RNA–Protein interactions for RNA: ENST00000497617.1

TSFM-206, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 3

Gene TSFM, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-206ENST00000497617 USPL1Q5W0Q7 1092 aa17.73■□□□□ 0.43
TSFM-206ENST00000497617 NPM2Q86SE8 214 aaKnown RBP17.73■□□□□ 0.43
TSFM-206ENST00000497617 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
TSFM-206ENST00000497617 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
TSFM-206ENST00000497617 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
TSFM-206ENST00000497617 CEMIPQ8WUJ3 1361 aa17.72■□□□□ 0.43
TSFM-206ENST00000497617 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
TSFM-206ENST00000497617 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
TSFM-206ENST00000497617 RALBP1Q15311 655 aa17.71■□□□□ 0.43
TSFM-206ENST00000497617 TEX13AQ9BXU3 409 aaPredicted RBP17.71■□□□□ 0.43
TSFM-206ENST00000497617 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
TSFM-206ENST00000497617 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
TSFM-206ENST00000497617 KIAA1551Q9HCM1 1747 aa17.7■□□□□ 0.42
TSFM-206ENST00000497617 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
TSFM-206ENST00000497617 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
TSFM-206ENST00000497617 A0A0G2JLW4 131 aa17.69■□□□□ 0.42
TSFM-206ENST00000497617 KCNQ3O43525 872 aa17.69■□□□□ 0.42
TSFM-206ENST00000497617 A0A087WZG4 1122 aa17.68■□□□□ 0.42
TSFM-206ENST00000497617 TGFB2P61812 414 aa17.68■□□□□ 0.42
TSFM-206ENST00000497617 DDR1Q08345 913 aa17.68■□□□□ 0.42
TSFM-206ENST00000497617 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
TSFM-206ENST00000497617 BCS1LQ9Y276 419 aa17.68■□□□□ 0.42
TSFM-206ENST00000497617 BRCA1P38398 1863 aaKnown RBP17.67■□□□□ 0.42
TSFM-206ENST00000497617 HTATSF1O43719 755 aaKnown RBP17.67■□□□□ 0.42
TSFM-206ENST00000497617 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
TSFM-206ENST00000497617 DPEP1P16444 411 aa17.66■□□□□ 0.42
TSFM-206ENST00000497617 SCN7AQ01118 1682 aa17.66■□□□□ 0.42
TSFM-206ENST00000497617 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
TSFM-206ENST00000497617 A1BGP04217 495 aa17.65■□□□□ 0.42
TSFM-206ENST00000497617 LAMB4A4D0S4 1761 aa17.65■□□□□ 0.42
TSFM-206ENST00000497617 POLRMTO00411 1230 aaKnown RBP17.64■□□□□ 0.41
TSFM-206ENST00000497617 NFIXQ14938 502 aa17.64■□□□□ 0.41
TSFM-206ENST00000497617 TAF7Q15545 349 aaPredicted RBP17.64■□□□□ 0.41
TSFM-206ENST00000497617 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
TSFM-206ENST00000497617 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
TSFM-206ENST00000497617 KDM3BQ7LBC6 1761 aa17.63■□□□□ 0.41
TSFM-206ENST00000497617 UTRNP46939 3433 aa17.63■□□□□ 0.41
TSFM-206ENST00000497617 ARFGEF1Q9Y6D6 1849 aa17.63■□□□□ 0.41
TSFM-206ENST00000497617 NPHP1O15259 732 aa17.63■□□□□ 0.41
TSFM-206ENST00000497617 SNRPA1P09661 255 aaKnown RBP17.63■□□□□ 0.41
TSFM-206ENST00000497617 IL6STP40189 918 aaPredicted RBP17.63■□□□□ 0.41
TSFM-206ENST00000497617 PIP4K2AP48426 406 aaPredicted RBP17.63■□□□□ 0.41
TSFM-206ENST00000497617 EIF5P55010 431 aaKnown RBP17.63■□□□□ 0.41
TSFM-206ENST00000497617 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
TSFM-206ENST00000497617 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
TSFM-206ENST00000497617 PRAMEF22A3QJZ6 481 aa17.62■□□□□ 0.41
TSFM-206ENST00000497617 SERPINB2P05120 415 aa17.62■□□□□ 0.41
TSFM-206ENST00000497617 TM4SF1P30408 202 aa17.62■□□□□ 0.41
TSFM-206ENST00000497617 WDR43Q15061 677 aaKnown RBP eCLIP17.62■□□□□ 0.41
TSFM-206ENST00000497617 ARHGAP27Q6ZUM4 889 aa17.62■□□□□ 0.41
TSFM-206ENST00000497617 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
TSFM-206ENST00000497617 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
TSFM-206ENST00000497617 USP16Q9Y5T5 823 aa17.62■□□□□ 0.41
TSFM-206ENST00000497617 CHRNA5P30532 468 aa17.61■□□□□ 0.41
TSFM-206ENST00000497617 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
TSFM-206ENST00000497617 ZNF526Q8TF50 670 aaPredicted RBP17.61■□□□□ 0.41
TSFM-206ENST00000497617 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
TSFM-206ENST00000497617 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
TSFM-206ENST00000497617 ATP10DQ9P241 1426 aa17.61■□□□□ 0.41
TSFM-206ENST00000497617 NRXN2Q9P2S2 1712 aa17.61■□□□□ 0.41
TSFM-206ENST00000497617 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
TSFM-206ENST00000497617 GIGYF1O75420 1035 aaPredicted RBP17.6■□□□□ 0.41
TSFM-206ENST00000497617 DZIP3Q86Y13 1208 aaKnown RBP17.6■□□□□ 0.41
TSFM-206ENST00000497617 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
TSFM-206ENST00000497617 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
TSFM-206ENST00000497617 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
TSFM-206ENST00000497617 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
TSFM-206ENST00000497617 CACNA1SQ13698 1873 aa17.58■□□□□ 0.41
TSFM-206ENST00000497617 DLEC1Q9Y238 1755 aa17.58■□□□□ 0.41
TSFM-206ENST00000497617 RIPK4P57078 832 aa17.58■□□□□ 0.4
TSFM-206ENST00000497617 NEUROD2Q15784 382 aa17.58■□□□□ 0.4
TSFM-206ENST00000497617 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
TSFM-206ENST00000497617 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
TSFM-206ENST00000497617 CARMIL3Q8ND23 1372 aa17.56■□□□□ 0.4
TSFM-206ENST00000497617 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
TSFM-206ENST00000497617 NGEFQ8N5V2 710 aa17.56■□□□□ 0.4
TSFM-206ENST00000497617 SETDB2Q96T68 719 aa17.56■□□□□ 0.4
TSFM-206ENST00000497617 GPBP1L1Q9HC44 474 aaPredicted RBP17.56■□□□□ 0.4
TSFM-206ENST00000497617 ZNF652Q9Y2D9 606 aa17.56■□□□□ 0.4
TSFM-206ENST00000497617 CAMTA2O94983 1202 aa17.55■□□□□ 0.4
TSFM-206ENST00000497617 KCNA3P22001 575 aa17.55■□□□□ 0.4
TSFM-206ENST00000497617 C2CD5Q86YS7 1000 aa17.55■□□□□ 0.4
TSFM-206ENST00000497617 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
TSFM-206ENST00000497617 TSPYL4Q9UJ04 414 aa17.55■□□□□ 0.4
TSFM-206ENST00000497617 H0YIN7 160 aa17.54■□□□□ 0.4
TSFM-206ENST00000497617 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
TSFM-206ENST00000497617 ST5P78524 1137 aa17.53■□□□□ 0.4
TSFM-206ENST00000497617 CNBD1Q8NA66 436 aa17.53■□□□□ 0.4
TSFM-206ENST00000497617 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
TSFM-206ENST00000497617 ADCY9O60503 1353 aa17.53■□□□□ 0.4
TSFM-206ENST00000497617 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.4
TSFM-206ENST00000497617 CCDC88AQ3V6T2 1871 aa17.52■□□□□ 0.4
TSFM-206ENST00000497617 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
TSFM-206ENST00000497617 MYL6BP14649 208 aa17.52■□□□□ 0.4
TSFM-206ENST00000497617 C1QTNF8P60827 252 aa17.52■□□□□ 0.4
TSFM-206ENST00000497617 EIF4A1P60842 406 aaKnown RBP17.52■□□□□ 0.4
TSFM-206ENST00000497617 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
TSFM-206ENST00000497617 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
TSFM-206ENST00000497617 ZNF622Q969S3 477 aaKnown RBP eCLIP17.52■□□□□ 0.4
TSFM-206ENST00000497617 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms