RNA–Protein interactions for RNA: ENST00000497697.5

SMTN-220, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-220ENST00000497697 FMNL2Q96PY5 1086 aa27.84■■■□□ 2.05
SMTN-220ENST00000497697 PARP3Q9Y6F1 533 aa27.84■■■□□ 2.05
SMTN-220ENST00000497697 COL15A1P39059 1388 aa27.84■■■□□ 2.05
SMTN-220ENST00000497697 GRIN3BO60391 1043 aa27.83■■■□□ 2.05
SMTN-220ENST00000497697 STARD3NLO95772 234 aa27.83■■■□□ 2.05
SMTN-220ENST00000497697 KIF13BQ9NQT8 1826 aa27.83■■■□□ 2.05
SMTN-220ENST00000497697 C10orf71Q711Q0 1435 aa27.83■■■□□ 2.05
SMTN-220ENST00000497697 ZPR1O75312 459 aa27.82■■■□□ 2.04
SMTN-220ENST00000497697 DDR1Q08345 913 aa27.82■■■□□ 2.04
SMTN-220ENST00000497697 TEX13AQ9BXU3 409 aaPredicted RBP27.81■■■□□ 2.04
SMTN-220ENST00000497697 NARFQ9UHQ1 456 aa27.81■■■□□ 2.04
SMTN-220ENST00000497697 NEFMP07197 916 aa27.8■■■□□ 2.04
SMTN-220ENST00000497697 ZNF784Q8NCA9 323 aaPredicted RBP27.8■■■□□ 2.04
SMTN-220ENST00000497697 PXDNLA1KZ92 1463 aa27.8■■■□□ 2.04
SMTN-220ENST00000497697 KIAA1551Q9HCM1 1747 aa27.79■■■□□ 2.04
SMTN-220ENST00000497697 MYBBP1AQ9BQG0 1328 aaKnown RBP27.79■■■□□ 2.04
SMTN-220ENST00000497697 TM4SF1P30408 202 aa27.79■■■□□ 2.04
SMTN-220ENST00000497697 EIF5P55010 431 aaKnown RBP27.79■■■□□ 2.04
SMTN-220ENST00000497697 BCL2L12Q9HB09 334 aa27.79■■■□□ 2.04
SMTN-220ENST00000497697 DLG5Q8TDM6 1919 aa27.79■■■□□ 2.04
SMTN-220ENST00000497697 NFE2L2Q16236 605 aa27.78■■■□□ 2.04
SMTN-220ENST00000497697 A0A0G2JLW4 131 aa27.77■■■□□ 2.04
SMTN-220ENST00000497697 PRAMEF22A3QJZ6 481 aa27.77■■■□□ 2.04
SMTN-220ENST00000497697 POLRMTO00411 1230 aaKnown RBP27.77■■■□□ 2.04
SMTN-220ENST00000497697 A1BGP04217 495 aa27.77■■■□□ 2.04
SMTN-220ENST00000497697 TGFB2P61812 414 aa27.77■■■□□ 2.04
SMTN-220ENST00000497697 N4BP2Q86UW6 1770 aaPredicted RBP27.76■■■□□ 2.03
SMTN-220ENST00000497697 TAF7Q15545 349 aaPredicted RBP27.76■■■□□ 2.03
SMTN-220ENST00000497697 USP16Q9Y5T5 823 aa27.76■■■□□ 2.03
SMTN-220ENST00000497697 PNNQ9H307 717 aaKnown RBP27.75■■■□□ 2.03
SMTN-220ENST00000497697 MIS18AQ9NYP9 233 aa27.75■■■□□ 2.03
SMTN-220ENST00000497697 DPEP1P16444 411 aa27.74■■■□□ 2.03
SMTN-220ENST00000497697 NFIXQ14938 502 aa27.74■■■□□ 2.03
SMTN-220ENST00000497697 MAPK8IP3Q9UPT6 1336 aa27.73■■■□□ 2.03
SMTN-220ENST00000497697 THUMPD2Q9BTF0 503 aaKnown RBP27.73■■■□□ 2.03
SMTN-220ENST00000497697 ZNF330Q9Y3S2 320 aaPredicted RBP27.73■■■□□ 2.03
SMTN-220ENST00000497697 A0A087WZG4 1122 aa27.72■■■□□ 2.03
SMTN-220ENST00000497697 IL6STP40189 918 aaPredicted RBP27.72■■■□□ 2.03
SMTN-220ENST00000497697 SNRPA1P09661 255 aaKnown RBP27.71■■■□□ 2.03
SMTN-220ENST00000497697 TBC1D2BQ9UPU7 963 aa27.71■■■□□ 2.03
SMTN-220ENST00000497697 KCNA3P22001 575 aa27.7■■■□□ 2.02
SMTN-220ENST00000497697 PIP4K2AP48426 406 aaPredicted RBP27.7■■■□□ 2.02
SMTN-220ENST00000497697 PRKRIP1Q9H875 184 aaPredicted RBP27.69■■■□□ 2.02
SMTN-220ENST00000497697 ZEB1P37275 1124 aaPredicted RBP27.68■■■□□ 2.02
SMTN-220ENST00000497697 BICDL1Q6ZP65 573 aa27.67■■■□□ 2.02
SMTN-220ENST00000497697 BCS1LQ9Y276 419 aa27.67■■■□□ 2.02
SMTN-220ENST00000497697 AFDNP55196 1824 aaKnown RBP27.67■■■□□ 2.02
SMTN-220ENST00000497697 SERPINB2P05120 415 aa27.66■■■□□ 2.02
SMTN-220ENST00000497697 TBC1D9BQ66K14 1250 aa27.66■■■□□ 2.02
SMTN-220ENST00000497697 NRXN2Q9P2S2 1712 aa27.65■■■□□ 2.02
SMTN-220ENST00000497697 RIPK4P57078 832 aa27.65■■■□□ 2.02
SMTN-220ENST00000497697 PNISRQ8TF01 805 aaKnown RBP27.65■■■□□ 2.02
SMTN-220ENST00000497697 SCN7AQ01118 1682 aa27.65■■■□□ 2.02
SMTN-220ENST00000497697 BRCA1P38398 1863 aaKnown RBP27.64■■■□□ 2.02
SMTN-220ENST00000497697 KDM3BQ7LBC6 1761 aa27.64■■■□□ 2.02
SMTN-220ENST00000497697 CAMTA2O94983 1202 aa27.64■■■□□ 2.02
SMTN-220ENST00000497697 CHRNA5P30532 468 aa27.64■■■□□ 2.02
SMTN-220ENST00000497697 TMPOP42166 694 aaKnown RBP27.64■■■□□ 2.02
SMTN-220ENST00000497697 CCDC146Q8IYE0 955 aa27.64■■■□□ 2.02
SMTN-220ENST00000497697 NBPF26B4DH59 902 aa27.63■■■□□ 2.01
SMTN-220ENST00000497697 NBPF10Q6P3W6 841 aaKnown RBP27.63■■■□□ 2.01
SMTN-220ENST00000497697 NBPF15Q8N660 670 aa27.63■■■□□ 2.01
SMTN-220ENST00000497697 EIF4A1P60842 406 aaKnown RBP27.62■■■□□ 2.01
SMTN-220ENST00000497697 NPM2Q86SE8 214 aaKnown RBP27.62■■■□□ 2.01
SMTN-220ENST00000497697 DZIP3Q86Y13 1208 aaKnown RBP27.62■■■□□ 2.01
SMTN-220ENST00000497697 PIM2Q9P1W9 311 aa27.61■■■□□ 2.01
SMTN-220ENST00000497697 RRP7AQ9Y3A4 280 aaKnown RBP27.61■■■□□ 2.01
SMTN-220ENST00000497697 GIGYF1O75420 1035 aaPredicted RBP27.6■■■□□ 2.01
SMTN-220ENST00000497697 WDR43Q15061 677 aaKnown RBP eCLIP27.6■■■□□ 2.01
SMTN-220ENST00000497697 ADAMTS8Q9UP79 889 aa27.6■■■□□ 2.01
SMTN-220ENST00000497697 CARMIL3Q8ND23 1372 aa27.6■■■□□ 2.01
SMTN-220ENST00000497697 ADCY9O60503 1353 aa27.58■■■□□ 2.01
SMTN-220ENST00000497697 BCORQ6W2J9 1755 aa27.58■■■□□ 2
SMTN-220ENST00000497697 RUNDC1Q96C34 613 aa27.57■■■□□ 2
SMTN-220ENST00000497697 ATP10DQ9P241 1426 aa27.57■■■□□ 2
SMTN-220ENST00000497697 LAMB4A4D0S4 1761 aa27.56■■■□□ 2
SMTN-220ENST00000497697 NEUROD2Q15784 382 aa27.56■■■□□ 2
SMTN-220ENST00000497697 DALRD3Q5D0E6 543 aaKnown RBP27.56■■■□□ 2
SMTN-220ENST00000497697 ARHGAP27Q6ZUM4 889 aa27.56■■■□□ 2
SMTN-220ENST00000497697 CCDC24Q8N4L8 307 aa27.55■■■□□ 2
SMTN-220ENST00000497697 TSPYL4Q9UJ04 414 aa27.55■■■□□ 2
SMTN-220ENST00000497697 LMOD3Q0VAK6 560 aa27.54■■■□□ 2
SMTN-220ENST00000497697 PRR5LQ6MZQ0 368 aa27.54■■■□□ 2
SMTN-220ENST00000497697 SETDB2Q96T68 719 aa27.54■■■□□ 2
SMTN-220ENST00000497697 ARFGEF1Q9Y6D6 1849 aa27.54■■■□□ 2
SMTN-220ENST00000497697 CLEC4GQ6UXB4 293 aa27.52■■■□□ 2
SMTN-220ENST00000497697 TRIM35Q9UPQ4 493 aa27.52■■■□□ 2
SMTN-220ENST00000497697 C2CD5Q86YS7 1000 aa27.51■■□□□ 1.99
SMTN-220ENST00000497697 ANKRD31Q8N7Z5 1873 aa27.51■■□□□ 1.99
SMTN-220ENST00000497697 NGEFQ8N5V2 710 aa27.5■■□□□ 1.99
SMTN-220ENST00000497697 HLFQ16534 295 aa27.49■■□□□ 1.99
SMTN-220ENST00000497697 BRIP1Q9BX63 1249 aa27.49■■□□□ 1.99
SMTN-220ENST00000497697 BABAM1Q9NWV8 329 aa27.49■■□□□ 1.99
SMTN-220ENST00000497697 DLEC1Q9Y238 1755 aa27.48■■□□□ 1.99
SMTN-220ENST00000497697 H0YIN7 160 aa27.48■■□□□ 1.99
SMTN-220ENST00000497697 CNBD1Q8NA66 436 aa27.48■■□□□ 1.99
SMTN-220ENST00000497697 ZNF652Q9Y2D9 606 aa27.48■■□□□ 1.99
SMTN-220ENST00000497697 ZNF316A6NFI3 1004 aaPredicted RBP27.47■■□□□ 1.99
SMTN-220ENST00000497697 MYL6BP14649 208 aa27.47■■□□□ 1.99
SMTN-220ENST00000497697 ZNF526Q8TF50 670 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms