RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 ADGRB2O60241 1585 aa8.61□□□□□ -1.03
SIK3-213ENST00000497049 A0A0G2JS52 829 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 SPTLC1O15269 473 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 RGS20O76081 388 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 PSME1Q06323 249 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
SIK3-213ENST00000497049 RSBN1LQ6PCB5 846 aaPredicted RBP8.6□□□□□ -1.03
SIK3-213ENST00000497049 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 ZNF516Q92618 1163 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 CPSF1Q10570 1443 aaKnown RBP8.6□□□□□ -1.03
SIK3-213ENST00000497049 POLR3AO14802 1390 aaPredicted RBP8.6□□□□□ -1.03
SIK3-213ENST00000497049 BRD4O60885 1362 aaPredicted RBP8.6□□□□□ -1.03
SIK3-213ENST00000497049 ANKRD36BQ8N2N9 1353 aa8.6□□□□□ -1.03
SIK3-213ENST00000497049 C1orf167Q5SNV9 1468 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 FOXO3O43524 673 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 MYSM1Q5VVJ2 828 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 RIC3Q7Z5B4 369 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 PPIP5K1Q6PFW1 1433 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 NPC1L1Q9UHC9 1359 aa8.59□□□□□ -1.03
SIK3-213ENST00000497049 MST1RQ04912 1400 aa8.58□□□□□ -1.04
SIK3-213ENST00000497049 FYB1O15117 783 aa8.58□□□□□ -1.04
SIK3-213ENST00000497049 BRINP3Q76B58 766 aa8.58□□□□□ -1.04
SIK3-213ENST00000497049 KRT28Q7Z3Y7 464 aa8.58□□□□□ -1.04
SIK3-213ENST00000497049 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
SIK3-213ENST00000497049 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
SIK3-213ENST00000497049 SLC6A16Q9GZN6 736 aa8.58□□□□□ -1.04
SIK3-213ENST00000497049 ATP7BP35670 1465 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 CDC42BPGQ6DT37 1551 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 ANP32CO43423 234 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
SIK3-213ENST00000497049 MTMR2Q13614 643 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 RALBP1Q15311 655 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 SKIV2LQ15477 1246 aaKnown RBP8.57□□□□□ -1.04
SIK3-213ENST00000497049 ANP32EQ9BTT0 268 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 ZBTB3Q9H5J0 574 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
SIK3-213ENST00000497049 IQSEC2Q5JU85 1478 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
SIK3-213ENST00000497049 CGNL1Q0VF96 1302 aa8.56□□□□□ -1.04
SIK3-213ENST00000497049 TTC21BQ7Z4L5 1316 aa8.56□□□□□ -1.04
SIK3-213ENST00000497049 TTC21AQ8NDW8 1320 aa8.56□□□□□ -1.04
SIK3-213ENST00000497049 C6orf229H3BNL8 230 aa8.56□□□□□ -1.04
SIK3-213ENST00000497049 TLL1O43897 1013 aa8.56□□□□□ -1.04
SIK3-213ENST00000497049 A0A1W2PP64 1363 aa8.56□□□□□ -1.04
SIK3-213ENST00000497049 NPHP3Q7Z494 1330 aa8.55□□□□□ -1.04
SIK3-213ENST00000497049 SSH2Q76I76 1423 aa8.55□□□□□ -1.04
SIK3-213ENST00000497049 NDUFV2P19404 249 aa8.55□□□□□ -1.04
SIK3-213ENST00000497049 PRKRIP1Q9H875 184 aaPredicted RBP8.55□□□□□ -1.04
SIK3-213ENST00000497049 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
SIK3-213ENST00000497049 EDC4Q6P2E9 1401 aaKnown RBP8.54□□□□□ -1.04
SIK3-213ENST00000497049 UBAP1LF5GYI3 381 aa8.54□□□□□ -1.04
SIK3-213ENST00000497049 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
SIK3-213ENST00000497049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
SIK3-213ENST00000497049 XIRP1Q702N8 1843 aaKnown RBP8.54□□□□□ -1.04
SIK3-213ENST00000497049 NALCNQ8IZF0 1738 aa8.54□□□□□ -1.04
SIK3-213ENST00000497049 USP6P35125 1406 aa8.54□□□□□ -1.04
SIK3-213ENST00000497049 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
SIK3-213ENST00000497049 SBNO1A3KN83 1393 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 CC2D1BQ5T0F9 858 aaKnown RBP8.53□□□□□ -1.04
SIK3-213ENST00000497049 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 MORC1Q86VD1 984 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 NLRP13Q86W25 1043 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 ABTB2Q8N961 1025 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 ANKLE1Q8NAG6 615 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 NKX2-3Q8TAU0 364 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 HLA-CQ95604 372 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 LRRC59Q96AG4 307 aaKnown RBP8.53□□□□□ -1.04
SIK3-213ENST00000497049 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
SIK3-213ENST00000497049 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 FMN2Q9NZ56 1722 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 USP32Q8NFA0 1604 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 NSD3Q9BZ95 1437 aa8.53□□□□□ -1.04
SIK3-213ENST00000497049 NSD2O96028 1365 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 USP31Q70CQ4 1352 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 MMP16P51512 607 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 GUCA2AQ02747 115 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 NME9Q86XW9 330 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 COG3Q96JB2 828 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 GGNBP2Q9H3C7 697 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 SPATA31A3Q5VYP0 1347 aa8.52□□□□□ -1.05
SIK3-213ENST00000497049 CCER2I3L3R5 266 aa8.51□□□□□ -1.05
SIK3-213ENST00000497049 S1PR4O95977 384 aa8.51□□□□□ -1.05
SIK3-213ENST00000497049 DDX17Q92841 729 aaKnown RBP8.51□□□□□ -1.05
SIK3-213ENST00000497049 NUTM2BA6NNL0 878 aaPredicted RBP8.5□□□□□ -1.05
SIK3-213ENST00000497049 NUTM2EB1AL46 878 aaPredicted RBP8.5□□□□□ -1.05
SIK3-213ENST00000497049 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
SIK3-213ENST00000497049 JUNDP17535 347 aa8.5□□□□□ -1.05
SIK3-213ENST00000497049 PIP4K2BP78356 416 aa8.5□□□□□ -1.05
SIK3-213ENST00000497049 XPCQ01831 940 aaPredicted RBP8.5□□□□□ -1.05
SIK3-213ENST00000497049 NUTM2AQ8IVF1 878 aaPredicted RBP8.5□□□□□ -1.05
SIK3-213ENST00000497049 FAM160A2Q8N612 972 aaPredicted RBP8.5□□□□□ -1.05
SIK3-213ENST00000497049 KCNH5Q8NCM2 988 aa8.5□□□□□ -1.05
SIK3-213ENST00000497049 POLR3EQ9NVU0 708 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms