RNA–Protein interactions for RNA: ENST00000497319.1

RBMS3-216, Transcript of RNA binding motif single stranded interacting protein 3, human

TSL 3

Gene RBMS3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBMS3-216	ENST00000497319	CAMTA1	Q9Y6Y1	1673 aa		13.54	□□□□□ -0.24
RBMS3-216	ENST00000497319	ARHGEF25	Q86VW2	580 aa		13.54	□□□□□ -0.24
RBMS3-216	ENST00000497319	SIRT2	Q8IXJ6	389 aa		13.54	□□□□□ -0.24
RBMS3-216	ENST00000497319	DCC	P43146	1447 aa		13.54	□□□□□ -0.24
RBMS3-216	ENST00000497319	FAM208A	Q9UK61	1670 aa	Known RBP	13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	RBM6	P78332	1123 aa	Known RBP	13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	EVX2	Q03828	476 aa		13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	TAF7	Q15545	349 aa	Predicted RBP	13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	IL17RE	Q8NFR9	667 aa		13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	LTV1	Q96GA3	475 aa	Predicted RBP	13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	DDX27	Q96GQ7	796 aa	Known RBP	13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	ORAI2	Q96SN7	254 aa		13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	C19orf44	Q9H6X5	657 aa		13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	UPF2	Q9HAU5	1272 aa	Known RBP	13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	CEMIP	Q8WUJ3	1361 aa		13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	LMO7	Q8WWI1	1683 aa		13.53	□□□□□ -0.24
RBMS3-216	ENST00000497319	LMOD2	Q6P5Q4	547 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	ANKRD44	Q8N8A2	993 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	TBC1D32	Q96NH3	1257 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	C1orf115	Q9H7X2	142 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	MIS18A	Q9NYP9	233 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	ATP10D	Q9P241	1426 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	ALS2	Q96Q42	1657 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	CACNA1F	O60840	1977 aa		13.52	□□□□□ -0.25
RBMS3-216	ENST00000497319	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	NUTM2E	B1AL46	878 aa	Predicted RBP	13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	GC	P02774	474 aa		13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	NBPF6	Q5VWK0	638 aa		13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	KRT28	Q7Z3Y7	464 aa		13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	NBPF4	Q96M43	638 aa		13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	LNPK	Q9C0E8	428 aa		13.51	□□□□□ -0.25
RBMS3-216	ENST00000497319	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	OVOS2	A0A0G2JMS6	1433 aa		13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	CCT4	P50991	539 aa	Known RBP	13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	CLCN6	P51797	869 aa		13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	CCDC30	Q5VVM6	783 aa		13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	DCTPP1	Q9H773	170 aa		13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	DAXX	Q9UER7	740 aa	Predicted RBP	13.5	□□□□□ -0.25
RBMS3-216	ENST00000497319	BMP2KL	Q5H9B9	411 aa		13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	ANKRD45	Q5TZF3	282 aa		13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	G2E3	Q7L622	706 aa		13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	USHBP1	Q8N6Y0	703 aa		13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	STK31	Q9BXU1	1019 aa		13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	QTRT2	Q9H974	415 aa	Known RBP	13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	RGPD2	P0DJD1	1756 aa		13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	KDM3B	Q7LBC6	1761 aa		13.49	□□□□□ -0.25
RBMS3-216	ENST00000497319	PXDNL	A1KZ92	1463 aa		13.48	□□□□□ -0.25
RBMS3-216	ENST00000497319	AMOT	Q4VCS5	1084 aa		13.48	□□□□□ -0.25
RBMS3-216	ENST00000497319	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.48	□□□□□ -0.25
RBMS3-216	ENST00000497319	AKAP4	Q5JQC9	854 aa		13.48	□□□□□ -0.25
RBMS3-216	ENST00000497319	CEP85	Q6P2H3	762 aa		13.48	□□□□□ -0.25
RBMS3-216	ENST00000497319	ATRN	O75882	1429 aa		13.47	□□□□□ -0.25
RBMS3-216	ENST00000497319	TULP1	O00294	542 aa	Predicted RBP	13.47	□□□□□ -0.25
RBMS3-216	ENST00000497319	HOXB7	P09629	217 aa		13.47	□□□□□ -0.25
RBMS3-216	ENST00000497319	BECN1	Q14457	450 aa		13.47	□□□□□ -0.25
RBMS3-216	ENST00000497319	CHMP4A	Q9BY43	222 aa		13.47	□□□□□ -0.25
RBMS3-216	ENST00000497319	USP35	Q9P2H5	1018 aa		13.47	□□□□□ -0.25
RBMS3-216	ENST00000497319	ABCC6	O95255	1503 aa		13.47	□□□□□ -0.25
RBMS3-216	ENST00000497319	SEMA3E	O15041	775 aa		13.46	□□□□□ -0.25
RBMS3-216	ENST00000497319	ATN1	P54259	1190 aa	Predicted RBP	13.46	□□□□□ -0.25
RBMS3-216	ENST00000497319	DPY19L2	Q6NUT2	758 aa		13.46	□□□□□ -0.25
RBMS3-216	ENST00000497319	ANKRD24	Q8TF21	1146 aa		13.46	□□□□□ -0.25
RBMS3-216	ENST00000497319	C8orf37	Q96NL8	207 aa		13.46	□□□□□ -0.25
RBMS3-216	ENST00000497319	MEIS3	Q99687	375 aa		13.46	□□□□□ -0.25
RBMS3-216	ENST00000497319	ADAMTS7	Q9UKP4	1686 aa		13.45	□□□□□ -0.26
RBMS3-216	ENST00000497319	ATF3	P18847	181 aa		13.45	□□□□□ -0.26
RBMS3-216	ENST00000497319	SLC4A3	P48751	1232 aa		13.45	□□□□□ -0.26
RBMS3-216	ENST00000497319	XPC	Q01831	940 aa	Predicted RBP	13.45	□□□□□ -0.26
RBMS3-216	ENST00000497319	FLII	Q13045	1269 aa		13.45	□□□□□ -0.26
RBMS3-216	ENST00000497319	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.45	□□□□□ -0.26
RBMS3-216	ENST00000497319	PLEKHG2	Q9H7P9	1386 aa		13.45	□□□□□ -0.26
RBMS3-216	ENST00000497319	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.44	□□□□□ -0.26
RBMS3-216	ENST00000497319	EIF4A1	P60842	406 aa	Known RBP	13.44	□□□□□ -0.26
RBMS3-216	ENST00000497319	RTL5	Q5HYW3	569 aa	Predicted RBP	13.44	□□□□□ -0.26
RBMS3-216	ENST00000497319	DDX17	Q92841	729 aa	Known RBP	13.44	□□□□□ -0.26
RBMS3-216	ENST00000497319	LRRC59	Q96AG4	307 aa	Known RBP	13.44	□□□□□ -0.26
RBMS3-216	ENST00000497319	C22orf23	Q9BZE7	217 aa		13.44	□□□□□ -0.26
RBMS3-216	ENST00000497319	ZBTB7C	A1YPR0	619 aa		13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	RNMT	O43148	476 aa	Known RBP	13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	EIF5B	O60841	1220 aa	Known RBP	13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	HMMR	O75330	724 aa		13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	GNAI3	P08754	354 aa		13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	CAMK2B	Q13554	666 aa		13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	LGR6	Q9HBX8	967 aa		13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	COL18A1	P39060	1754 aa		13.43	□□□□□ -0.26
RBMS3-216	ENST00000497319	TESPA1	A2RU30	521 aa	Predicted RBP	13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319		F6X3S4	739 aa		13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	ATMIN	O43313	823 aa	Predicted RBP	13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	GNAI2	P04899	355 aa		13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	PLEKHM2	Q8IWE5	1019 aa		13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	PDCD7	Q8N8D1	485 aa	Known RBP	13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	SIPA1L3	O60292	1781 aa	Predicted RBP	13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	BCL9L	Q86UU0	1499 aa		13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	PXDN	Q92626	1479 aa		13.42	□□□□□ -0.26
RBMS3-216	ENST00000497319	BRWD3	Q6RI45	1802 aa		13.41	□□□□□ -0.26
RBMS3-216	ENST00000497319	TNS3	Q68CZ2	1445 aa		13.41	□□□□□ -0.26
RBMS3-216	ENST00000497319	RBM25	P49756	843 aa	Known RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms