RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, human

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH4-208	ENST00000497287	PRAMEF22	A3QJZ6	481 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	PTCD1	O75127	700 aa	Known RBP	9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	RLBP1	P12271	317 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	FLII	Q13045	1269 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	MVP	Q14764	893 aa	Known RBP	9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	SMARCC1	Q92922	1105 aa	Predicted RBP	9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	RBM42	Q9BTD8	480 aa	Known RBP	9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	DDX21	Q9NR30	783 aa	Known RBP eCLIP	9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	HYPK	Q9NX55	129 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	CHPF2	Q9P2E5	772 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	ASAP1	Q9ULH1	1129 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	TNN	Q9UQP3	1299 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	COG6	Q9Y2V7	657 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	ERBB4	Q15303	1308 aa		9.28	□□□□□ -0.92
GPATCH4-208	ENST00000497287	UBR2	Q8IWV8	1755 aa		9.27	□□□□□ -0.92
GPATCH4-208	ENST00000497287	KCP	Q6ZWJ8	1503 aa		9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	FKBP5	Q13451	457 aa	Predicted RBP	9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	G2E3	Q7L622	706 aa		9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	ITPRIP	Q8IWB1	547 aa		9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	TMEM57	Q8N5G2	664 aa		9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	UPF1	Q92900	1129 aa	Known RBP eCLIP	9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	DDX19B	Q9UMR2	479 aa		9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	USP16	Q9Y5T5	823 aa		9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	ABCC4	O15439	1325 aa		9.27	□□□□□ -0.93
GPATCH4-208	ENST00000497287	STARD3NL	O95772	234 aa		9.26	□□□□□ -0.93
GPATCH4-208	ENST00000497287	DDX58	O95786	925 aa	Known RBP	9.26	□□□□□ -0.93
GPATCH4-208	ENST00000497287	KRT27	Q7Z3Y8	459 aa		9.26	□□□□□ -0.93
GPATCH4-208	ENST00000497287	CCDC136	Q96JN2	1154 aa		9.26	□□□□□ -0.93
GPATCH4-208	ENST00000497287	KCNQ2	O43526	872 aa		9.25	□□□□□ -0.93
GPATCH4-208	ENST00000497287	CCT4	P50991	539 aa	Known RBP	9.25	□□□□□ -0.93
GPATCH4-208	ENST00000497287	INTS3	Q68E01	1043 aa	Known RBP	9.25	□□□□□ -0.93
GPATCH4-208	ENST00000497287	FAM196A	Q6ZSG2	479 aa		9.25	□□□□□ -0.93
GPATCH4-208	ENST00000497287	PHAX	Q9H814	394 aa	Known RBP	9.25	□□□□□ -0.93
GPATCH4-208	ENST00000497287	C5	P01031	1676 aa		9.25	□□□□□ -0.93
GPATCH4-208	ENST00000497287	LAMB4	A4D0S4	1761 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	ANXA1	P04083	346 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	MYL6B	P14649	208 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	PDIA6	Q15084	440 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	PROSER3	Q2NL68	480 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	SLC4A10	Q6U841	1118 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	DNAJC10	Q8IXB1	793 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	PALLD	Q8WX93	1383 aa		9.24	□□□□□ -0.93
GPATCH4-208	ENST00000497287	LOC102724428	A0A0B4J2F2	783 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287		F6X3S4	739 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	A1BG	P04217	495 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	ATP6V1A	P38606	617 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	SIK1	P57059	783 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	FAM182B	Q5T319	152 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	B4GALNT3	Q6L9W6	998 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	KSR2	Q6VAB6	950 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	XAGE3	Q8WTP9	111 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	DNAAF4	Q8WXU2	420 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	NHS	Q6T4R5	1651 aa		9.23	□□□□□ -0.93
GPATCH4-208	ENST00000497287	PXDNL	A1KZ92	1463 aa		9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	PI4KAP2	A4QPH2	592 aa		9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	ZBTB7B	O15156	539 aa	Predicted RBP	9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	AIMP1	Q12904	312 aa	Known RBP	9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	COPS6	Q7L5N1	327 aa		9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	RIC3	Q7Z5B4	369 aa		9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	NPM2	Q86SE8	214 aa	Known RBP	9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	PI4KAP1	Q8N8J0	262 aa		9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	SLC4A9	Q96Q91	983 aa		9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	ZBTB40	Q9NUA8	1239 aa		9.22	□□□□□ -0.93
GPATCH4-208	ENST00000497287	EP400	Q96L91	3159 aa		9.21	□□□□□ -0.93
GPATCH4-208	ENST00000497287	NBPF26	B4DH59	902 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	CYP19A1	P11511	503 aa	Predicted RBP	9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	NBPF14	Q5TI25	921 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	NBPF10	Q6P3W6	841 aa	Known RBP	9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	ANKRD13D	Q6ZTN6	518 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	LRP10	Q7Z4F1	713 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	NBPF15	Q8N660	670 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	SRCIN1	Q9C0H9	1055 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	MAP3K2	Q9Y2U5	619 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	BRWD3	Q6RI45	1802 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	SBF2	Q86WG5	1849 aa		9.21	□□□□□ -0.94
GPATCH4-208	ENST00000497287	ALDH1L1	O75891	902 aa		9.2	□□□□□ -0.94
GPATCH4-208	ENST00000497287	GNAI3	P08754	354 aa		9.2	□□□□□ -0.94
GPATCH4-208	ENST00000497287	HMGB2	P26583	209 aa	Known RBP	9.2	□□□□□ -0.94
GPATCH4-208	ENST00000497287	PIP4K2A	P48426	406 aa	Predicted RBP	9.2	□□□□□ -0.94
GPATCH4-208	ENST00000497287	NEXN	Q0ZGT2	675 aa		9.2	□□□□□ -0.94
GPATCH4-208	ENST00000497287	ADCY9	O60503	1353 aa		9.2	□□□□□ -0.94
GPATCH4-208	ENST00000497287	ATP10D	Q9P241	1426 aa		9.2	□□□□□ -0.94
GPATCH4-208	ENST00000497287	BTAF1	O14981	1849 aa		9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	IL6ST	P40189	918 aa	Predicted RBP	9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	BEND3	Q5T5X7	828 aa		9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	KIF6	Q6ZMV9	814 aa		9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	PLBD2	Q8NHP8	589 aa		9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	METTL22	Q9BUU2	404 aa	Predicted RBP	9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	RWDD1	Q9H446	243 aa	Predicted RBP	9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	CCDC87	Q9NVE4	849 aa		9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	ZNF831	Q5JPB2	1677 aa		9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	TJP1	Q07157	1748 aa		9.19	□□□□□ -0.94
GPATCH4-208	ENST00000497287	TRIM37	O94972	964 aa		9.18	□□□□□ -0.94
GPATCH4-208	ENST00000497287	GNAI2	P04899	355 aa		9.18	□□□□□ -0.94
GPATCH4-208	ENST00000497287	CRKL	P46109	303 aa	Known RBP	9.18	□□□□□ -0.94
GPATCH4-208	ENST00000497287	ITPK1	Q13572	414 aa		9.18	□□□□□ -0.94
GPATCH4-208	ENST00000497287	TTLL7	Q6ZT98	887 aa		9.18	□□□□□ -0.94
GPATCH4-208	ENST00000497287	CENPQ	Q7L2Z9	268 aa	Predicted RBP	9.18	□□□□□ -0.94
GPATCH4-208	ENST00000497287	PTF1A	Q7RTS3	328 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms