RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
FN1-226ENST00000496542 PHACTR3Q96KR7 559 aa17.35■□□□□ 0.37
FN1-226ENST00000496542 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
FN1-226ENST00000496542 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
FN1-226ENST00000496542 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
FN1-226ENST00000496542 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
FN1-226ENST00000496542 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
FN1-226ENST00000496542 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.36
FN1-226ENST00000496542 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
FN1-226ENST00000496542 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
FN1-226ENST00000496542 FCHSD2O94868 740 aa17.32■□□□□ 0.36
FN1-226ENST00000496542 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
FN1-226ENST00000496542 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
FN1-226ENST00000496542 NARFQ9UHQ1 456 aa17.32■□□□□ 0.36
FN1-226ENST00000496542 CEMIPQ8WUJ3 1361 aa17.31■□□□□ 0.36
FN1-226ENST00000496542 HEG1Q9ULI3 1381 aa17.31■□□□□ 0.36
FN1-226ENST00000496542 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
FN1-226ENST00000496542 STARD3NLO95772 234 aa17.31■□□□□ 0.36
FN1-226ENST00000496542 ARFGEF1Q9Y6D6 1849 aa17.31■□□□□ 0.36
FN1-226ENST00000496542 TM4SF1P30408 202 aa17.3■□□□□ 0.36
FN1-226ENST00000496542 NFIXQ14938 502 aa17.3■□□□□ 0.36
FN1-226ENST00000496542 KCNA3P22001 575 aa17.29■□□□□ 0.36
FN1-226ENST00000496542 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
FN1-226ENST00000496542 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
FN1-226ENST00000496542 PIM2Q9P1W9 311 aa17.29■□□□□ 0.36
FN1-226ENST00000496542 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
FN1-226ENST00000496542 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
FN1-226ENST00000496542 KCNQ3O43525 872 aa17.28■□□□□ 0.36
FN1-226ENST00000496542 CHRNA5P30532 468 aa17.28■□□□□ 0.36
FN1-226ENST00000496542 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
FN1-226ENST00000496542 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
FN1-226ENST00000496542 A0A087WZG4 1122 aa17.27■□□□□ 0.36
FN1-226ENST00000496542 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
FN1-226ENST00000496542 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.36
FN1-226ENST00000496542 MCM10Q7L590 875 aa17.27■□□□□ 0.36
FN1-226ENST00000496542 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
FN1-226ENST00000496542 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.35
FN1-226ENST00000496542 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
FN1-226ENST00000496542 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
FN1-226ENST00000496542 SERPINB2P05120 415 aa17.25■□□□□ 0.35
FN1-226ENST00000496542 A1BGP04217 495 aa17.24■□□□□ 0.35
FN1-226ENST00000496542 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
FN1-226ENST00000496542 TBC1D2BQ9UPU7 963 aa17.24■□□□□ 0.35
FN1-226ENST00000496542 IL6STP40189 918 aaPredicted RBP17.23■□□□□ 0.35
FN1-226ENST00000496542 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
FN1-226ENST00000496542 CEP350Q5VT06 3117 aa17.23■□□□□ 0.35
FN1-226ENST00000496542 DLEC1Q9Y238 1755 aa17.23■□□□□ 0.35
FN1-226ENST00000496542 DLG5Q8TDM6 1919 aa17.22■□□□□ 0.35
FN1-226ENST00000496542 C9orf131Q5VYM1 1079 aa17.22■□□□□ 0.35
FN1-226ENST00000496542 TBC1D9BQ66K14 1250 aa17.22■□□□□ 0.35
FN1-226ENST00000496542 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
FN1-226ENST00000496542 NEFMP07197 916 aa17.21■□□□□ 0.35
FN1-226ENST00000496542 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.35
FN1-226ENST00000496542 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
FN1-226ENST00000496542 PRAMEF22A3QJZ6 481 aa17.2■□□□□ 0.34
FN1-226ENST00000496542 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
FN1-226ENST00000496542 C2CD5Q86YS7 1000 aa17.2■□□□□ 0.34
FN1-226ENST00000496542 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
FN1-226ENST00000496542 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
FN1-226ENST00000496542 SBF1O95248 1867 aa17.19■□□□□ 0.34
FN1-226ENST00000496542 KIF3CO14782 793 aa17.19■□□□□ 0.34
FN1-226ENST00000496542 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
FN1-226ENST00000496542 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
FN1-226ENST00000496542 DZIP3Q86Y13 1208 aaKnown RBP17.18■□□□□ 0.34
FN1-226ENST00000496542 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
FN1-226ENST00000496542 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
FN1-226ENST00000496542 H0YIN7 160 aa17.17■□□□□ 0.34
FN1-226ENST00000496542 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
FN1-226ENST00000496542 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
FN1-226ENST00000496542 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
FN1-226ENST00000496542 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
FN1-226ENST00000496542 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
FN1-226ENST00000496542 NPHP1O15259 732 aa17.16■□□□□ 0.34
FN1-226ENST00000496542 RASSF7Q02833 373 aa17.16■□□□□ 0.34
FN1-226ENST00000496542 PRR5LQ6MZQ0 368 aa17.16■□□□□ 0.34
FN1-226ENST00000496542 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
FN1-226ENST00000496542 NMRK2Q9NPI5 230 aa17.16■□□□□ 0.34
FN1-226ENST00000496542 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
FN1-226ENST00000496542 NFE2L2Q16236 605 aa17.15■□□□□ 0.34
FN1-226ENST00000496542 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
FN1-226ENST00000496542 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
FN1-226ENST00000496542 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
FN1-226ENST00000496542 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
FN1-226ENST00000496542 PDE6BP35913 854 aa17.14■□□□□ 0.33
FN1-226ENST00000496542 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
FN1-226ENST00000496542 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
FN1-226ENST00000496542 BRIP1Q9BX63 1249 aa17.14■□□□□ 0.33
FN1-226ENST00000496542 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
FN1-226ENST00000496542 HSPA6P17066 643 aa17.13■□□□□ 0.33
FN1-226ENST00000496542 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
FN1-226ENST00000496542 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
FN1-226ENST00000496542 PNNQ9H307 717 aaKnown RBP17.13■□□□□ 0.33
FN1-226ENST00000496542 ZNF652Q9Y2D9 606 aa17.13■□□□□ 0.33
FN1-226ENST00000496542 CCDC88AQ3V6T2 1871 aa17.13■□□□□ 0.33
FN1-226ENST00000496542 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
FN1-226ENST00000496542 ST5P78524 1137 aa17.12■□□□□ 0.33
FN1-226ENST00000496542 RALBP1Q15311 655 aa17.12■□□□□ 0.33
FN1-226ENST00000496542 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
FN1-226ENST00000496542 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
FN1-226ENST00000496542 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms