ENST00000497892 SMIM5Q71RC9 77 aa14.76□□□□□ -0.05
ERCC8-208ENST00000497892 CCDC87Q9NVE4 849 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms