RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RGS12O14924 1447 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 GOLGA6L19H0YKK7 550 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 LARGE1O95461 756 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 ZNF165P49910 485 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 SKILP12757 684 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 SYCP1Q15431 976 aa15.5■□□□□ 0.07
GAPVD1-220ENST00000497580 RAD51AP2Q09MP3 1159 aa15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 NUTM1Q86Y26 1132 aa15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 C10orf67Q8IYJ2 551 aa15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 CASTP20810 708 aaKnown RBP15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
GAPVD1-220ENST00000497580 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 RSPH14Q9UHP6 348 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 USP16Q9Y5T5 823 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 A0A087WWV3 80 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 ANAPC15P60006 121 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 RTL1A6NKG5 1358 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 HTATSF1O43719 755 aaKnown RBP15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 TTC6Q86TZ1 520 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 MIS18AQ9NYP9 233 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 FEZ2Q9UHY8 353 aaPredicted RBP15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 LIMCH1Q9UPQ0 1083 aa15.48■□□□□ 0.07
GAPVD1-220ENST00000497580 SLU7O95391 586 aaKnown RBP15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 RAD50Q92878 1312 aa15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 RUFY3Q7L099 469 aa15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 PLCH2O75038 1416 aa15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 BMS1Q14692 1282 aaKnown RBP15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 WAPLQ7Z5K2 1190 aa15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 TRPM2O94759 1503 aa15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 NSD2O96028 1365 aa15.47■□□□□ 0.07
GAPVD1-220ENST00000497580 KRT85P78386 507 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 CEBPZQ03701 1054 aaKnown RBP15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 ERO1AQ96HE7 468 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 ABCA6Q8N139 1617 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 LARP1BQ659C4 914 aaKnown RBP15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 ZNF446Q9NWS9 450 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 MTMR6Q9Y217 621 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 SBNO2Q9Y2G9 1366 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 BECN2A8MW95 431 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 KRBA2Q6ZNG9 492 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 C14orf93Q9H972 538 aaKnown RBP15.46■□□□□ 0.07
GAPVD1-220ENST00000497580 ATP10DQ9P241 1426 aa15.46■□□□□ 0.06
GAPVD1-220ENST00000497580 TEX35Q5T0J7 233 aa15.45■□□□□ 0.06
GAPVD1-220ENST00000497580 LRRN4CLQ8ND94 238 aa15.45■□□□□ 0.06
GAPVD1-220ENST00000497580 CCDC69A6NI79 296 aa15.45■□□□□ 0.06
GAPVD1-220ENST00000497580 VGFO15240 615 aaPredicted RBP15.45■□□□□ 0.06
GAPVD1-220ENST00000497580 ARHGAP29Q52LW3 1261 aa15.45■□□□□ 0.06
GAPVD1-220ENST00000497580 SNX14Q9Y5W7 946 aa15.45■□□□□ 0.06
GAPVD1-220ENST00000497580 CYP2C19P33261 490 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 FOSBP53539 338 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 TCEANC2Q96MN5 208 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 JAKMIP1Q96N16 626 aaKnown RBP15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 MCM10Q7L590 875 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 NCKAP5LQ9HCH0 1330 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 TRIM66O15016 1216 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 HOMER1Q86YM7 354 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 LRRC8AQ8IWT6 810 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
GAPVD1-220ENST00000497580 TULP2O00295 520 aa15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 CLCN6P51797 869 aa15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 SYT10Q6XYQ8 523 aa15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 ZCCHC17Q9NP64 241 aaKnown RBP15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 CDC37L1Q7L3B6 337 aa15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 HSPA4P34932 840 aa15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 CDK19Q9BWU1 502 aa15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 LRRFIP2Q9Y608 721 aaKnown RBP15.43■□□□□ 0.06
GAPVD1-220ENST00000497580 UHRF1BP1LA0JNW5 1464 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 PREX2Q70Z35 1606 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 GYS2P54840 703 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 STK3Q13188 491 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 G2E3Q7L622 706 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 CCDC34Q96HJ3 373 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 TSPYL1Q9H0U9 437 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 TOMM22Q9NS69 142 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 POLKQ9UBT6 870 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 PNMA6EA0A0J9YXQ4 647 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 SEC31AO94979 1220 aaKnown RBP15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 IDI1Q13907 227 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 PLA2G4DQ86XP0 818 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 PDRG1Q9NUG6 133 aa15.42■□□□□ 0.06
GAPVD1-220ENST00000497580 GNAI2P04899 355 aa15.41■□□□□ 0.06
GAPVD1-220ENST00000497580 ST5P78524 1137 aa15.41■□□□□ 0.06
GAPVD1-220ENST00000497580 TMCO3Q6UWJ1 677 aa15.41■□□□□ 0.06
GAPVD1-220ENST00000497580 RASSF4Q9H2L5 321 aa15.41■□□□□ 0.06
GAPVD1-220ENST00000497580 NR1I2O75469 434 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms