RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 VSIG10Q8N0Z9 540 aa31.04■■■□□ 2.56
TNFRSF4-203ENST00000497869 PHAXQ9H814 394 aaKnown RBP31.04■■■□□ 2.56
TNFRSF4-203ENST00000497869 PANK1Q8TE04 598 aa31.03■■■□□ 2.56
TNFRSF4-203ENST00000497869 STK31Q9BXU1 1019 aa31.03■■■□□ 2.56
TNFRSF4-203ENST00000497869 ATF7IPQ6VMQ6 1270 aa31.02■■■□□ 2.56
TNFRSF4-203ENST00000497869 LRP10Q7Z4F1 713 aa31.02■■■□□ 2.56
TNFRSF4-203ENST00000497869 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.02■■■□□ 2.56
TNFRSF4-203ENST00000497869 CLUAP1Q96AJ1 413 aa31.02■■■□□ 2.56
TNFRSF4-203ENST00000497869 BCL11BQ9C0K0 894 aaPredicted RBP31.02■■■□□ 2.56
TNFRSF4-203ENST00000497869 BTAF1O14981 1849 aa31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 LOC102724428A0A0B4J2F2 783 aa31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 NBPF26B4DH59 902 aa31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 TRIM37O94972 964 aa31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 CANXP27824 592 aaKnown RBP31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 SIK1P57059 783 aa31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 NBPF14Q5TI25 921 aa31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 NBPF10Q6P3W6 841 aaKnown RBP31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 NBPF15Q8N660 670 aa31.01■■■□□ 2.55
TNFRSF4-203ENST00000497869 A1BGP04217 495 aa31■■■□□ 2.55
TNFRSF4-203ENST00000497869 ITPK1Q13572 414 aa31■■■□□ 2.55
TNFRSF4-203ENST00000497869 DBF4Q9UBU7 674 aaPredicted RBP31■■■□□ 2.55
TNFRSF4-203ENST00000497869 SMARCC1Q92922 1105 aaPredicted RBP30.99■■■□□ 2.55
TNFRSF4-203ENST00000497869 FLIIQ13045 1269 aa30.98■■■□□ 2.55
TNFRSF4-203ENST00000497869 DDX21Q9NR30 783 aaKnown RBP eCLIP30.98■■■□□ 2.55
TNFRSF4-203ENST00000497869 KCNQ4P56696 695 aa30.98■■■□□ 2.55
TNFRSF4-203ENST00000497869 ARHGAP45Q92619 1136 aa30.98■■■□□ 2.55
TNFRSF4-203ENST00000497869 CRBNQ96SW2 442 aa30.98■■■□□ 2.55
TNFRSF4-203ENST00000497869 LAMB4A4D0S4 1761 aa30.97■■■□□ 2.55
TNFRSF4-203ENST00000497869 TJP1Q07157 1748 aa30.97■■■□□ 2.55
TNFRSF4-203ENST00000497869 NEFLP07196 543 aa30.97■■■□□ 2.55
TNFRSF4-203ENST00000497869 CYP19A1P11511 503 aaPredicted RBP30.97■■■□□ 2.55
TNFRSF4-203ENST00000497869 PDE3AQ14432 1141 aa30.97■■■□□ 2.55
TNFRSF4-203ENST00000497869 IPO8O15397 1037 aaKnown RBP30.95■■■□□ 2.55
TNFRSF4-203ENST00000497869 MYL6BP14649 208 aa30.95■■■□□ 2.55
TNFRSF4-203ENST00000497869 EXOC6Q8TAG9 804 aa30.95■■■□□ 2.55
TNFRSF4-203ENST00000497869 ATP6V1AP38606 617 aa30.95■■■□□ 2.54
TNFRSF4-203ENST00000497869 DZIP1LQ8IYY4 767 aaKnown RBP30.94■■■□□ 2.54
TNFRSF4-203ENST00000497869 PTPRCP08575 1304 aa30.93■■■□□ 2.54
TNFRSF4-203ENST00000497869 F6X3S4 739 aa30.93■■■□□ 2.54
TNFRSF4-203ENST00000497869 TEX13AQ9BXU3 409 aaPredicted RBP30.93■■■□□ 2.54
TNFRSF4-203ENST00000497869 CHMP4AQ9BY43 222 aa30.93■■■□□ 2.54
TNFRSF4-203ENST00000497869 COG6Q9Y2V7 657 aa30.93■■■□□ 2.54
TNFRSF4-203ENST00000497869 ABCC4O15439 1325 aa30.92■■■□□ 2.54
TNFRSF4-203ENST00000497869 TMEM57Q8N5G2 664 aa30.91■■■□□ 2.54
TNFRSF4-203ENST00000497869 HYPKQ9NX55 129 aa30.91■■■□□ 2.54
TNFRSF4-203ENST00000497869 API5Q9BZZ5 524 aaKnown RBP30.9■■■□□ 2.54
TNFRSF4-203ENST00000497869 ERBB4Q15303 1308 aa30.9■■■□□ 2.54
TNFRSF4-203ENST00000497869 FKBP5Q13451 457 aaPredicted RBP30.9■■■□□ 2.54
TNFRSF4-203ENST00000497869 STARD3NLO95772 234 aa30.89■■■□□ 2.54
TNFRSF4-203ENST00000497869 INTS5Q6P9B9 1019 aaKnown RBP30.89■■■□□ 2.54
TNFRSF4-203ENST00000497869 LINC00116Q8NCU8 138 aa30.89■■■□□ 2.54
TNFRSF4-203ENST00000497869 XAGE3Q8WTP9 111 aa30.89■■■□□ 2.54
TNFRSF4-203ENST00000497869 CICQ96RK0 1608 aaPredicted RBP30.88■■■□□ 2.53
TNFRSF4-203ENST00000497869 ZBTB1Q9Y2K1 713 aa30.88■■■□□ 2.53
TNFRSF4-203ENST00000497869 ADCY9O60503 1353 aa30.88■■■□□ 2.53
TNFRSF4-203ENST00000497869 AIMP1Q12904 312 aaKnown RBP30.87■■■□□ 2.53
TNFRSF4-203ENST00000497869 COPS6Q7L5N1 327 aa30.87■■■□□ 2.53
TNFRSF4-203ENST00000497869 FTSJ3Q8IY81 847 aaKnown RBP30.87■■■□□ 2.53
TNFRSF4-203ENST00000497869 LRRC4BQ9NT99 713 aa30.86■■■□□ 2.53
TNFRSF4-203ENST00000497869 LY75O60449 1722 aa30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 PI4KAP2A4QPH2 592 aa30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 CRKLP46109 303 aaKnown RBP30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 PI4KAP1Q8N8J0 262 aa30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 CCNL1Q9UK58 526 aaPredicted RBP30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 ZNF831Q5JPB2 1677 aa30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 MVPQ14764 893 aaKnown RBP30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 TTLL7Q6ZT98 887 aa30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 PROM2Q8N271 834 aa30.84■■■□□ 2.53
TNFRSF4-203ENST00000497869 CACNA1FO60840 1977 aa30.83■■■□□ 2.53
TNFRSF4-203ENST00000497869 MS4A1P11836 297 aa30.81■■■□□ 2.52
TNFRSF4-203ENST00000497869 INTS3Q68E01 1043 aaKnown RBP30.81■■■□□ 2.52
TNFRSF4-203ENST00000497869 CCDC87Q9NVE4 849 aa30.81■■■□□ 2.52
TNFRSF4-203ENST00000497869 COL5A3P25940 1745 aaPredicted RBP30.81■■■□□ 2.52
TNFRSF4-203ENST00000497869 SLC4A10Q6U841 1118 aa30.8■■■□□ 2.52
TNFRSF4-203ENST00000497869 KSR2Q6VAB6 950 aa30.8■■■□□ 2.52
TNFRSF4-203ENST00000497869 ITPRIPQ8IWB1 547 aa30.8■■■□□ 2.52
TNFRSF4-203ENST00000497869 APBA3O96018 575 aa30.79■■■□□ 2.52
TNFRSF4-203ENST00000497869 MAP3K2Q9Y2U5 619 aa30.79■■■□□ 2.52
TNFRSF4-203ENST00000497869 MYH14Q7Z406 1995 aaKnown RBP30.79■■■□□ 2.52
TNFRSF4-203ENST00000497869 RREB1Q92766 1687 aa30.78■■■□□ 2.52
TNFRSF4-203ENST00000497869 SMIM5Q71RC9 77 aa30.77■■■□□ 2.52
TNFRSF4-203ENST00000497869 DNAAF4Q8WXU2 420 aa30.77■■■□□ 2.52
TNFRSF4-203ENST00000497869 ZNF330Q9Y3S2 320 aaPredicted RBP30.77■■■□□ 2.52
TNFRSF4-203ENST00000497869 TNS1Q9HBL0 1735 aaKnown RBP30.77■■■□□ 2.52
TNFRSF4-203ENST00000497869 EIF5P55010 431 aaKnown RBP30.76■■■□□ 2.52
TNFRSF4-203ENST00000497869 AMIGO3Q86WK7 504 aa30.76■■■□□ 2.52
TNFRSF4-203ENST00000497869 PLSCR1O15162 318 aa30.76■■■□□ 2.51
TNFRSF4-203ENST00000497869 IL6STP40189 918 aaPredicted RBP30.76■■■□□ 2.51
TNFRSF4-203ENST00000497869 ANKRD13DQ6ZTN6 518 aa30.76■■■□□ 2.51
TNFRSF4-203ENST00000497869 TXNRD1Q16881 649 aa30.75■■■□□ 2.51
TNFRSF4-203ENST00000497869 BEND3Q5T5X7 828 aa30.75■■■□□ 2.51
TNFRSF4-203ENST00000497869 ERICH6BQ5W0A0 696 aa30.75■■■□□ 2.51
TNFRSF4-203ENST00000497869 CNTNAP4Q9C0A0 1308 aa30.75■■■□□ 2.51
TNFRSF4-203ENST00000497869 ZBTB7BO15156 539 aaPredicted RBP30.74■■■□□ 2.51
TNFRSF4-203ENST00000497869 DDX58O95786 925 aaKnown RBP30.73■■■□□ 2.51
TNFRSF4-203ENST00000497869 RIC3Q7Z5B4 369 aa30.73■■■□□ 2.51
TNFRSF4-203ENST00000497869 PLBD2Q8NHP8 589 aa30.73■■■□□ 2.51
TNFRSF4-203ENST00000497869 PXDNLA1KZ92 1463 aa30.72■■■□□ 2.51
TNFRSF4-203ENST00000497869 ZBTB3Q9H5J0 574 aa30.72■■■□□ 2.51
TNFRSF4-203ENST00000497869 DDX19BQ9UMR2 479 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms