RNA–Protein interactions for RNA: ENST00000497754.1

TMEM164-208, Transcript of transmembrane protein 164, human

TSL 2

Gene TMEM164, Length 236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM164-208	ENST00000497754	ARFGEF1	Q9Y6D6	1849 aa		29.33	■■■□□ 2.29
TMEM164-208	ENST00000497754	GIGYF1	O75420	1035 aa	Predicted RBP	29.32	■■■□□ 2.28
TMEM164-208	ENST00000497754	DPEP1	P16444	411 aa		29.32	■■■□□ 2.28
TMEM164-208	ENST00000497754	TM4SF1	P30408	202 aa		29.32	■■■□□ 2.28
TMEM164-208	ENST00000497754	USPL1	Q5W0Q7	1092 aa		29.32	■■■□□ 2.28
TMEM164-208	ENST00000497754	ZPR1	O75312	459 aa		29.31	■■■□□ 2.28
TMEM164-208	ENST00000497754	ZNF790	Q6PG37	636 aa		29.31	■■■□□ 2.28
TMEM164-208	ENST00000497754	NARF	Q9UHQ1	456 aa		29.31	■■■□□ 2.28
TMEM164-208	ENST00000497754	NRXN2	Q9P2S2	1712 aa		29.31	■■■□□ 2.28
TMEM164-208	ENST00000497754	HEG1	Q9ULI3	1381 aa		29.3	■■■□□ 2.28
TMEM164-208	ENST00000497754	POLRMT	O00411	1230 aa	Known RBP	29.3	■■■□□ 2.28
TMEM164-208	ENST00000497754	ZNF496	Q96IT1	587 aa	Predicted RBP	29.3	■■■□□ 2.28
TMEM164-208	ENST00000497754	BCS1L	Q9Y276	419 aa		29.29	■■■□□ 2.28
TMEM164-208	ENST00000497754	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.28	■■■□□ 2.28
TMEM164-208	ENST00000497754	KCNA3	P22001	575 aa		29.28	■■■□□ 2.28
TMEM164-208	ENST00000497754	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.28	■■■□□ 2.28
TMEM164-208	ENST00000497754	FCHSD2	O94868	740 aa		29.26	■■■□□ 2.27
TMEM164-208	ENST00000497754	STARD3NL	O95772	234 aa		29.26	■■■□□ 2.27
TMEM164-208	ENST00000497754	BCL2L12	Q9HB09	334 aa		29.26	■■■□□ 2.27
TMEM164-208	ENST00000497754	CANX	P27824	592 aa	Known RBP	29.25	■■■□□ 2.27
TMEM164-208	ENST00000497754	SCN7A	Q01118	1682 aa		29.25	■■■□□ 2.27
TMEM164-208	ENST00000497754	EIF5	P55010	431 aa	Known RBP	29.24	■■■□□ 2.27
TMEM164-208	ENST00000497754	NFIX	Q14938	502 aa		29.24	■■■□□ 2.27
TMEM164-208	ENST00000497754	TEX13A	Q9BXU3	409 aa	Predicted RBP	29.24	■■■□□ 2.27
TMEM164-208	ENST00000497754	FMNL2	Q96PY5	1086 aa		29.22	■■■□□ 2.27
TMEM164-208	ENST00000497754	GPBP1L1	Q9HC44	474 aa	Predicted RBP	29.22	■■■□□ 2.27
TMEM164-208	ENST00000497754	DLEC1	Q9Y238	1755 aa		29.21	■■■□□ 2.27
TMEM164-208	ENST00000497754	BTBD11	A6QL63	1104 aa		29.21	■■■□□ 2.27
TMEM164-208	ENST00000497754	KCNQ3	O43525	872 aa		29.21	■■■□□ 2.27
TMEM164-208	ENST00000497754	PIM2	Q9P1W9	311 aa		29.21	■■■□□ 2.27
TMEM164-208	ENST00000497754	DLG5	Q8TDM6	1919 aa		29.21	■■■□□ 2.27
TMEM164-208	ENST00000497754		A0A087WZG4	1122 aa		29.19	■■■□□ 2.26
TMEM164-208	ENST00000497754	SENP3-EIF4A1	A0A087X0R7	540 aa		29.18	■■■□□ 2.26
TMEM164-208	ENST00000497754	CHRNA5	P30532	468 aa		29.18	■■■□□ 2.26
TMEM164-208	ENST00000497754	MCM10	Q7L590	875 aa		29.18	■■■□□ 2.26
TMEM164-208	ENST00000497754	RTF1	Q92541	710 aa	Known RBP	29.18	■■■□□ 2.26
TMEM164-208	ENST00000497754	ARHGAP27	Q6ZUM4	889 aa		29.17	■■■□□ 2.26
TMEM164-208	ENST00000497754	ZNF526	Q8TF50	670 aa	Predicted RBP	29.17	■■■□□ 2.26
TMEM164-208	ENST00000497754	BCOR	Q6W2J9	1755 aa		29.16	■■■□□ 2.26
TMEM164-208	ENST00000497754	HTATSF1	O43719	755 aa	Known RBP	29.16	■■■□□ 2.26
TMEM164-208	ENST00000497754	IL6ST	P40189	918 aa	Predicted RBP	29.16	■■■□□ 2.26
TMEM164-208	ENST00000497754	DALRD3	Q5D0E6	543 aa	Known RBP	29.16	■■■□□ 2.26
TMEM164-208	ENST00000497754	SERPINB2	P05120	415 aa		29.15	■■■□□ 2.26
TMEM164-208	ENST00000497754	A1BG	P04217	495 aa		29.14	■■■□□ 2.26
TMEM164-208	ENST00000497754	SBF1	O95248	1867 aa		29.13	■■■□□ 2.25
TMEM164-208	ENST00000497754	ANKRD31	Q8N7Z5	1873 aa		29.13	■■■□□ 2.25
TMEM164-208	ENST00000497754	DCTN1	Q14203	1278 aa		29.13	■■■□□ 2.25
TMEM164-208	ENST00000497754	TBC1D9B	Q66K14	1250 aa		29.11	■■■□□ 2.25
TMEM164-208	ENST00000497754	TBC1D2B	Q9UPU7	963 aa		29.11	■■■□□ 2.25
TMEM164-208	ENST00000497754	ZNF330	Q9Y3S2	320 aa	Predicted RBP	29.11	■■■□□ 2.25
TMEM164-208	ENST00000497754	USP16	Q9Y5T5	823 aa		29.11	■■■□□ 2.25
TMEM164-208	ENST00000497754	CARMIL3	Q8ND23	1372 aa		29.11	■■■□□ 2.25
TMEM164-208	ENST00000497754	KDM3B	Q7LBC6	1761 aa		29.09	■■■□□ 2.25
TMEM164-208	ENST00000497754	PRAMEF22	A3QJZ6	481 aa		29.09	■■■□□ 2.25
TMEM164-208	ENST00000497754	BICDL1	Q6ZP65	573 aa		29.09	■■■□□ 2.25
TMEM164-208	ENST00000497754	PLEKHF1	Q96S99	279 aa		29.09	■■■□□ 2.25
TMEM164-208	ENST00000497754	LAMB4	A4D0S4	1761 aa		29.08	■■■□□ 2.25
TMEM164-208	ENST00000497754	SNRPA1	P09661	255 aa	Known RBP	29.08	■■■□□ 2.25
TMEM164-208	ENST00000497754	CAMTA2	O94983	1202 aa		29.07	■■■□□ 2.24
TMEM164-208	ENST00000497754	KIF3C	O14782	793 aa		29.06	■■■□□ 2.24
TMEM164-208	ENST00000497754	C9orf131	Q5VYM1	1079 aa		29.06	■■■□□ 2.24
TMEM164-208	ENST00000497754	TAF7	Q15545	349 aa	Predicted RBP	29.05	■■■□□ 2.24
TMEM164-208	ENST00000497754	COL11A2	P13942	1736 aa	Predicted RBP	29.05	■■■□□ 2.24
TMEM164-208	ENST00000497754	NEFM	P07197	916 aa		29.04	■■■□□ 2.24
TMEM164-208	ENST00000497754	NPM2	Q86SE8	214 aa	Known RBP	29.04	■■■□□ 2.24
TMEM164-208	ENST00000497754	PIP4K2A	P48426	406 aa	Predicted RBP	29.03	■■■□□ 2.24
TMEM164-208	ENST00000497754	DZIP3	Q86Y13	1208 aa	Known RBP	29.03	■■■□□ 2.24
TMEM164-208	ENST00000497754	C2CD5	Q86YS7	1000 aa		29.03	■■■□□ 2.24
TMEM164-208	ENST00000497754	NFE2L2	Q16236	605 aa		29.01	■■■□□ 2.23
TMEM164-208	ENST00000497754	PRR5L	Q6MZQ0	368 aa		29.01	■■■□□ 2.23
TMEM164-208	ENST00000497754	CCDC88A	Q3V6T2	1871 aa		29	■■■□□ 2.23
TMEM164-208	ENST00000497754		H0YIN7	160 aa		29	■■■□□ 2.23
TMEM164-208	ENST00000497754	RALBP1	Q15311	655 aa		29	■■■□□ 2.23
TMEM164-208	ENST00000497754	TTLL6	Q8N841	843 aa		29	■■■□□ 2.23
TMEM164-208	ENST00000497754	MIS18A	Q9NYP9	233 aa		29	■■■□□ 2.23
TMEM164-208	ENST00000497754	NBPF26	B4DH59	902 aa		28.99	■■■□□ 2.23
TMEM164-208	ENST00000497754	NBPF10	Q6P3W6	841 aa	Known RBP	28.99	■■■□□ 2.23
TMEM164-208	ENST00000497754	NBPF15	Q8N660	670 aa		28.99	■■■□□ 2.23
TMEM164-208	ENST00000497754	SETDB2	Q96T68	719 aa		28.99	■■■□□ 2.23
TMEM164-208	ENST00000497754	BRIP1	Q9BX63	1249 aa		28.99	■■■□□ 2.23
TMEM164-208	ENST00000497754	PNN	Q9H307	717 aa	Known RBP	28.98	■■■□□ 2.23
TMEM164-208	ENST00000497754	RNF181	Q9P0P0	153 aa		28.98	■■■□□ 2.23
TMEM164-208	ENST00000497754	PDZRN3	Q9UPQ7	1066 aa		28.98	■■■□□ 2.23
TMEM164-208	ENST00000497754	PDE6B	P35913	854 aa		28.97	■■■□□ 2.23
TMEM164-208	ENST00000497754	CLEC4G	Q6UXB4	293 aa		28.97	■■■□□ 2.23
TMEM164-208	ENST00000497754	PNISR	Q8TF01	805 aa	Known RBP	28.97	■■■□□ 2.23
TMEM164-208	ENST00000497754	CCDC24	Q8N4L8	307 aa		28.96	■■■□□ 2.23
TMEM164-208	ENST00000497754	ARFGEF2	Q9Y6D5	1785 aa		28.96	■■■□□ 2.23
TMEM164-208	ENST00000497754	MAPK8IP3	Q9UPT6	1336 aa		28.95	■■■□□ 2.23
TMEM164-208	ENST00000497754	CACNA1S	Q13698	1873 aa		28.95	■■■□□ 2.23
TMEM164-208	ENST00000497754	RASSF7	Q02833	373 aa		28.95	■■■□□ 2.22
TMEM164-208	ENST00000497754	CNBD1	Q8NA66	436 aa		28.95	■■■□□ 2.22
TMEM164-208	ENST00000497754	THUMPD2	Q9BTF0	503 aa	Known RBP	28.95	■■■□□ 2.22
TMEM164-208	ENST00000497754	NMRK2	Q9NPI5	230 aa		28.95	■■■□□ 2.22
TMEM164-208	ENST00000497754	FER1L6	Q2WGJ9	1857 aa		28.94	■■■□□ 2.22
TMEM164-208	ENST00000497754	TNRC6C	Q9HCJ0	1690 aa	Known RBP	28.93	■■■□□ 2.22
TMEM164-208	ENST00000497754	RGL2	O15211	777 aa		28.93	■■■□□ 2.22
TMEM164-208	ENST00000497754	HSPA6	P17066	643 aa		28.93	■■■□□ 2.22
TMEM164-208	ENST00000497754	ZNF652	Q9Y2D9	606 aa		28.93	■■■□□ 2.22
TMEM164-208	ENST00000497754	TIAM2	Q8IVF5	1701 aa		28.93	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms