RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 NINLQ9Y2I6 1382 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 TTC21BQ7Z4L5 1316 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 JCADQ9P266 1359 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 RNF123Q5XPI4 1314 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 PRKAR2BP31323 418 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 AEBP1Q8IUX7 1158 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 PLEKHF1Q96S99 279 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 ORAI2Q96SN7 254 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 DLC1Q96QB1 1528 aa7.91□□□□□ -1.14
SSBP1-213ENST00000496622 HSP90AA2PQ14568 343 aaPredicted RBP7.9□□□□□ -1.14
SSBP1-213ENST00000496622 ESCO1Q5FWF5 840 aa7.9□□□□□ -1.14
SSBP1-213ENST00000496622 FAM43BQ6ZT52 329 aaPredicted RBP7.9□□□□□ -1.14
SSBP1-213ENST00000496622 GPIHBP1Q8IV16 184 aa7.9□□□□□ -1.14
SSBP1-213ENST00000496622 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.9□□□□□ -1.14
SSBP1-213ENST00000496622 SLIT1O75093 1534 aa7.9□□□□□ -1.15
SSBP1-213ENST00000496622 FOXO3O43524 673 aa7.9□□□□□ -1.15
SSBP1-213ENST00000496622 PRSS12P56730 875 aa7.9□□□□□ -1.15
SSBP1-213ENST00000496622 DDX17Q92841 729 aaKnown RBP7.9□□□□□ -1.15
SSBP1-213ENST00000496622 NKTRP30414 1462 aaKnown RBP7.9□□□□□ -1.15
SSBP1-213ENST00000496622 NSD2O96028 1365 aa7.9□□□□□ -1.15
SSBP1-213ENST00000496622 SPATA31A6Q5VVP1 1343 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 ZBTB7CA1YPR0 619 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 TRIM6-TRIM34B2RNG4 842 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 HMGB1P09429 215 aaKnown RBP7.89□□□□□ -1.15
SSBP1-213ENST00000496622 RGS3P49796 1198 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 RIPK4P57078 832 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 MMRN1Q13201 1228 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 DCTN1Q14203 1278 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 CRBNQ96SW2 442 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 TNNQ9UQP3 1299 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 LAS1LQ9Y4W2 734 aaKnown RBP7.89□□□□□ -1.15
SSBP1-213ENST00000496622 PLEKHG3A1L390 1219 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 FAM83GA6ND36 823 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 TMPOP42166 694 aaKnown RBP7.89□□□□□ -1.15
SSBP1-213ENST00000496622 FRAT1Q92837 279 aaPredicted RBP7.89□□□□□ -1.15
SSBP1-213ENST00000496622 CHD4Q14839 1912 aa7.89□□□□□ -1.15
SSBP1-213ENST00000496622 EDC4Q6P2E9 1401 aaKnown RBP7.88□□□□□ -1.15
SSBP1-213ENST00000496622 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-213ENST00000496622 TRMT2AQ8IZ69 625 aaKnown RBP7.88□□□□□ -1.15
SSBP1-213ENST00000496622 LTV1Q96GA3 475 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-213ENST00000496622 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-213ENST00000496622 ELL2O00472 640 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-213ENST00000496622 IL13P35225 146 aa7.88□□□□□ -1.15
SSBP1-213ENST00000496622 NUDT18Q6ZVK8 323 aa7.88□□□□□ -1.15
SSBP1-213ENST00000496622 ABTB2Q8N961 1025 aa7.88□□□□□ -1.15
SSBP1-213ENST00000496622 CLUAP1Q96AJ1 413 aa7.88□□□□□ -1.15
SSBP1-213ENST00000496622 MAPK8IP3Q9UPT6 1336 aa7.88□□□□□ -1.15
SSBP1-213ENST00000496622 E9PSI1 815 aa7.87□□□□□ -1.15
SSBP1-213ENST00000496622 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
SSBP1-213ENST00000496622 RRP9O43818 475 aaKnown RBP7.87□□□□□ -1.15
SSBP1-213ENST00000496622 NUTM2BA6NNL0 878 aaPredicted RBP7.87□□□□□ -1.15
SSBP1-213ENST00000496622 NUTM2EB1AL46 878 aaPredicted RBP7.87□□□□□ -1.15
SSBP1-213ENST00000496622 SULT6B1Q6IMI4 303 aa7.87□□□□□ -1.15
SSBP1-213ENST00000496622 PROSER2Q86WR7 435 aaPredicted RBP7.87□□□□□ -1.15
SSBP1-213ENST00000496622 NUTM2AQ8IVF1 878 aaPredicted RBP7.87□□□□□ -1.15
SSBP1-213ENST00000496622 KCTD12Q96CX2 325 aaKnown RBP7.87□□□□□ -1.15
SSBP1-213ENST00000496622 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
SSBP1-213ENST00000496622 MAP3K19Q56UN5 1328 aa7.87□□□□□ -1.15
SSBP1-213ENST00000496622 USP6P35125 1406 aa7.87□□□□□ -1.15
SSBP1-213ENST00000496622 EIF4A2Q14240 407 aaKnown RBP7.86□□□□□ -1.15
SSBP1-213ENST00000496622 SMYD5Q6GMV2 418 aa7.86□□□□□ -1.15
SSBP1-213ENST00000496622 RABGEF1Q9UJ41 708 aa7.86□□□□□ -1.15
SSBP1-213ENST00000496622 PANK1Q8TE04 598 aa7.86□□□□□ -1.15
SSBP1-213ENST00000496622 PHOX2BQ99453 314 aa7.86□□□□□ -1.15
SSBP1-213ENST00000496622 INSRP06213 1382 aa7.85□□□□□ -1.15
SSBP1-213ENST00000496622 CLSTN1O94985 981 aa7.85□□□□□ -1.15
SSBP1-213ENST00000496622 RBM6P78332 1123 aaKnown RBP7.85□□□□□ -1.15
SSBP1-213ENST00000496622 ZNF830Q96NB3 372 aaPredicted RBP7.85□□□□□ -1.15
SSBP1-213ENST00000496622 PNMA3Q9UL41 463 aa7.85□□□□□ -1.15
SSBP1-213ENST00000496622 STRCP1A6NGW2 1772 aa7.85□□□□□ -1.15
SSBP1-213ENST00000496622 COL3A1P02461 1466 aaPredicted RBP7.85□□□□□ -1.15
SSBP1-213ENST00000496622 SHPRHQ149N8 1683 aa7.85□□□□□ -1.15
SSBP1-213ENST00000496622 EXOSC9Q06265 439 aaKnown RBP7.85□□□□□ -1.15
SSBP1-213ENST00000496622 PSME1Q06323 249 aa7.85□□□□□ -1.15
SSBP1-213ENST00000496622 RTL5Q5HYW3 569 aaPredicted RBP7.85□□□□□ -1.15
SSBP1-213ENST00000496622 MRPL50Q8N5N7 158 aaKnown RBP7.85□□□□□ -1.15
SSBP1-213ENST00000496622 TK2O00142 265 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 FCHSD2O94868 740 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 USHBP1Q8N6Y0 703 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 COG6Q9Y2V7 657 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 PTCH1Q13635 1447 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 RLBP1P12271 317 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 AMPHP49418 695 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 BCAMP50895 628 aa7.84□□□□□ -1.15
SSBP1-213ENST00000496622 XIRP1Q702N8 1843 aaKnown RBP7.84□□□□□ -1.15
SSBP1-213ENST00000496622 GNPATO15228 680 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 HSPA6P17066 643 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 KRT24Q2M2I5 525 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 COL13A1Q5TAT6 717 aaPredicted RBP7.83□□□□□ -1.16
SSBP1-213ENST00000496622 MCM10Q7L590 875 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 ZC3H15Q8WU90 426 aaKnown RBP7.83□□□□□ -1.16
SSBP1-213ENST00000496622 TATDN2Q93075 761 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 MIS18AQ9NYP9 233 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 CDC42BPGQ6DT37 1551 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 RARSP54136 660 aaKnown RBP7.83□□□□□ -1.16
SSBP1-213ENST00000496622 TSPYL6Q8N831 410 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 ZFRQ96KR1 1074 aaKnown RBP7.83□□□□□ -1.16
SSBP1-213ENST00000496622 PLCD4Q9BRC7 762 aa7.83□□□□□ -1.16
SSBP1-213ENST00000496622 PATL2C9JE40 543 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms