RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 SNRPBP14678 240 aaKnown RBP11.91□□□□□ -0.5
VPS45-210ENST00000497638 PRPF38BQ5VTL8 546 aaKnown RBP11.91□□□□□ -0.5
VPS45-210ENST00000497638 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.91□□□□□ -0.5
VPS45-210ENST00000497638 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
VPS45-210ENST00000497638 DAPK1P53355 1430 aa11.91□□□□□ -0.5
VPS45-210ENST00000497638 ANKRD30AQ9BXX3 1397 aa11.91□□□□□ -0.5
VPS45-210ENST00000497638 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
VPS45-210ENST00000497638 ADAMTS13Q76LX8 1427 aa11.9□□□□□ -0.5
VPS45-210ENST00000497638 VPS8Q8N3P4 1428 aa11.9□□□□□ -0.5
VPS45-210ENST00000497638 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
VPS45-210ENST00000497638 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
VPS45-210ENST00000497638 QTRT2Q9H974 415 aaKnown RBP11.9□□□□□ -0.5
VPS45-210ENST00000497638 TMEM131LA2VDJ0 1609 aa11.89□□□□□ -0.51
VPS45-210ENST00000497638 NHSL1Q5SYE7 1610 aa11.89□□□□□ -0.51
VPS45-210ENST00000497638 PLEKHG3A1L390 1219 aa11.89□□□□□ -0.51
VPS45-210ENST00000497638 CAPN5O15484 640 aaPredicted RBP11.89□□□□□ -0.51
VPS45-210ENST00000497638 WFS1O76024 890 aa11.89□□□□□ -0.51
VPS45-210ENST00000497638 VARSP26640 1264 aaKnown RBP11.89□□□□□ -0.51
VPS45-210ENST00000497638 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
VPS45-210ENST00000497638 TLL2Q9Y6L7 1015 aa11.89□□□□□ -0.51
VPS45-210ENST00000497638 PTPN23Q9H3S7 1636 aa11.89□□□□□ -0.51
VPS45-210ENST00000497638 TRPM2O94759 1503 aa11.88□□□□□ -0.51
VPS45-210ENST00000497638 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
VPS45-210ENST00000497638 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
VPS45-210ENST00000497638 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
VPS45-210ENST00000497638 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
VPS45-210ENST00000497638 PNPLA6Q8IY17 1366 aa11.87□□□□□ -0.51
VPS45-210ENST00000497638 MST1RQ04912 1400 aa11.86□□□□□ -0.51
VPS45-210ENST00000497638 MAP10Q9P2G4 905 aa11.86□□□□□ -0.51
VPS45-210ENST00000497638 LIMD1Q9UGP4 676 aa11.86□□□□□ -0.51
VPS45-210ENST00000497638 EP400Q96L91 3159 aa11.85□□□□□ -0.51
VPS45-210ENST00000497638 LCE2AQ5TA79 106 aaPredicted RBP11.84□□□□□ -0.51
VPS45-210ENST00000497638 AMOTL2Q9Y2J4 779 aa11.84□□□□□ -0.51
VPS45-210ENST00000497638 PTPRUQ92729 1446 aa11.84□□□□□ -0.51
VPS45-210ENST00000497638 SETBP1Q9Y6X0 1596 aa11.84□□□□□ -0.51
VPS45-210ENST00000497638 ADGRL2O95490 1459 aa11.83□□□□□ -0.52
VPS45-210ENST00000497638 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
VPS45-210ENST00000497638 F12P00748 615 aaPredicted RBP11.83□□□□□ -0.52
VPS45-210ENST00000497638 BMP1P13497 986 aa11.83□□□□□ -0.52
VPS45-210ENST00000497638 AGERQ15109 404 aa11.83□□□□□ -0.52
VPS45-210ENST00000497638 QPCTQ16769 361 aa11.83□□□□□ -0.52
VPS45-210ENST00000497638 FAM174AQ8TBP5 190 aa11.83□□□□□ -0.52
VPS45-210ENST00000497638 UNC13BO14795 1591 aa11.83□□□□□ -0.52
VPS45-210ENST00000497638 PER1O15534 1290 aaPredicted RBP11.82□□□□□ -0.52
VPS45-210ENST00000497638 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
VPS45-210ENST00000497638 NNTQ13423 1086 aa11.82□□□□□ -0.52
VPS45-210ENST00000497638 CCDC125Q86Z20 511 aa11.82□□□□□ -0.52
VPS45-210ENST00000497638 FOXJ1Q92949 421 aa11.82□□□□□ -0.52
VPS45-210ENST00000497638 CHIC2Q9UKJ5 165 aa11.82□□□□□ -0.52
VPS45-210ENST00000497638 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
VPS45-210ENST00000497638 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
VPS45-210ENST00000497638 ANKRD50Q9ULJ7 1429 aa11.81□□□□□ -0.52
VPS45-210ENST00000497638 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
VPS45-210ENST00000497638 MPNDQ8N594 471 aa11.81□□□□□ -0.52
VPS45-210ENST00000497638 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
VPS45-210ENST00000497638 TERTO14746 1132 aaKnown RBP11.8□□□□□ -0.52
VPS45-210ENST00000497638 LILRB3O75022 631 aa11.8□□□□□ -0.52
VPS45-210ENST00000497638 ADAMTS2O95450 1211 aa11.8□□□□□ -0.52
VPS45-210ENST00000497638 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
VPS45-210ENST00000497638 TRIM46Q7Z4K8 759 aa11.8□□□□□ -0.52
VPS45-210ENST00000497638 RSPH6AQ9H0K4 717 aa11.8□□□□□ -0.52
VPS45-210ENST00000497638 USP21Q9UK80 565 aa11.8□□□□□ -0.52
VPS45-210ENST00000497638 LAMC1P11047 1609 aa11.79□□□□□ -0.52
VPS45-210ENST00000497638 ATRNO75882 1429 aa11.79□□□□□ -0.52
VPS45-210ENST00000497638 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
VPS45-210ENST00000497638 HELBQ8NG08 1087 aaPredicted RBP11.79□□□□□ -0.52
VPS45-210ENST00000497638 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
VPS45-210ENST00000497638 POLR3EQ9NVU0 708 aa11.78□□□□□ -0.52
VPS45-210ENST00000497638 NRXN3Q9Y4C0 1643 aa11.78□□□□□ -0.52
VPS45-210ENST00000497638 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
VPS45-210ENST00000497638 DDX17Q92841 729 aaKnown RBP11.77□□□□□ -0.53
VPS45-210ENST00000497638 E9PCH4 1651 aa11.77□□□□□ -0.53
VPS45-210ENST00000497638 ADH1CP00326 375 aa11.76□□□□□ -0.53
VPS45-210ENST00000497638 WDR4P57081 412 aaKnown RBP11.76□□□□□ -0.53
VPS45-210ENST00000497638 BPHLQ86WA6 291 aaPredicted RBP11.76□□□□□ -0.53
VPS45-210ENST00000497638 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
VPS45-210ENST00000497638 NALCNQ8IZF0 1738 aa11.76□□□□□ -0.53
VPS45-210ENST00000497638 C1orf167Q5SNV9 1468 aa11.76□□□□□ -0.53
VPS45-210ENST00000497638 LRP5O75197 1615 aa11.75□□□□□ -0.53
VPS45-210ENST00000497638 IQGAP3Q86VI3 1631 aa11.75□□□□□ -0.53
VPS45-210ENST00000497638 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
VPS45-210ENST00000497638 COL22A1Q8NFW1 1626 aaPredicted RBP11.75□□□□□ -0.53
VPS45-210ENST00000497638 ZFP42Q96MM3 310 aa11.74□□□□□ -0.53
VPS45-210ENST00000497638 CDK15Q96Q40 435 aa11.74□□□□□ -0.53
VPS45-210ENST00000497638 BLMP54132 1417 aaPredicted RBP11.74□□□□□ -0.53
VPS45-210ENST00000497638 METP08581 1390 aa11.73□□□□□ -0.53
VPS45-210ENST00000497638 SCARF1Q14162 830 aa11.73□□□□□ -0.53
VPS45-210ENST00000497638 SLC16A10Q8TF71 515 aa11.73□□□□□ -0.53
VPS45-210ENST00000497638 MYOM2P54296 1465 aa11.72□□□□□ -0.53
VPS45-210ENST00000497638 TIMP2P16035 220 aa11.72□□□□□ -0.53
VPS45-210ENST00000497638 C4orf48Q5BLP8 95 aa11.72□□□□□ -0.53
VPS45-210ENST00000497638 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
VPS45-210ENST00000497638 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
VPS45-210ENST00000497638 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
VPS45-210ENST00000497638 MRPL14Q6P1L8 145 aaKnown RBP11.71□□□□□ -0.53
VPS45-210ENST00000497638 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.7□□□□□ -0.54
VPS45-210ENST00000497638 NR5A1Q13285 461 aa11.7□□□□□ -0.54
VPS45-210ENST00000497638 PURBQ96QR8 312 aaKnown RBP11.7□□□□□ -0.54
VPS45-210ENST00000497638 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
VPS45-210ENST00000497638 WIPF1O43516 503 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms